| Name | KGuNDmVfZt4n7Olcko1bjSoqABFKDmABFKDmyeZQDmzjKKDmBonnBo_0 |
| Workunit | 2388435 |
| Created | 12 Feb 2024, 0:48:12 UTC |
| Sent | 12 Feb 2024, 0:52:27 UTC |
| Report deadline | 19 Feb 2024, 0:52:27 UTC |
| Received | 12 Feb 2024, 1:09:59 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 5097 |
| Run time | 12 min 2 sec |
| CPU time | 5 min 14 sec |
| Validate state | Valid |
| Credit | 43.38 |
| Device peak FLOPS | 43.13 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.57 GB |
| Peak swap size | 2.12 GB |
| Peak disk usage | 81.71 MB |
Stderr output
<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
19:57:42 (3977939): wrapper (7.7.26015): starting
19:57:42 (3977939): wrapper: running run_atlas (--nthreads 5)
[2024-02-11 19:57:42] Arguments: --nthreads 5
[2024-02-11 19:57:42] Threads: 5
[2024-02-11 19:57:42] Checking for CVMFS
[2024-02-11 19:57:59] Probing /cvmfs/atlas.cern.ch... OK
[2024-02-11 19:58:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-02-11 19:58:00] Running cvmfs_config stat atlas.cern.ch
[2024-02-11 19:58:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-02-11 19:58:01] 2.11.2.0 3978152 0 25712 129283 3 1 3403931 4096001 0 130560 0 0 100.000 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2024-02-11 19:58:01] CVMFS is ok
[2024-02-11 19:58:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-02-11 19:58:01] Small home clusters do not require a local http proxy but it is suggested if
[2024-02-11 19:58:01] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-02-11 19:58:01] Further information can be found at the LHC@home message board.
[2024-02-11 19:58:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-02-11 19:58:01] Checking for apptainer binary...
[2024-02-11 19:58:01] apptainer is not installed, using version from CVMFS
[2024-02-11 19:58:01] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-02-11 19:58:01] x32-kubuntu-7950X
[2024-02-11 19:58:01] apptainer works
[2024-02-11 19:58:01] Set ATHENA_PROC_NUMBER=5
[2024-02-11 19:58:01] Set ATHENA_CORE_NUMBER=5
[2024-02-11 19:58:01] Starting ATLAS job with PandaID=6106508546
[2024-02-11 19:58:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/16 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-02-11 20:09:42] *** The last 200 lines of the pilot log: ***
[2024-02-11 20:09:42] 2024-02-12 01:09:21,568 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /var/lib/boinc-client/slots/16/heartbeat.json
[2024-02-11 20:09:42] 2024-02-12 01:09:21,568 | DEBUG | pilot.control.job | queue_monitor | job.completed=False
[2024-02-11 20:09:42] 2024-02-12 01:09:21,574 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 60 s
[2024-02-11 20:09:42] 2024-02-12 01:09:21,607 | INFO | pilot.control.job | make_job_report |
[2024-02-11 20:09:42] 2024-02-12 01:09:21,607 | INFO | pilot.control.job | make_job_report | job summary report
[2024-02-11 20:09:42] 2024-02-12 01:09:21,609 | WARNING | pilot.util.monitoring | job_monitor_tasks | process 3989430 is no longer using CPU - aborting
[2024-02-11 20:09:42] 2024-02-12 01:09:21,609 | INFO | pilot.control.job | make_job_report | --------------------------------------------------
[2024-02-11 20:09:42] 2024-02-12 01:09:21,609 | DEBUG | pilot.control.job | job_monitor | job_monitor_tasks returned 0,
[2024-02-11 20:09:42] 2024-02-12 01:09:21,609 | INFO | pilot.control.job | make_job_report | PanDA job id: 6106508546
[2024-02-11 20:09:42] 2024-02-12 01:09:21,609 | INFO | pilot.control.job | job_monitor | aborting job monitoring since job object (job id=6106508546) has expired
[2024-02-11 20:09:42] 2024-02-12 01:09:21,609 | INFO | pilot.control.job | make_job_report | task id: NULL
[2024-02-11 20:09:42] 2024-02-12 01:09:21,609 | INFO | pilot.control.job | make_job_report | errors: (none)
[2024-02-11 20:09:42] 2024-02-12 01:09:21,609 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE
[2024-02-11 20:09:42] 2024-02-12 01:09:21,609 | INFO | pilot.control.job | make_job_report | pilot state: finished
[2024-02-11 20:09:42] 2024-02-12 01:09:21,609 | INFO | pilot.control.job | make_job_report | transexitcode: 0
[2024-02-11 20:09:42] 2024-02-12 01:09:21,609 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0
[2024-02-11 20:09:42] 2024-02-12 01:09:21,609 | INFO | pilot.control.job | make_job_report | exeerrordiag:
[2024-02-11 20:09:42] 2024-02-12 01:09:21,609 | INFO | pilot.control.job | make_job_report | exitcode: 0
[2024-02-11 20:09:42] 2024-02-12 01:09:21,609 | INFO | pilot.control.job | make_job_report | exitmsg: OK
[2024-02-11 20:09:42] 2024-02-12 01:09:21,609 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 318 s
[2024-02-11 20:09:42] 2024-02-12 01:09:21,609 | INFO | pilot.control.job | make_job_report | nevents: 2
[2024-02-11 20:09:42] 2024-02-12 01:09:21,609 | INFO | pilot.control.job | make_job_report | neventsw: 0
[2024-02-11 20:09:42] 2024-02-12 01:09:21,609 | INFO | pilot.control.job | make_job_report | pid: 3989430
[2024-02-11 20:09:42] 2024-02-12 01:09:21,609 | INFO | pilot.control.job | make_job_report | pgrp: 3989430
[2024-02-11 20:09:42] 2024-02-12 01:09:21,609 | INFO | pilot.control.job | make_job_report | corecount: 5
[2024-02-11 20:09:42] 2024-02-12 01:09:21,609 | INFO | pilot.control.job | make_job_report | event service: False
[2024-02-11 20:09:42] 2024-02-12 01:09:21,609 | INFO | pilot.control.job | make_job_report | sizes: {0: 2407219, 2: 2407425, 11: 2407453, 646: 2436122, 652: 2436288}
[2024-02-11 20:09:42] 2024-02-12 01:09:21,609 | INFO | pilot.control.job | make_job_report | --------------------------------------------------
[2024-02-11 20:09:42] 2024-02-12 01:09:21,610 | INFO | pilot.control.job | make_job_report |
[2024-02-11 20:09:42] 2024-02-12 01:09:21,610 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/16:
[2024-02-11 20:09:42]
[2024-02-11 20:09:42] 2024-02-12 01:09:21,610 | INFO | pilot.util.container | print_executable | executing command: ls -lF /var/lib/boinc-client/slots/16
[2024-02-11 20:09:42] 2024-02-12 01:09:21,615 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2024-02-11 20:09:42] 2024-02-12 01:09:21,621 | DEBUG | pilot.control.job | has_job_completed | total 43336
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 343371 Feb 11 20:09 6092570b-5eb4-45cb-897b-60259d7519bb_71758.1.job.log
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 164454 Feb 11 20:09 6092570b-5eb4-45cb-897b-60259d7519bb_71758.1.job.log.tgz
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 0 Feb 11 19:58 agis_ddmendpoints.agis.ALL.json
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 956361 Feb 11 19:58 agis_schedconf.cvmfs.json
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 0 Feb 11 19:57 boinc_lockfile
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 8192 Feb 11 20:09 boinc_mmap_file
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 532 Feb 11 20:09 boinc_task_state.xml
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 1341937 Feb 11 19:58 cric_ddmendpoints.json
[2024-02-11 20:09:42] -rw-r--r-- 2 boinc boinc 38288972 Feb 11 19:57 EVNT.04972714._000032.pool.root.1
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 6567 Feb 11 20:09 heartbeat.json
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 9518 Feb 11 19:57 init_data.xml
[2024-02-11 20:09:42] -rw-r--r-- 2 boinc boinc 501732 Feb 11 19:57 input.tar.gz
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 112 Feb 11 19:57 job.xml
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 140 Feb 11 19:58 KGuNDmVfZt4n7Olcko1bjSoqABFKDmABFKDmyeZQDmzjKKDmBonnBo.diag
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 997 Feb 11 20:09 memory_monitor_summary.json
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 1793881 Feb 11 20:09 output.1.6092570b-5eb4-45cb-897b-60259d7519bb_71758.pool.root
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 464 Feb 11 20:09 output.list
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 2661 Feb 11 19:58 pandaJob.out
[2024-02-11 20:09:42] drwxrwx--- 2 boinc boinc 4096 Feb 11 20:09 PanDA_Pilot-6106508546/
[2024-02-11 20:09:42] drwx------ 5 boinc boinc 4096 Feb 11 19:58 pilot3/
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 489800 Feb 11 19:48 pilot3.tar.gz
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 95 Feb 11 20:09 pilot_heartbeat.json
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 313947 Feb 11 20:09 pilotlog.txt
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 4388 Feb 11 19:48 queuedata.json
[2024-02-11 20:09:42] -rwxr-xr-x 1 boinc boinc 7986 Feb 11 19:57 run_atlas*
[2024-02-11 20:09:42] -rwx------ 1 boinc boinc 31343 Feb 11 19:48 runpilot2-wrapper.sh*
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 407 Feb 11 19:58 runtime_log
