Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
22:27:10 (243243): wrapper (7.7.26015): starting
22:27:10 (243243): wrapper: running run_atlas (--nthreads 1)
[2024-02-09 22:27:10] Arguments: --nthreads 1
[2024-02-09 22:27:10] Threads: 1
[2024-02-09 22:27:10] Checking for CVMFS
[2024-02-09 22:27:10] Probing /cvmfs/atlas.cern.ch... OK
[2024-02-09 22:27:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-02-09 22:27:10] Running cvmfs_config stat atlas.cern.ch
[2024-02-09 22:27:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-02-09 22:27:11] 2.9.2.0 224512 12 38672 129214 3 74 3407559 4194305 671 130560 0 53519 100.000 2 1 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2024-02-09 22:27:11] CVMFS is ok
[2024-02-09 22:27:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-02-09 22:27:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-02-09 22:27:11] Small home clusters do not require a local http proxy but it is suggested if
[2024-02-09 22:27:11] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-02-09 22:27:11] Further information can be found at the LHC@home message board.
[2024-02-09 22:27:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-02-09 22:27:11] Checking for apptainer binary...
[2024-02-09 22:27:11] apptainer is not installed, using version from CVMFS
[2024-02-09 22:27:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-02-09 22:27:11] WC5950
[2024-02-09 22:27:11] apptainer works
[2024-02-09 22:27:11] Starting ATLAS job with PandaID=6104435098
[2024-02-09 22:27:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/30 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-02-09 22:51:32]  *** The last 200 lines of the pilot log: ***
[2024-02-09 22:51:32] 2024-02-10 03:50:31,698 | WARNING  | aborting job monitor tasks since payload process 254572 is not running
[2024-02-09 22:51:32] 2024-02-10 03:50:34,200 | INFO     | monitor loop #211: job 0:6104435098 is in state 'stageout'
[2024-02-09 22:51:32] 2024-02-10 03:50:34,200 | WARNING  | aborting job monitor tasks since payload process 254572 is not running
[2024-02-09 22:51:32] 2024-02-10 03:50:35,616 | INFO     | [attempt=2/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2024-02-09 22:51:32] 2024-02-10 03:50:36,584 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2024-02-09 22:51:32] 2024-02-10 03:50:36,584 | INFO     | will try again after 26s..
[2024-02-09 22:51:32] 2024-02-10 03:50:36,706 | INFO     | monitor loop #212: job 0:6104435098 is in state 'stageout'
[2024-02-09 22:51:32] 2024-02-10 03:50:36,706 | WARNING  | aborting job monitor tasks since payload process 254572 is not running
[2024-02-09 22:51:32] 2024-02-10 03:50:39,216 | INFO     | monitor loop #213: job 0:6104435098 is in state 'stageout'
[2024-02-09 22:51:32] 2024-02-10 03:50:39,216 | WARNING  | aborting job monitor tasks since payload process 254572 is not running
[2024-02-09 22:51:32] 2024-02-10 03:50:41,722 | INFO     | monitor loop #214: job 0:6104435098 is in state 'stageout'
[2024-02-09 22:51:32] 2024-02-10 03:50:41,722 | WARNING  | aborting job monitor tasks since payload process 254572 is not running
[2024-02-09 22:51:32] 2024-02-10 03:50:44,224 | INFO     | monitor loop #215: job 0:6104435098 is in state 'stageout'
[2024-02-09 22:51:32] 2024-02-10 03:50:44,224 | WARNING  | aborting job monitor tasks since payload process 254572 is not running
