Name aoPNDmLZls4n7Olcko1bjSoqABFKDmABFKDmyeZQDmeeKKDmmaUQGm_1
Workunit 2388057
Created 9 Feb 2024, 19:26:01 UTC
Sent 9 Feb 2024, 21:14:50 UTC
Report deadline 16 Feb 2024, 21:14:50 UTC
Received 9 Feb 2024, 21:45:10 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4911
Run time 15 min 52 sec
CPU time 7 min 17 sec
Validate state Valid
Credit 17.59
Device peak FLOPS 8.00 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.51 GB
Peak swap size 2.12 GB
Peak disk usage 79.19 MB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
16:28:04 (4059293): wrapper (7.7.26015): starting
16:28:04 (4059293): wrapper: running run_atlas (--nthreads 1)
[2024-02-09 16:28:04] Arguments: --nthreads 1
[2024-02-09 16:28:04] Threads: 1
[2024-02-09 16:28:04] Checking for CVMFS
[2024-02-09 16:28:06] Probing /cvmfs/atlas.cern.ch... OK
[2024-02-09 16:28:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-02-09 16:28:07] Running cvmfs_config stat atlas.cern.ch
[2024-02-09 16:28:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-02-09 16:28:08] 2.9.2.0 4059499 0 24624 129207 3 1 3216978 4194305 0 130560 0 0 0.000 963 3402 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2024-02-09 16:28:08] CVMFS is ok
[2024-02-09 16:28:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-02-09 16:28:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-02-09 16:28:08] Small home clusters do not require a local http proxy but it is suggested if
[2024-02-09 16:28:08] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-02-09 16:28:08] Further information can be found at the LHC@home message board.
[2024-02-09 16:28:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-02-09 16:28:08] Checking for apptainer binary...
[2024-02-09 16:28:08] apptainer is not installed, using version from CVMFS
[2024-02-09 16:28:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-02-09 16:28:08] WC5950
[2024-02-09 16:28:08] apptainer works
[2024-02-09 16:28:08] Starting ATLAS job with PandaID=6104033143
[2024-02-09 16:28:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/39 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-02-09 16:43:53]  *** The last 200 lines of the pilot log: ***
[2024-02-09 16:43:53] 2024-02-09 21:43:32,123 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file: /var/lib/boinc-client/slots/39/heartbeat.json
[2024-02-09 16:43:53] 2024-02-09 21:43:32,123 | DEBUG    | pilot.control.job                | queue_monitor             | job.completed=False
[2024-02-09 16:43:53] 2024-02-09 21:43:32,188 | INFO     | pilot.control.job                | make_job_report           | 
[2024-02-09 16:43:53] 2024-02-09 21:43:32,188 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2024-02-09 16:43:53] 2024-02-09 21:43:32,188 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2024-02-09 16:43:53] 2024-02-09 21:43:32,188 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 6104033143
[2024-02-09 16:43:53] 2024-02-09 21:43:32,188 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2024-02-09 16:43:53] 2024-02-09 21:43:32,188 | INFO     | pilot.control.job                | make_job_report           | errors: (none)
[2024-02-09 16:43:53] 2024-02-09 21:43:32,188 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2024-02-09 16:43:53] 2024-02-09 21:43:32,188 | INFO     | pilot.control.job                | make_job_report           | pilot state: finished 
[2024-02-09 16:43:53] 2024-02-09 21:43:32,188 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 0
[2024-02-09 16:43:53] 2024-02-09 21:43:32,188 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2024-02-09 16:43:53] 2024-02-09 21:43:32,188 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2024-02-09 16:43:53] 2024-02-09 21:43:32,188 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2024-02-09 16:43:53] 2024-02-09 21:43:32,188 | INFO     | pilot.control.job                | make_job_report           | exitmsg: OK