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 7879 Feb 11 19:58 runtime_log.err
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 424 Feb 11 19:58 setup.sh.local
[2024-02-11 20:09:42] drwxrwx--x 2 boinc boinc 4096 Feb 11 19:57 shared/
[2024-02-11 20:09:42] -rw-r--r-- 2 boinc boinc 17646 Feb 11 19:57 start_atlas.sh
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 2137 Feb 11 19:58 stderr.txt
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 107 Feb 11 19:57 wrapper_26015_x86_64-pc-linux-gnu
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 24 Feb 11 20:09 wrapper_checkpoint.txt
[2024-02-11 20:09:42] 2024-02-12 01:09:21,621 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged]
[2024-02-11 20:09:42] 2024-02-12 01:09:21,621 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged]
[2024-02-11 20:09:42] 2024-02-12 01:09:21,621 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged]
[2024-02-11 20:09:42] 2024-02-12 01:09:21,621 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged]
[2024-02-11 20:09:42] 2024-02-12 01:09:21,621 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged]
[2024-02-11 20:09:42] 2024-02-12 01:09:21,621 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged]
[2024-02-11 20:09:42] 2024-02-12 01:09:21,621 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged]
[2024-02-11 20:09:42] 2024-02-12 01:09:21,621 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged]
[2024-02-11 20:09:42] 2024-02-12 01:09:21,621 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged]
[2024-02-11 20:09:42] 2024-02-12 01:09:21,621 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged]
[2024-02-11 20:09:42] 2024-02-12 01:09:21,621 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged]
[2024-02-11 20:09:42] 2024-02-12 01:09:21,621 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged]
[2024-02-11 20:09:42] 2024-02-12 01:09:21,621 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged]
[2024-02-11 20:09:42] 2024-02-12 01:09:21,621 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged]
[2024-02-11 20:09:42] 2024-02-12 01:09:21,621 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged]
[2024-02-11 20:09:42] 2024-02-12 01:09:21,621 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged]
[2024-02-11 20:09:42] 2024-02-12 01:09:21,621 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged]
[2024-02-11 20:09:42] 2024-02-12 01:09:21,621 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s)
[2024-02-11 20:09:42] 2024-02-12 01:09:21,621 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged]
[2024-02-11 20:09:42] 2024-02-12 01:09:21,622 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged]
[2024-02-11 20:09:42] 2024-02-12 01:09:21,622 | INFO | pilot.control.job | has_job_completed | job 6106508546 has completed (purged errors)
[2024-02-11 20:09:42] 2024-02-12 01:09:21,622 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup
[2024-02-11 20:09:42] 2024-02-12 01:09:21,622 | INFO | pilot.util.processes | cleanup | overall cleanup function is called
[2024-02-11 20:09:42] 2024-02-12 01:09:21,623 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/16/PanDA_Pilot-6106508546
[2024-02-11 20:09:42] 2024-02-12 01:09:22,627 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [3989430]
[2024-02-11 20:09:42] 2024-02-12 01:09:22,627 | INFO | pilot.info.jobdata | collect_zombies | zombie collector waiting for pid 3989430
[2024-02-11 20:09:42] 2024-02-12 01:09:22,627 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-02-11 20:09:42] 2024-02-12 01:09:23,631 | INFO | pilot.util.processes | cleanup | collected zombie processes
[2024-02-11 20:09:42] 2024-02-12 01:09:23,631 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=3989430
[2024-02-11 20:09:42] 2024-02-12 01:09:23,635 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2024-02-11 20:09:42] 2024-02-12 01:09:23,668 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [3989430] (in reverse order)
[2024-02-11 20:09:42] 2024-02-12 01:09:23,672 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2024-02-11 20:09:42] 2024-02-12 01:09:23,694 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s)
[2024-02-11 20:09:42] 2024-02-12 01:09:23,694 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs
[2024-02-11 20:09:42] 2024-02-12 01:09:23,696 | INFO | pilot.util.processes | kill_defunct_children | did not find any defunct processes belonging to 3989430