[2024-02-09 22:51:32] 2024-02-10 03:50:46,736 | INFO     | monitor loop #216: job 0:6104435098 is in state 'stageout'
[2024-02-09 22:51:32] 2024-02-10 03:50:46,736 | WARNING  | aborting job monitor tasks since payload process 254572 is not running
[2024-02-09 22:51:32] 2024-02-10 03:50:49,239 | INFO     | monitor loop #217: job 0:6104435098 is in state 'stageout'
[2024-02-09 22:51:32] 2024-02-10 03:50:49,239 | WARNING  | aborting job monitor tasks since payload process 254572 is not running
[2024-02-09 22:51:32] 2024-02-10 03:50:51,740 | INFO     | monitor loop #218: job 0:6104435098 is in state 'stageout'
[2024-02-09 22:51:32] 2024-02-10 03:50:51,740 | WARNING  | aborting job monitor tasks since payload process 254572 is not running
[2024-02-09 22:51:32] 2024-02-10 03:50:54,243 | INFO     | monitor loop #219: job 0:6104435098 is in state 'stageout'
[2024-02-09 22:51:32] 2024-02-10 03:50:54,243 | WARNING  | aborting job monitor tasks since payload process 254572 is not running
[2024-02-09 22:51:32] 2024-02-10 03:50:56,752 | INFO     | monitor loop #220: job 0:6104435098 is in state 'stageout'
[2024-02-09 22:51:32] 2024-02-10 03:50:56,752 | WARNING  | aborting job monitor tasks since payload process 254572 is not running
[2024-02-09 22:51:32] 2024-02-10 03:50:59,257 | INFO     | monitor loop #221: job 0:6104435098 is in state 'stageout'
[2024-02-09 22:51:32] 2024-02-10 03:50:59,257 | WARNING  | aborting job monitor tasks since payload process 254572 is not running
[2024-02-09 22:51:32] 2024-02-10 03:51:01,759 | INFO     | monitor loop #222: job 0:6104435098 is in state 'stageout'
[2024-02-09 22:51:32] 2024-02-10 03:51:01,759 | WARNING  | aborting job monitor tasks since payload process 254572 is not running
[2024-02-09 22:51:32] 2024-02-10 03:51:02,684 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2024-02-09 22:51:32] 2024-02-10 03:51:02,942 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2024-02-09 22:51:32] 2024-02-10 03:51:02,942 | WARNING  | cache file=/var/lib/boinc-client/slots/30/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/30/ag
[2024-02-09 22:51:32] 2024-02-10 03:51:02,980 | INFO     | transferring file 102610fc-5441-43bf-9ede-d1ffbf657a87_39958.1.job.log.tgz from /var/lib/boinc-client/slots/30/PanDA_Pilot-6104435098/102610fc-5441-43bf-9ede-d1ffb
[2024-02-09 22:51:32] 2024-02-10 03:51:02,980 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/30/PanDA_Pilot-6104435098/102610fc-5441-43bf-9ede-d1ffbf657a87_39958.1.job.log.tgz /var/lib/boinc-cl
[2024-02-09 22:51:32] 2024-02-10 03:51:03,000 | INFO     | Adding to output.list: 102610fc-5441-43bf-9ede-d1ffbf657a87_39958.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/df/1c/102610fc-5441-
[2024-02-09 22:51:32] 2024-02-10 03:51:03,000 | INFO     | summary of transferred files:
[2024-02-09 22:51:32] 2024-02-10 03:51:03,000 | INFO     |  -- lfn=102610fc-5441-43bf-9ede-d1ffbf657a87_39958.1.job.log.tgz, status_code=0, status=transferred
[2024-02-09 22:51:32] 2024-02-10 03:51:03,001 | INFO     | stage-out finished correctly
[2024-02-09 22:51:32] 2024-02-10 03:51:04,143 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-02-09 22:51:32] 2024-02-10 03:51:04,260 | INFO     | monitor loop #223: job 0:6104435098 is in state 'finished'