[2024-02-09 16:43:53] 2024-02-09 21:43:32,188 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 439 s
[2024-02-09 16:43:53] 2024-02-09 21:43:32,188 | INFO     | pilot.control.job                | make_job_report           | nevents: 2
[2024-02-09 16:43:53] 2024-02-09 21:43:32,188 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2024-02-09 16:43:53] 2024-02-09 21:43:32,188 | INFO     | pilot.control.job                | make_job_report           | pid: 4070786
[2024-02-09 16:43:53] 2024-02-09 21:43:32,189 | INFO     | pilot.control.job                | make_job_report           | pgrp: 4070786
[2024-02-09 16:43:53] 2024-02-09 21:43:32,189 | INFO     | pilot.control.job                | make_job_report           | corecount: 1
[2024-02-09 16:43:53] 2024-02-09 21:43:32,189 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2024-02-09 16:43:53] 2024-02-09 21:43:32,189 | INFO     | pilot.control.job                | make_job_report           | sizes: {0: 2407282, 4: 2407488, 11: 2407516, 871: 2427177, 872: 2436343, 886: 2436509}
[2024-02-09 16:43:53] 2024-02-09 21:43:32,189 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2024-02-09 16:43:53] 2024-02-09 21:43:32,189 | INFO     | pilot.control.job                | make_job_report           | 
[2024-02-09 16:43:53] 2024-02-09 21:43:32,189 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /var/lib/boinc-client/slots/39:
[2024-02-09 16:43:53] 
[2024-02-09 16:43:53] 2024-02-09 21:43:32,189 | INFO     | pilot.util.container             | print_executable          | executing command: ls -lF /var/lib/boinc-client/slots/39
[2024-02-09 16:43:53] 2024-02-09 21:43:32,200 | DEBUG    | pilot.util.container             | execute                   | subprocess.communicate() will use timeout 864000 s
[2024-02-09 16:43:53] 2024-02-09 21:43:32,217 | DEBUG    | pilot.control.job                | has_job_completed         | total 42940
[2024-02-09 16:43:53] -rw------- 1 boinc boinc   415108 Feb  9 16:43 95663096-b7bd-4730-adb7-f9cb131c7033_66517.job.log
[2024-02-09 16:43:53] -rw------- 1 boinc boinc   169878 Feb  9 16:43 95663096-b7bd-4730-adb7-f9cb131c7033_66517.job.log.tgz
[2024-02-09 16:43:53] -rw------- 1 boinc boinc        0 Feb  9 16:28 agis_ddmendpoints.agis.ALL.json
[2024-02-09 16:43:53] -rw------- 1 boinc boinc   956163 Feb  9 16:28 agis_schedconf.cvmfs.json
[2024-02-09 16:43:53] -rw------- 1 boinc boinc      129 Feb  9 16:28 aoPNDmLZls4n7Olcko1bjSoqABFKDmABFKDmyeZQDmeeKKDmmaUQGm.diag
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc        0 Feb  9 16:28 boinc_lockfile
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc     8192 Feb  9 16:43 boinc_mmap_file
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc      532 Feb  9 16:43 boinc_task_state.xml
[2024-02-09 16:43:53] -rw------- 1 boinc boinc  1341937 Feb  9 16:28 cric_ddmendpoints.json
[2024-02-09 16:43:53] -rw-r--r-- 2 boinc boinc 37620382 Feb  9 16:28 EVNT.04972714._000038.pool.root.1
[2024-02-09 16:43:53] -rw------- 1 boinc boinc     6658 Feb  9 16:43 heartbeat.json
[2024-02-09 16:43:53] -rw------- 1 boinc boinc  1893025 Feb  9 16:43 Hits.hc_20285871.BOINC-TEST.95663096-b7bd-4730-adb7-f9cb131c7033_66517.HITS.pool.root
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc     9513 Feb  9 16:28 init_data.xml
[2024-02-09 16:43:53] -rw-r--r-- 2 boinc boinc   501749 Feb  9 16:28 input.tar.gz
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc      112 Feb  9 16:28 job.xml
[2024-02-09 16:43:53] -rw------- 1 boinc boinc     1000 Feb  9 16:43 memory_monitor_summary.json