[2024-02-11 20:09:42] 2024-02-12 01:09:23,698 | INFO | pilot.util.processes | kill_defunct_children | did not find any defunct processes belonging to 3989430
[2024-02-11 20:09:42] 2024-02-12 01:09:23,698 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged
[2024-02-11 20:09:42] 2024-02-12 01:09:23,698 | INFO | pilot.control.job | retrieve | ready for new job
[2024-02-11 20:09:42] 2024-02-12 01:09:23,698 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging
[2024-02-11 20:09:42] 2024-02-12 01:09:23,698 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************
[2024-02-11 20:09:42] 2024-02-12 01:09:23,698 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.7.1.50 ***
[2024-02-11 20:09:42] 2024-02-12 01:09:23,698 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************
[2024-02-11 20:09:42] 2024-02-12 01:09:23,698 | INFO | pilot.util.auxiliary | pilot_version_banner |
[2024-02-11 20:09:42] 2024-02-12 01:09:23,699 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information:
[2024-02-11 20:09:42] 2024-02-12 01:09:23,699 | INFO | pilot.util.container | print_executable | executing command: cat /etc/os-release
[2024-02-11 20:09:42] 2024-02-12 01:09:23,705 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2024-02-11 20:09:42] 2024-02-12 01:09:23,708 | INFO | pilot.util.filehandling | dump | cat /etc/os-release:
[2024-02-11 20:09:42] NAME="CentOS Linux"
[2024-02-11 20:09:42] VERSION="7 (Core)"
[2024-02-11 20:09:42] ID="centos"
[2024-02-11 20:09:42] ID_LIKE="rhel fedora"
[2024-02-11 20:09:42] VERSION_ID="7"
[2024-02-11 20:09:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-02-11 20:09:42] ANSI_COLOR="0;31"
[2024-02-11 20:09:42] CPE_NAME="cpe:/o:centos:centos:7"
[2024-02-11 20:09:42] HOME_URL="https://www.centos.org/"
[2024-02-11 20:09:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-02-11 20:09:42]
[2024-02-11 20:09:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-02-11 20:09:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-02-11 20:09:42] REDHAT_SUPPORT_PRODUCT="centos"
[2024-02-11 20:09:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-02-11 20:09:42]
[2024-02-11 20:09:42] 2024-02-12 01:09:23,708 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************
[2024-02-11 20:09:42] 2024-02-12 01:09:24,211 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/16
[2024-02-11 20:09:42] 2024-02-12 01:09:24,211 | INFO | pilot.util.container | print_executable | executing command: df -mP /var/lib/boinc-client/slots/16
[2024-02-11 20:09:42] 2024-02-12 01:09:24,216 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2024-02-11 20:09:42] 2024-02-12 01:09:24,221 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on
[2024-02-11 20:09:42] /dev/nvme1n1p2 937292 26962 862646 4% /var/lib/boinc-client/slots/16
[2024-02-11 20:09:42] 2024-02-12 01:09:24,221 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr=
[2024-02-11 20:09:42] 2024-02-12 01:09:24,221 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (904549892096 B)
[2024-02-11 20:09:42] 2024-02-12 01:09:24,221 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job
[2024-02-11 20:09:42] 2024-02-12 01:09:24,221 | WARNING | pilot.control.job | retrieve | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-02-11 20:09:42] 2024-02-12 01:09:24,221 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration
[2024-02-11 20:09:42] 2024-02-12 01:09:24,351 | INFO | pilot.control.job | control | all job control threads have been joined
[2024-02-11 20:09:42] 2024-02-12 01:09:24,351 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set
[2024-02-11 20:09:42] 2024-02-12 01:09:24,439 | INFO | pilot.util.queuehandling | abort_jobs_in_queues | found 0 job(s) in 20 queues
[2024-02-11 20:09:42] 2024-02-12 01:09:24,439 | WARNING | pilot.control.monitor | run_checks | pilot monitor received instruction that args.graceful_stop has been set
[2024-02-11 20:09:42] 2024-02-12 01:09:24,439 | WARNING | pilot.control.monitor | run_checks | will wait for a maximum of 300 s for threads to finish
[2024-02-11 20:09:42] 2024-02-12 01:09:25,116 | WARNING | pilot.util.common | should_abort | job:job_monitor:received graceful stop - abort after this iteration
[2024-02-11 20:09:42] 2024-02-12 01:09:25,116 | INFO | pilot.control.job | job_monitor | aborting loop