[2024-02-09 22:51:32] 2024-02-10 03:51:04,260 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-09 22:51:32] 2024-02-10 03:51:04,792 | INFO     | job 6104435098 has state=finished
[2024-02-09 22:51:32] 2024-02-10 03:51:04,792 | INFO     | preparing for final server update for job 6104435098 in state='finished'
[2024-02-09 22:51:32] 2024-02-10 03:51:04,792 | INFO     | this job has now completed (state=finished)
[2024-02-09 22:51:32] 2024-02-10 03:51:04,792 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-02-09 22:51:32] 2024-02-10 03:51:04,792 | INFO     | job 6104435098 has finished - writing final server update
[2024-02-09 22:51:32] 2024-02-10 03:51:04,792 | INFO     | total number of processed events: 2 (read)
[2024-02-09 22:51:32] 2024-02-10 03:51:04,817 | INFO     | executing command: lscpu
[2024-02-09 22:51:32] 2024-02-10 03:51:04,845 | INFO     | found 16 cores (16 cores per socket, 1 sockets)
[2024-02-09 22:51:32] 2024-02-10 03:51:04,845 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-02-09 22:51:32] 2024-02-10 03:51:04,879 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-02-09 22:51:32] 2024-02-10 03:51:06,767 | INFO     | monitor loop #224: job 0:6104435098 is in state 'finished'
[2024-02-09 22:51:32] 2024-02-10 03:51:06,767 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-09 22:51:32] 2024-02-10 03:51:08,884 | INFO     | 1418s have passed since pilot start
[2024-02-09 22:51:32] 2024-02-10 03:51:09,275 | INFO     | monitor loop #225: job 0:6104435098 is in state 'finished'
[2024-02-09 22:51:32] 2024-02-10 03:51:09,275 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-09 22:51:32] 2024-02-10 03:51:11,780 | INFO     | monitor loop #226: job 0:6104435098 is in state 'finished'
[2024-02-09 22:51:32] 2024-02-10 03:51:11,780 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-09 22:51:32] 2024-02-10 03:51:11,827 | INFO     | CPU arch script returned: x86-64-v3
[2024-02-09 22:51:32] 2024-02-10 03:51:11,827 | INFO     | using path: /var/lib/boinc-client/slots/30/PanDA_Pilot-6104435098/memory_monitor_summary.json (trf name=prmon)
[2024-02-09 22:51:32] 2024-02-10 03:51:11,828 | INFO     | extracted standard info from prmon json
[2024-02-09 22:51:32] 2024-02-10 03:51:11,828 | INFO     | extracted standard memory fields from prmon json
[2024-02-09 22:51:32] 2024-02-10 03:51:11,828 | WARNING  | wrong length of table data, x=[1707536164.0, 1707536225.0, 1707536286.0, 1707536347.0, 1707536408.0, 1707536469.0, 1707536530.0], y=[924052.0, 1027565.0, 1086546.0
[2024-02-09 22:51:32] 2024-02-10 03:51:11,829 | INFO     | ..............................
[2024-02-09 22:51:32] 2024-02-10 03:51:11,829 | INFO     | . Timing measurements:
[2024-02-09 22:51:32] 2024-02-10 03:51:11,829 | INFO     | . get job = 64 s
[2024-02-09 22:51:32] 2024-02-10 03:51:11,829 | INFO     | . initial setup = 64 s
[2024-02-09 22:51:32] 2024-02-10 03:51:11,829 | INFO     | . payload setup = 7 s
[2024-02-09 22:51:32] 2024-02-10 03:51:11,829 | INFO     | . stage-in = 59 s
[2024-02-09 22:51:32] 2024-02-10 03:51:11,829 | INFO     | . payload execution = 815 s
[2024-02-09 22:51:32] 2024-02-10 03:51:11,829 | INFO     | . stage-out = 390 s
[2024-02-09 22:51:32] 2024-02-10 03:51:11,829 | INFO     | . log creation = 0 s
[2024-02-09 22:51:32] 2024-02-10 03:51:11,829 | INFO     | ..............................