[2024-02-09 16:43:53] -rw------- 1 boinc boinc      508 Feb  9 16:43 output.list
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc     2706 Feb  9 16:28 pandaJob.out
[2024-02-09 16:43:53] drwxrwx--- 2 boinc boinc     4096 Feb  9 16:43 PanDA_Pilot-6104033143/
[2024-02-09 16:43:53] drwx------ 5 boinc boinc     4096 Feb  9 16:28 pilot3/
[2024-02-09 16:43:53] -rw------- 1 boinc boinc   489800 Feb  9 14:18 pilot3.tar.gz
[2024-02-09 16:43:53] -rw------- 1 boinc boinc       95 Feb  9 16:42 pilot_heartbeat.json
[2024-02-09 16:43:53] -rw------- 1 boinc boinc   386008 Feb  9 16:43 pilotlog.txt
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc     4388 Feb  9 14:18 queuedata.json
[2024-02-09 16:43:53] -rwxr-xr-x 1 boinc boinc     7986 Feb  9 16:28 run_atlas*
[2024-02-09 16:43:53] -rwx------ 1 boinc boinc    31343 Feb  9 14:18 runpilot2-wrapper.sh*
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc      407 Feb  9 16:28 runtime_log
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc     7853 Feb  9 16:28 runtime_log.err
[2024-02-09 16:43:53] -rw------- 1 boinc boinc      424 Feb  9 16:28 setup.sh.local
[2024-02-09 16:43:53] drwxrwx--x 2 boinc boinc     4096 Feb  9 16:28 shared/
[2024-02-09 16:43:53] -rw-r--r-- 2 boinc boinc    17638 Feb  9 16:28 start_atlas.sh
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc     2158 Feb  9 16:28 stderr.txt
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc      107 Feb  9 16:28 wrapper_26015_x86_64-pc-linux-gnu
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc       24 Feb  9 16:43 wrapper_checkpoint.txt
[2024-02-09 16:43:53] 2024-02-09 21:43:32,217 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs had 0 job(s) [purged]
[2024-02-09 16:43:53] 2024-02-09 21:43:32,217 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads had 0 job(s) [purged]
[2024-02-09 16:43:53] 2024-02-09 21:43:32,217 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in had 0 job(s) [purged]
[2024-02-09 16:43:53] 2024-02-09 21:43:32,217 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out had 0 job(s) [purged]
[2024-02-09 16:43:53] 2024-02-09 21:43:32,217 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in had 0 job(s) [purged]
[2024-02-09 16:43:53] 2024-02-09 21:43:32,217 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs had 0 job(s) [purged]
[2024-02-09 16:43:53] 2024-02-09 21:43:32,217 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads had 0 job(s) [purged]
[2024-02-09 16:43:53] 2024-02-09 21:43:32,217 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads had 0 job(s) [purged]
[2024-02-09 16:43:53] 2024-02-09 21:43:32,217 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs had 0 job(s) [purged]
[2024-02-09 16:43:53] 2024-02-09 21:43:32,217 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads had 0 job(s) [purged]
[2024-02-09 16:43:53] 2024-02-09 21:43:32,217 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in had 1 job(s) [purged]
[2024-02-09 16:43:53] 2024-02-09 21:43:32,217 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out had 0 job(s) [purged]
[2024-02-09 16:43:53] 2024-02-09 21:43:32,218 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs had 0 job(s) [purged]
[2024-02-09 16:43:53] 2024-02-09 21:43:32,218 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads had 0 job(s) [purged]
[2024-02-09 16:43:53] 2024-02-09 21:43:32,218 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in had 0 job(s) [purged]
[2024-02-09 16:43:53] 2024-02-09 21:43:32,218 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out had 0 job(s) [purged]
[2024-02-09 16:43:53] 2024-02-09 21:43:32,218 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs had 0 job(s) [purged]