[2024-02-09 22:51:32] 2024-02-10 03:51:12,102 | INFO     | 
[2024-02-09 22:51:32] 2024-02-10 03:51:12,103 | INFO     | job summary report
[2024-02-09 22:51:32] 2024-02-10 03:51:12,103 | INFO     | --------------------------------------------------
[2024-02-09 22:51:32] 2024-02-10 03:51:12,103 | INFO     | PanDA job id: 6104435098
[2024-02-09 22:51:32] 2024-02-10 03:51:12,103 | INFO     | task id: NULL
[2024-02-09 22:51:32] 2024-02-10 03:51:12,103 | INFO     | errors: (none)
[2024-02-09 22:51:32] 2024-02-10 03:51:12,103 | INFO     | status: LOG_TRANSFER = DONE 
[2024-02-09 22:51:32] 2024-02-10 03:51:12,103 | INFO     | pilot state: finished 
[2024-02-09 22:51:32] 2024-02-10 03:51:12,103 | INFO     | transexitcode: 0
[2024-02-09 22:51:32] 2024-02-10 03:51:12,103 | INFO     | exeerrorcode: 0
[2024-02-09 22:51:32] 2024-02-10 03:51:12,103 | INFO     | exeerrordiag: 
[2024-02-09 22:51:32] 2024-02-10 03:51:12,103 | INFO     | exitcode: 0
[2024-02-09 22:51:32] 2024-02-10 03:51:12,103 | INFO     | exitmsg: OK
[2024-02-09 22:51:32] 2024-02-10 03:51:12,103 | INFO     | cpuconsumptiontime: 395 s
[2024-02-09 22:51:32] 2024-02-10 03:51:12,103 | INFO     | nevents: 2
[2024-02-09 22:51:32] 2024-02-10 03:51:12,103 | INFO     | neventsw: 0
[2024-02-09 22:51:32] 2024-02-10 03:51:12,103 | INFO     | pid: 254572
[2024-02-09 22:51:32] 2024-02-10 03:51:12,103 | INFO     | pgrp: 254572
[2024-02-09 22:51:32] 2024-02-10 03:51:12,103 | INFO     | corecount: 1
[2024-02-09 22:51:32] 2024-02-10 03:51:12,103 | INFO     | event service: False
[2024-02-09 22:51:32] 2024-02-10 03:51:12,103 | INFO     | sizes: {0: 2406258, 1: 2407193, 12: 2407339, 22: 2407367, 33: 2407395, 44: 2407423, 54: 2407579, 65: 2407695, 826: 2427325, 1217: 2436391, 1218: 2436447, 1225: 243
[2024-02-09 22:51:32] 2024-02-10 03:51:12,103 | INFO     | --------------------------------------------------
[2024-02-09 22:51:32] 2024-02-10 03:51:12,103 | INFO     | 
[2024-02-09 22:51:32] 2024-02-10 03:51:12,103 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/30
[2024-02-09 22:51:32] 2024-02-10 03:51:12,118 | INFO     | queue jobs had 0 job(s) [purged]
[2024-02-09 22:51:32] 2024-02-10 03:51:12,118 | INFO     | queue payloads had 0 job(s) [purged]
[2024-02-09 22:51:32] 2024-02-10 03:51:12,118 | INFO     | queue data_in had 0 job(s) [purged]
[2024-02-09 22:51:32] 2024-02-10 03:51:12,118 | INFO     | queue data_out had 0 job(s) [purged]
[2024-02-09 22:51:32] 2024-02-10 03:51:12,118 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-02-09 22:51:32] 2024-02-10 03:51:12,118 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-02-09 22:51:32] 2024-02-10 03:51:12,118 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-02-09 22:51:32] 2024-02-10 03:51:12,118 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-02-09 22:51:32] 2024-02-10 03:51:12,118 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-02-09 22:51:32] 2024-02-10 03:51:12,118 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-02-09 22:51:32] 2024-02-10 03:51:12,118 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-02-09 22:51:32] 2024-02-10 03:51:12,118 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-02-09 22:51:32] 2024-02-10 03:51:12,118 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-02-09 22:51:32] 2024-02-10 03:51:12,118 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-02-09 22:51:32] 2024-02-10 03:51:12,118 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-02-09 22:51:32] 2024-02-10 03:51:12,118 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-02-09 22:51:32] 2024-02-10 03:51:12,119 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-02-09 22:51:32] 2024-02-10 03:51:12,119 | INFO     | queue completed_jobids has 1 job(s)
[2024-02-09 22:51:32] 2024-02-10 03:51:12,119 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-02-09 22:51:32] 2024-02-10 03:51:12,119 | INFO     | queue messages had 0 job(s) [purged]
[2024-02-09 22:51:32] 2024-02-10 03:51:12,119 | INFO     | job 6104435098 has completed (purged errors)
[2024-02-09 22:51:32] 2024-02-10 03:51:12,119 | INFO     | overall cleanup function is called
[2024-02-09 22:51:32] 2024-02-10 03:51:13,124 | INFO     | --- collectZombieJob: --- 10, [254572]
[2024-02-09 22:51:32] 2024-02-10 03:51:13,124 | INFO     | zombie collector waiting for pid 254572
[2024-02-09 22:51:32] 2024-02-10 03:51:13,124 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-02-09 22:51:32] 2024-02-10 03:51:14,128 | INFO     | collected zombie processes
[2024-02-09 22:51:32] 2024-02-10 03:51:14,128 | INFO     | will now attempt to kill all subprocesses of pid=254572
[2024-02-09 22:51:32] 2024-02-10 03:51:14,182 | INFO     | process IDs to be killed: [254572] (in reverse order)
[2024-02-09 22:51:32] 2024-02-10 03:51:14,222 | WARNING  | found no corresponding commands to process id(s)
[2024-02-09 22:51:32] 2024-02-10 03:51:14,222 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-02-09 22:51:32] 2024-02-10 03:51:14,225 | INFO     | did not find any defunct processes belonging to 254572
[2024-02-09 22:51:32] 2024-02-10 03:51:14,227 | INFO     | did not find any defunct processes belonging to 254572
[2024-02-09 22:51:32] 2024-02-10 03:51:14,227 | INFO     | ready for new job
[2024-02-09 22:51:32] 2024-02-10 03:51:14,227 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-02-09 22:51:32] 2024-02-10 03:51:14,228 | INFO     | **************************************
[2024-02-09 22:51:32] 2024-02-10 03:51:14,228 | INFO     | ***  PanDA Pilot version 3.7.0.36  ***
[2024-02-09 22:51:32] 2024-02-10 03:51:14,228 | INFO     | **************************************
[2024-02-09 22:51:32] 2024-02-10 03:51:14,228 | INFO     | 
[2024-02-09 22:51:32] 2024-02-10 03:51:14,253 | INFO     | architecture information:
[2024-02-09 22:51:32] 2024-02-10 03:51:14,253 | INFO     | executing command: cat /etc/os-release
[2024-02-09 22:51:32] 2024-02-10 03:51:14,276 | INFO     | cat /etc/os-release:
[2024-02-09 22:51:32] NAME="CentOS Linux"
[2024-02-09 22:51:32] VERSION="7 (Core)"
[2024-02-09 22:51:32] ID="centos"
[2024-02-09 22:51:32] ID_LIKE="rhel fedora"