[2024-02-09 16:43:53] 2024-02-09 21:43:32,218 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2024-02-09 16:43:53] 2024-02-09 21:43:32,218 | INFO     | pilot.util.queuehandling         | queue_report              | queue realtimelog_payloads had 0 job(s) [purged]
[2024-02-09 16:43:53] 2024-02-09 21:43:32,218 | INFO     | pilot.util.queuehandling         | queue_report              | queue messages had 0 job(s) [purged]
[2024-02-09 16:43:53] 2024-02-09 21:43:32,218 | INFO     | pilot.control.job                | has_job_completed         | job 6104033143 has completed (purged errors)
[2024-02-09 16:43:53] 2024-02-09 21:43:32,218 | DEBUG    | pilot.util.realtimelogger        | cleanup                   | attempting real-time logger cleanup
[2024-02-09 16:43:53] 2024-02-09 21:43:32,218 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2024-02-09 16:43:53] 2024-02-09 21:43:32,219 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /var/lib/boinc-client/slots/39/PanDA_Pilot-6104033143
[2024-02-09 16:43:53] 2024-02-09 21:43:33,224 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [4070786]
[2024-02-09 16:43:53] 2024-02-09 21:43:33,224 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector waiting for pid 4070786
[2024-02-09 16:43:53] 2024-02-09 21:43:33,224 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-02-09 16:43:53] 2024-02-09 21:43:34,232 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2024-02-09 16:43:53] 2024-02-09 21:43:34,232 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=4070786
[2024-02-09 16:43:53] 2024-02-09 21:43:34,236 | DEBUG    | pilot.control.monitor            | run_checks                | pilot heartbeat file was last updated 60.175559759140015 s ago (time to update)
[2024-02-09 16:43:53] 2024-02-09 21:43:34,237 | DEBUG    | pilot.util.heartbeat             | update_pilot_heartbeat    | no job suspension detected
[2024-02-09 16:43:53] 2024-02-09 21:43:34,237 | DEBUG    | pilot.util.heartbeat             | update_pilot_heartbeat    | updated pilot heartbeat file: /var/lib/boinc-client/slots/39/pilot_heartbeat.json
[2024-02-09 16:43:53] 2024-02-09 21:43:34,239 | DEBUG    | pilot.util.container             | execute                   | subprocess.communicate() will use timeout 864000 s
[2024-02-09 16:43:53] 2024-02-09 21:43:34,289 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [4070786] (in reverse order)
[2024-02-09 16:43:53] 2024-02-09 21:43:34,299 | DEBUG    | pilot.util.container             | execute                   | subprocess.communicate() will use timeout 864000 s
[2024-02-09 16:43:53] 2024-02-09 21:43:34,336 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2024-02-09 16:43:53] 2024-02-09 21:43:34,336 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2024-02-09 16:43:53] 2024-02-09 21:43:34,339 | INFO     | pilot.util.processes             | kill_defunct_children     | did not find any defunct processes belonging to 4070786
[2024-02-09 16:43:53] 2024-02-09 21:43:34,341 | INFO     | pilot.util.processes             | kill_defunct_children     | did not find any defunct processes belonging to 4070786
[2024-02-09 16:43:53] 2024-02-09 21:43:34,341 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2024-02-09 16:43:53] 2024-02-09 21:43:34,341 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2024-02-09 16:43:53] 2024-02-09 21:43:34,342 | INFO     | root                             | retrieve                  | pilot has finished with previous job - re-establishing logging
[2024-02-09 16:43:53] 2024-02-09 21:43:34,342 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | **************************************
[2024-02-09 16:43:53] 2024-02-09 21:43:34,342 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 3.7.1.50  ***