[2024-02-09 22:51:32] VERSION_ID="7"
[2024-02-09 22:51:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-02-09 22:51:32] ANSI_COLOR="0;31"
[2024-02-09 22:51:32] CPE_NAME="cpe:/o:centos:centos:7"
[2024-02-09 22:51:32] HOME_URL="https://www.centos.org/"
[2024-02-09 22:51:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-02-09 22:51:32] 
[2024-02-09 22:51:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-02-09 22:51:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-02-09 22:51:32] REDHAT_SUPPORT_PRODUCT="centos"
[2024-02-09 22:51:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-02-09 22:51:32] 
[2024-02-09 22:51:32] 2024-02-10 03:51:14,276 | INFO     | **************************************
[2024-02-09 22:51:32] 2024-02-10 03:51:14,779 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/30
[2024-02-09 22:51:32] 2024-02-10 03:51:14,788 | INFO     | sufficient remaining disk space (368004038656 B)
[2024-02-09 22:51:32] 2024-02-10 03:51:14,789 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-02-09 22:51:32] 2024-02-10 03:51:14,789 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-02-09 22:51:32] 2024-02-10 03:51:14,789 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-02-09 22:51:32] 2024-02-10 03:51:14,789 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-02-09 22:51:32] 2024-02-10 03:51:14,789 | INFO     | found 0 job(s) in 20 queues
[2024-02-09 22:51:32] 2024-02-10 03:51:14,789 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-02-09 22:51:32] 2024-02-10 03:51:14,789 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-02-09 22:51:32] 2024-02-10 03:51:15,288 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-02-09 22:51:32] 2024-02-10 03:51:15,288 | INFO     | aborting loop
[2024-02-09 22:51:32] 2024-02-10 03:51:15,792 | INFO     | [job] retrieve thread has finished
[2024-02-09 22:51:32] 2024-02-10 03:51:15,812 | INFO     | [job] validate thread has finished
[2024-02-09 22:51:32] 2024-02-10 03:51:15,864 | INFO     | [payload] failed_post thread has finished
[2024-02-09 22:51:32] 2024-02-10 03:51:15,944 | INFO     | [data] copytool_in thread has finished
[2024-02-09 22:51:32] 2024-02-10 03:51:15,972 | INFO     | [payload] validate_post thread has finished
[2024-02-09 22:51:32] 2024-02-10 03:51:16,065 | INFO     | [data] control thread has finished
[2024-02-09 22:51:32] 2024-02-10 03:51:16,071 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-02-09 22:51:32] 2024-02-10 03:51:16,180 | INFO     | [job] control thread has finished
[2024-02-09 22:51:32] 2024-02-10 03:51:16,296 | INFO     | [job] job monitor thread has finished
[2024-02-09 22:51:32] 2024-02-10 03:51:16,412 | INFO     | [payload] execute_payloads thread has finished
[2024-02-09 22:51:32] 2024-02-10 03:51:16,440 | INFO     | [payload] control thread has finished
[2024-02-09 22:51:32] 2024-02-10 03:51:16,492 | INFO     | [job] create_data_payload thread has finished
[2024-02-09 22:51:32] 2024-02-10 03:51:16,612 | INFO     | [payload] validate_pre thread has finished
[2024-02-09 22:51:32] 2024-02-10 03:51:16,908 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-02-09 22:51:32] 2024-02-10 03:51:17,912 | INFO     | [job] queue monitor thread has finished
[2024-02-09 22:51:32] 2024-02-10 03:51:18,072 | INFO     | [data] copytool_out thread has finished
[2024-02-09 22:51:32] 2024-02-10 03:51:18,793 | INFO     | [data] queue_monitor thread has finished
[2024-02-09 22:51:32] 2024-02-10 03:51:24,868 | INFO     | job.realtimelogging is not enabled
[2024-02-09 22:51:32] 2024-02-10 03:51:25,872 | INFO     | [payload] run_realtimelog thread has finished
[2024-02-09 22:51:32] 2024-02-10 03:51:27,252 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140023920146240)>', '<ExcThread(monitor, started 140023466792704)>']
[2024-02-09 22:51:32] 2024-02-10 03:51:27,840 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-02-09 22:51:32] 2024-02-10 03:51:27,840 | INFO     | [monitor] control thread has ended
[2024-02-09 22:51:32] 2024-02-10 03:51:32,276 | INFO     | end of generic workflow (traces error code: 0)
[2024-02-09 22:51:32] 2024-02-10 03:51:32,276 | INFO     | traces error code: 0
[2024-02-09 22:51:32] 2024-02-10 03:51:32,276 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-02-09 22:51:32] 2024-02-10 03:51:32,326 [wrapper] ==== pilot stdout END ====
[2024-02-09 22:51:32] 2024-02-10 03:51:32,337 [wrapper] ==== wrapper stdout RESUME ====
[2024-02-09 22:51:32] 2024-02-10 03:51:32,346 [wrapper] pilotpid: 247307
[2024-02-09 22:51:32] 2024-02-10 03:51:32,349 [wrapper] Pilot exit status: 0
[2024-02-09 22:51:32] 2024-02-10 03:51:32,384 [wrapper] pandaids: 6104435098
[2024-02-09 22:51:32] 2024-02-10 03:51:32,438 [wrapper] cleanup: SIGTERM to supervisor_pilot  264181 247308
[2024-02-09 22:51:32] 2024-02-10 03:51:32,446 [wrapper] Test setup, not cleaning
[2024-02-09 22:51:32] 2024-02-10 03:51:32,454 [wrapper] ==== wrapper stdout END ====
[2024-02-09 22:51:32] 2024-02-10 03:51:32,464 [wrapper] ==== wrapper stderr END ====
[2024-02-09 22:51:32] 2024-02-10 03:51:32,476 [wrapper] apfmon messages muted
[2024-02-09 22:51:32]  *** Error codes and diagnostics ***
[2024-02-09 22:51:32]     "exeErrorCode": 0,
[2024-02-09 22:51:32]     "exeErrorDiag": "",
[2024-02-09 22:51:32]     "pilotErrorCode": 0,
[2024-02-09 22:51:32]     "pilotErrorDiag": "",
[2024-02-09 22:51:32]  *** Listing of results directory ***
[2024-02-09 22:51:32] total 44676
[2024-02-09 22:51:32] -rw-r--r-- 1 boinc boinc   441289 Feb  9 22:02 pilot3.tar.gz
[2024-02-09 22:51:32] -rwx------ 1 boinc boinc    31345 Feb  9 22:09 runpilot2-wrapper.sh
[2024-02-09 22:51:32] -rw-r--r-- 1 boinc boinc     4388 Feb  9 22:09 queuedata.json
[2024-02-09 22:51:32] -rw-r--r-- 1 boinc boinc      107 Feb  9 22:27 wrapper_26015_x86_64-pc-linux-gnu
[2024-02-09 22:51:32] -rwxr-xr-x 1 boinc boinc     7986 Feb  9 22:27 run_atlas
[2024-02-09 22:51:32] -rw-r--r-- 1 boinc boinc      112 Feb  9 22:27 job.xml
[2024-02-09 22:51:32] -rw-r--r-- 2 boinc boinc    17618 Feb  9 22:27 start_atlas.sh
[2024-02-09 22:51:32] drwxrwx--x 2 boinc boinc     4096 Feb  9 22:27 shared