[2024-02-09 16:43:53] 2024-02-09 21:43:34,342 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | **************************************
[2024-02-09 16:43:53] 2024-02-09 21:43:34,342 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2024-02-09 16:43:53] 2024-02-09 21:43:34,365 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2024-02-09 16:43:53] 2024-02-09 21:43:34,365 | INFO     | pilot.util.container             | print_executable          | executing command: cat /etc/os-release
[2024-02-09 16:43:53] 2024-02-09 21:43:34,368 | DEBUG    | pilot.util.container             | execute                   | subprocess.communicate() will use timeout 864000 s
[2024-02-09 16:43:53] 2024-02-09 21:43:34,373 | INFO     | pilot.util.filehandling          | dump                      | cat /etc/os-release:
[2024-02-09 16:43:53] NAME="CentOS Linux"
[2024-02-09 16:43:53] VERSION="7 (Core)"
[2024-02-09 16:43:53] ID="centos"
[2024-02-09 16:43:53] ID_LIKE="rhel fedora"
[2024-02-09 16:43:53] VERSION_ID="7"
[2024-02-09 16:43:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-02-09 16:43:53] ANSI_COLOR="0;31"
[2024-02-09 16:43:53] CPE_NAME="cpe:/o:centos:centos:7"
[2024-02-09 16:43:53] HOME_URL="https://www.centos.org/"
[2024-02-09 16:43:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-02-09 16:43:53] 
[2024-02-09 16:43:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-02-09 16:43:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-02-09 16:43:53] REDHAT_SUPPORT_PRODUCT="centos"
[2024-02-09 16:43:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-02-09 16:43:53] 
[2024-02-09 16:43:53] 2024-02-09 21:43:34,373 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | **************************************
[2024-02-09 16:43:53] 2024-02-09 21:43:34,875 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /var/lib/boinc-client/slots/39
[2024-02-09 16:43:53] 2024-02-09 21:43:34,875 | INFO     | pilot.util.container             | print_executable          | executing command: df -mP /var/lib/boinc-client/slots/39
[2024-02-09 16:43:53] 2024-02-09 21:43:34,883 | DEBUG    | pilot.util.container             | execute                   | subprocess.communicate() will use timeout 864000 s
[2024-02-09 16:43:53] 2024-02-09 21:43:34,890 | DEBUG    | pilot.util.workernode            | get_local_disk_space      | stdout=Filesystem     1048576-blocks  Used Available Capacity Mounted on
[2024-02-09 16:43:53] /dev/nvme0n1p2         467851 92846    351169      21% /var/lib/boinc-client/slots/39
[2024-02-09 16:43:53] 2024-02-09 21:43:34,890 | DEBUG    | pilot.util.workernode            | get_local_disk_space      | stderr=
[2024-02-09 16:43:53] 2024-02-09 21:43:34,890 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (368227385344 B)
[2024-02-09 16:43:53] 2024-02-09 21:43:34,890 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2024-02-09 16:43:53] 2024-02-09 21:43:34,890 | WARNING  | pilot.control.job                | retrieve                  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-02-09 16:43:53] 2024-02-09 21:43:34,891 | WARNING  | pilot.control.monitor            | control                   | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-02-09 16:43:53] 2024-02-09 21:43:34,891 | INFO     | pilot.util.queuehandling         | abort_jobs_in_queues      | found 0 job(s) in 20 queues
[2024-02-09 16:43:53] 2024-02-09 21:43:34,891 | WARNING  | pilot.control.monitor            | run_checks                | pilot monitor received instruction that args.graceful_stop has been set
[2024-02-09 16:43:53] 2024-02-09 21:43:34,891 | WARNING  | pilot.control.monitor            | run_checks                | will wait for a maximum of 300 s for threads to finish