[2024-02-09 22:51:32] -rw-r--r-- 2 boinc boinc   453819 Feb  9 22:27 input.tar.gz
[2024-02-09 22:51:32] -rw-r--r-- 1 boinc boinc     9513 Feb  9 22:27 init_data.xml
[2024-02-09 22:51:32] -rw-r--r-- 2 boinc boinc 38019645 Feb  9 22:27 EVNT.04972714._000023.pool.root.1
[2024-02-09 22:51:32] -rw-r--r-- 1 boinc boinc        0 Feb  9 22:27 boinc_lockfile
[2024-02-09 22:51:32] -rw-r--r-- 1 boinc boinc     2752 Feb  9 22:27 pandaJob.out
[2024-02-09 22:51:32] -rw------- 1 boinc boinc      424 Feb  9 22:27 setup.sh.local
[2024-02-09 22:51:32] -rw------- 1 boinc boinc  1341937 Feb  9 22:28 cric_ddmendpoints.json
[2024-02-09 22:51:32] -rw------- 1 boinc boinc   956353 Feb  9 22:28 agis_schedconf.cvmfs.json
[2024-02-09 22:51:32] drwx------ 4 boinc boinc     4096 Feb  9 22:29 pilot3
[2024-02-09 22:51:32] -rw------- 1 boinc boinc  1815670 Feb  9 22:44 output.1.102610fc-5441-43bf-9ede-d1ffbf657a87_39958.pool.root
[2024-02-09 22:51:32] -rw-r--r-- 1 boinc boinc      533 Feb  9 22:44 boinc_task_state.xml
[2024-02-09 22:51:32] -rw------- 1 boinc boinc     1000 Feb  9 22:44 memory_monitor_summary.json
[2024-02-09 22:51:32] -rw------- 1 boinc boinc   156334 Feb  9 22:48 102610fc-5441-43bf-9ede-d1ffbf657a87_39958.1.job.log.tgz
[2024-02-09 22:51:32] -rw------- 1 boinc boinc     6613 Feb  9 22:51 heartbeat.json
[2024-02-09 22:51:32] -rw-r--r-- 1 boinc boinc       25 Feb  9 22:51 wrapper_checkpoint.txt
[2024-02-09 22:51:32] -rw-r--r-- 1 boinc boinc     8192 Feb  9 22:51 boinc_mmap_file
[2024-02-09 22:51:32] -rw------- 1 boinc boinc     4105 Feb  9 22:51 pilotlog.txt
[2024-02-09 22:51:32] -rw------- 1 boinc boinc   177315 Feb  9 22:51 102610fc-5441-43bf-9ede-d1ffbf657a87_39958.1.job.log
[2024-02-09 22:51:32] -rw------- 1 boinc boinc      464 Feb  9 22:51 output.list
[2024-02-09 22:51:32] -rw-r--r-- 1 boinc boinc      748 Feb  9 22:51 runtime_log
[2024-02-09 22:51:32] -rw------- 1 boinc boinc  2170880 Feb  9 22:51 result.tar.gz
[2024-02-09 22:51:32] -rw-r--r-- 1 boinc boinc    11968 Feb  9 22:51 runtime_log.err
[2024-02-09 22:51:32] -rw------- 1 boinc boinc      625 Feb  9 22:51 9dLNDm6uss4n7Olcko1bjSoqABFKDmABFKDmyeZQDmIfKKDmysFHFm.diag
[2024-02-09 22:51:32] -rw-r--r-- 1 boinc boinc    23495 Feb  9 22:51 stderr.txt
[2024-02-09 22:51:32] HITS file was successfully produced:
[2024-02-09 22:51:32] -rw------- 1 boinc boinc 1815670 Feb  9 22:44 shared/HITS.pool.root.1
[2024-02-09 22:51:32]  *** Contents of shared directory: ***
[2024-02-09 22:51:32] total 41492
[2024-02-09 22:51:32] -rw-r--r-- 2 boinc boinc    17618 Feb  9 22:27 start_atlas.sh
[2024-02-09 22:51:32] -rw-r--r-- 2 boinc boinc   453819 Feb  9 22:27 input.tar.gz
[2024-02-09 22:51:32] -rw-r--r-- 2 boinc boinc 38019645 Feb  9 22:27 ATLAS.root_0
[2024-02-09 22:51:32] -rw------- 1 boinc boinc  1815670 Feb  9 22:44 HITS.pool.root.1
[2024-02-09 22:51:32] -rw------- 1 boinc boinc  2170880 Feb  9 22:51 result.tar.gz
22:51:34 (243243): run_atlas exited; CPU time 392.512971
22:51:34 (243243): called boinc_finish(0)

</stderr_txt>
]]>

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