[2024-02-09 16:43:53] 2024-02-09 21:43:35,052 | INFO     | pilot.control.payload            | control                   | all payload control threads have been joined
[2024-02-09 16:43:53] 2024-02-09 21:43:35,052 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2024-02-09 16:43:53] 2024-02-09 21:43:35,183 | INFO     | pilot.control.data               | control                   | all data control threads have been joined
[2024-02-09 16:43:53] 2024-02-09 21:43:35,183 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2024-02-09 16:43:53] 2024-02-09 21:43:35,352 | WARNING  | pilot.util.common                | should_abort              | job:job_monitor:received graceful stop - abort after this iteration
[2024-02-09 16:43:53] 2024-02-09 21:43:35,352 | INFO     | pilot.control.job                | job_monitor               | aborting loop
[2024-02-09 16:43:53] 2024-02-09 21:43:35,568 | INFO     | pilot.control.job                | control                   | all job control threads have been joined
[2024-02-09 16:43:53] 2024-02-09 21:43:35,568 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2024-02-09 16:43:53] 2024-02-09 21:43:35,896 | INFO     | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2024-02-09 16:43:53] 2024-02-09 21:43:36,056 | INFO     | pilot.control.payload            | control                   | [payload] control thread has finished
[2024-02-09 16:43:53] 2024-02-09 21:43:36,080 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2024-02-09 16:43:53] 2024-02-09 21:43:36,188 | INFO     | pilot.control.data               | control                   | [data] control thread has finished
[2024-02-09 16:43:53] 2024-02-09 21:43:36,300 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2024-02-09 16:43:53] 2024-02-09 21:43:36,356 | INFO     | pilot.control.job                | job_monitor               | [job] job monitor thread has finished
[2024-02-09 16:43:53] 2024-02-09 21:43:36,480 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2024-02-09 16:43:53] 2024-02-09 21:43:36,484 | INFO     | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2024-02-09 16:43:53] 2024-02-09 21:43:36,572 | INFO     | pilot.control.job                | control                   | [job] control thread has finished
[2024-02-09 16:43:53] 2024-02-09 21:43:36,752 | INFO     | pilot.control.job                | validate                  | [job] validate thread has finished
[2024-02-09 16:43:53] 2024-02-09 21:43:36,936 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2024-02-09 16:43:53] 2024-02-09 21:43:37,024 | INFO     | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2024-02-09 16:43:53] 2024-02-09 21:43:37,196 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2024-02-09 16:43:53] 2024-02-09 21:43:37,308 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2024-02-09 16:43:53] 2024-02-09 21:43:37,632 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-02-09 16:43:53] 2024-02-09 21:43:38,104 | INFO     | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2024-02-09 16:43:53] 2024-02-09 21:43:38,200 | INFO     | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2024-02-09 16:43:53] 2024-02-09 21:43:41,644 | INFO     | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2024-02-09 16:43:53] 2024-02-09 21:43:45,920 | INFO     | pilot.control.payload            | get_logging_info          | job.realtimelogging is not enabled
[2024-02-09 16:43:53] 2024-02-09 21:43:45,920 | DEBUG    | pilot.control.payload            | run_realtimelog           | real-time logging not needed at this point
[2024-02-09 16:43:53] 2024-02-09 21:43:45,920 | DEBUG    | pilot.control.payload            | run_realtimelog           | realtime logger was not found, waiting ..
[2024-02-09 16:43:53] 2024-02-09 21:43:46,924 | INFO     | pilot.control.payload            | run_realtimelog           | [payload] run_realtimelog thread has finished
[2024-02-09 16:43:53] 2024-02-09 21:43:48,240 | INFO     | pilot.util.processes             | threads_aborted           | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140503
[2024-02-09 16:43:53] 2024-02-09 21:43:48,240 | DEBUG    | pilot.workflow.generic           | run                       | will proceed to set job_aborted
[2024-02-09 16:43:53] 2024-02-09 21:43:48,948 | WARNING  | pilot.control.monitor            | run_checks                | job_aborted has been set - aborting pilot monitoring
[2024-02-09 16:43:53] 2024-02-09 21:43:48,948 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2024-02-09 16:43:53] 2024-02-09 21:43:53,264 | DEBUG    | pilot.workflow.generic           | run                       | all relevant threads have aborted (thread count=1)
[2024-02-09 16:43:53] 2024-02-09 21:43:53,264 | INFO     | pilot.workflow.generic           | run                       | all workflow threads have been joined
[2024-02-09 16:43:53] 2024-02-09 21:43:53,264 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2024-02-09 16:43:53] 2024-02-09 21:43:53,300 | DEBUG    | pilot.util.processgroups         | get_all_child_pids        | python3(4063590)---pstree(4080729)
[2024-02-09 16:43:53] 
[2024-02-09 16:43:53] 2024-02-09 21:43:53,301 | INFO     | pilot.util.processgroups         | find_defunct_subprocesses | child pids=[4063590, 4080729]
[2024-02-09 16:43:53] 2024-02-09 21:43:53,345 | DEBUG    | pilot.util.processgroups         | is_defunct                | 4063590: return code=0, stdout=SN
[2024-02-09 16:43:53] , stderr=
[2024-02-09 16:43:53] 2024-02-09 21:43:53,398 | DEBUG    | pilot.util.processgroups         | is_defunct                | 4080729: return code=1, stdout=, stderr=
[2024-02-09 16:43:53] 2024-02-09 21:43:53,398 | INFO     | root                             | list_zombies              | no defunct processes were found
[2024-02-09 16:43:53] 2024-02-09 21:43:53,398 | INFO     | root                             | get_proper_exit_code      | traces error code: 0
[2024-02-09 16:43:53] 2024-02-09 21:43:53,398 | INFO     | root                             | wrap_up                   | pilot has finished (exit code=0, shell exit code=0)
[2024-02-09 16:43:53] 2024-02-09 21:43:53,434 [wrapper] ==== pilot stdout END ====
[2024-02-09 16:43:53] 2024-02-09 21:43:53,446 [wrapper] ==== wrapper stdout RESUME ====
[2024-02-09 16:43:53] 2024-02-09 21:43:53,454 [wrapper] pilotpid: 4063590
[2024-02-09 16:43:53] 2024-02-09 21:43:53,462 [wrapper] Pilot exit status: 0
[2024-02-09 16:43:53] 2024-02-09 21:43:53,497 [wrapper] pandaids: 6104033143
[2024-02-09 16:43:53] 2024-02-09 21:43:53,538 [wrapper] cleanup: SIGTERM to supervisor_pilot 4080019 4063591
[2024-02-09 16:43:53] 2024-02-09 21:43:53,550 [wrapper] Test setup, not cleaning
[2024-02-09 16:43:53] 2024-02-09 21:43:53,561 [wrapper] ==== wrapper stdout END ====
[2024-02-09 16:43:53] 2024-02-09 21:43:53,570 [wrapper] ==== wrapper stderr END ====
[2024-02-09 16:43:53] 2024-02-09 21:43:53,581 [wrapper] apfmon messages muted
[2024-02-09 16:43:53]  *** Error codes and diagnostics ***
[2024-02-09 16:43:53]     "exeErrorCode": 0,
[2024-02-09 16:43:53]     "exeErrorDiag": "",
[2024-02-09 16:43:53]     "pilotErrorCode": 0,
[2024-02-09 16:43:53]     "pilotErrorDiag": "",
[2024-02-09 16:43:53]  *** Listing of results directory ***
[2024-02-09 16:43:53] total 43228
[2024-02-09 16:43:53] -rwx------ 1 boinc boinc    31343 Feb  9 14:18 runpilot2-wrapper.sh
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc     4388 Feb  9 14:18 queuedata.json
[2024-02-09 16:43:53] -rw------- 1 boinc boinc   489800 Feb  9 14:18 pilot3.tar.gz
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc      107 Feb  9 16:28 wrapper_26015_x86_64-pc-linux-gnu
[2024-02-09 16:43:53] -rwxr-xr-x 1 boinc boinc     7986 Feb  9 16:28 run_atlas
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc      112 Feb  9 16:28 job.xml
[2024-02-09 16:43:53] -rw-r--r-- 2 boinc boinc    17638 Feb  9 16:28 start_atlas.sh
[2024-02-09 16:43:53] drwxrwx--x 2 boinc boinc     4096 Feb  9 16:28 shared
[2024-02-09 16:43:53] -rw-r--r-- 2 boinc boinc   501749 Feb  9 16:28 input.tar.gz
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc     9513 Feb  9 16:28 init_data.xml
[2024-02-09 16:43:53] -rw-r--r-- 2 boinc boinc 37620382 Feb  9 16:28 EVNT.04972714._000038.pool.root.1
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc        0 Feb  9 16:28 boinc_lockfile
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc     2706 Feb  9 16:28 pandaJob.out
[2024-02-09 16:43:53] -rw------- 1 boinc boinc      424 Feb  9 16:28 setup.sh.local
[2024-02-09 16:43:53] -rw------- 1 boinc boinc   956163 Feb  9 16:28 agis_schedconf.cvmfs.json
[2024-02-09 16:43:53] -rw------- 1 boinc boinc        0 Feb  9 16:28 agis_ddmendpoints.agis.ALL.json
[2024-02-09 16:43:53] -rw------- 1 boinc boinc  1341937 Feb  9 16:28 cric_ddmendpoints.json
[2024-02-09 16:43:53] drwx------ 5 boinc boinc     4096 Feb  9 16:28 pilot3
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc      532 Feb  9 16:43 boinc_task_state.xml
[2024-02-09 16:43:53] -rw------- 1 boinc boinc  1893025 Feb  9 16:43 Hits.hc_20285871.BOINC-TEST.95663096-b7bd-4730-adb7-f9cb131c7033_66517.HITS.pool.root
[2024-02-09 16:43:53] -rw------- 1 boinc boinc     1000 Feb  9 16:43 memory_monitor_summary.json
[2024-02-09 16:43:53] -rw------- 1 boinc boinc   169878 Feb  9 16:43 95663096-b7bd-4730-adb7-f9cb131c7033_66517.job.log.tgz
[2024-02-09 16:43:53] -rw------- 1 boinc boinc     6658 Feb  9 16:43 heartbeat.json
[2024-02-09 16:43:53] -rw------- 1 boinc boinc       95 Feb  9 16:43 pilot_heartbeat.json
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc     8192 Feb  9 16:43 boinc_mmap_file
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc       24 Feb  9 16:43 wrapper_checkpoint.txt
[2024-02-09 16:43:53] -rw------- 1 boinc boinc     9979 Feb  9 16:43 pilotlog.txt
[2024-02-09 16:43:53] -rw------- 1 boinc boinc   434322 Feb  9 16:43 95663096-b7bd-4730-adb7-f9cb131c7033_66517.job.log
[2024-02-09 16:43:53] -rw------- 1 boinc boinc      510 Feb  9 16:43 output.list
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc      680 Feb  9 16:43 runtime_log
[2024-02-09 16:43:53] -rw------- 1 boinc boinc   624640 Feb  9 16:43 result.tar.gz
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc    11650 Feb  9 16:43 runtime_log.err
[2024-02-09 16:43:53] -rw------- 1 boinc boinc      623 Feb  9 16:43 aoPNDmLZls4n7Olcko1bjSoqABFKDmABFKDmyeZQDmeeKKDmmaUQGm.diag
[2024-02-09 16:43:53] -rw-r--r-- 1 boinc boinc    29620 Feb  9 16:43 stderr.txt
[2024-02-09 16:43:53] HITS file was successfully produced:
[2024-02-09 16:43:53] -rw------- 1 boinc boinc 1893025 Feb  9 16:43 shared/HITS.pool.root.1
[2024-02-09 16:43:53]  *** Contents of shared directory: ***
[2024-02-09 16:43:53] total 39720
[2024-02-09 16:43:53] -rw-r--r-- 2 boinc boinc    17638 Feb  9 16:28 start_atlas.sh
[2024-02-09 16:43:53] -rw-r--r-- 2 boinc boinc   501749 Feb  9 16:28 input.tar.gz
[2024-02-09 16:43:53] -rw-r--r-- 2 boinc boinc 37620382 Feb  9 16:28 ATLAS.root_0
[2024-02-09 16:43:53] -rw------- 1 boinc boinc  1893025 Feb  9 16:43 HITS.pool.root.1
[2024-02-09 16:43:53] -rw------- 1 boinc boinc   624640 Feb  9 16:43 result.tar.gz
16:43:55 (4059293): run_atlas exited; CPU time 437.335646
16:43:55 (4059293): called boinc_finish(0)

</stderr_txt>
]]>


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