[2024-02-11 20:09:42] 2024-02-12 01:09:25,210 | INFO | pilot.control.data | control | all data control threads have been joined
[2024-02-11 20:09:42] 2024-02-12 01:09:25,210 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set
[2024-02-11 20:09:42] 2024-02-12 01:09:25,223 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished
[2024-02-11 20:09:42] 2024-02-12 01:09:25,355 | INFO | pilot.control.job | control | [job] control thread has finished
[2024-02-11 20:09:42] 2024-02-12 01:09:25,380 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished
[2024-02-11 20:09:42] 2024-02-12 01:09:25,463 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished
[2024-02-11 20:09:42] 2024-02-12 01:09:25,654 | INFO | pilot.control.payload | control | all payload control threads have been joined
[2024-02-11 20:09:42] 2024-02-12 01:09:25,654 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set
[2024-02-11 20:09:42] 2024-02-12 01:09:26,103 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished
[2024-02-11 20:09:42] 2024-02-12 01:09:26,119 | INFO | pilot.control.job | job_monitor | [job] job monitor thread has finished
[2024-02-11 20:09:42] 2024-02-12 01:09:26,211 | INFO | pilot.control.data | control | [data] control thread has finished
[2024-02-11 20:09:42] 2024-02-12 01:09:26,223 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished
[2024-02-11 20:09:42] 2024-02-12 01:09:26,324 | INFO | pilot.control.job | validate | [job] validate thread has finished
[2024-02-11 20:09:42] 2024-02-12 01:09:26,395 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished
[2024-02-11 20:09:42] 2024-02-12 01:09:26,483 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished
[2024-02-11 20:09:42] 2024-02-12 01:09:26,615 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration
[2024-02-11 20:09:42] 2024-02-12 01:09:26,642 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-02-11 20:09:42] 2024-02-12 01:09:26,659 | INFO | pilot.control.payload | control | [payload] control thread has finished
[2024-02-11 20:09:42] 2024-02-12 01:09:26,711 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished
[2024-02-11 20:09:42] 2024-02-12 01:09:27,619 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished
[2024-02-11 20:09:42] 2024-02-12 01:09:30,647 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished
[2024-02-11 20:09:42] 2024-02-12 01:09:35,235 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled
[2024-02-11 20:09:42] 2024-02-12 01:09:35,235 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point
[2024-02-11 20:09:42] 2024-02-12 01:09:35,244 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting ..
[2024-02-11 20:09:42] 2024-02-12 01:09:36,247 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished
[2024-02-11 20:09:42] 2024-02-12 01:09:37,559 | INFO | pilot.util.processes | threads_aborted | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139706
[2024-02-11 20:09:42] 2024-02-12 01:09:37,559 | DEBUG | pilot.workflow.generic | run | will proceed to set job_aborted
[2024-02-11 20:09:42] 2024-02-12 01:09:38,496 | WARNING | pilot.control.monitor | run_checks | job_aborted has been set - aborting pilot monitoring
[2024-02-11 20:09:42] 2024-02-12 01:09:38,496 | INFO | pilot.control.monitor | control | [monitor] control thread has ended
[2024-02-11 20:09:42] 2024-02-12 01:09:42,584 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1)
[2024-02-11 20:09:42] 2024-02-12 01:09:42,584 | INFO | pilot.workflow.generic | run | all workflow threads have been joined
[2024-02-11 20:09:42] 2024-02-12 01:09:42,584 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0)
[2024-02-11 20:09:42] 2024-02-12 01:09:42,617 | DEBUG | pilot.util.processgroups | get_all_child_pids | python3(3982233)---pstree(3999235)
[2024-02-11 20:09:42]
[2024-02-11 20:09:42] 2024-02-12 01:09:42,617 | INFO | pilot.util.processgroups | find_defunct_subprocesses | child pids=[3982233, 3999235]
[2024-02-11 20:09:42] 2024-02-12 01:09:42,637 | DEBUG | pilot.util.processgroups | is_defunct | 3982233: return code=0, stdout=SN
[2024-02-11 20:09:42] , stderr=
[2024-02-11 20:09:42] 2024-02-12 01:09:42,656 | DEBUG | pilot.util.processgroups | is_defunct | 3999235: return code=1, stdout=, stderr=
[2024-02-11 20:09:42] 2024-02-12 01:09:42,656 | INFO | root | list_zombies | no defunct processes were found
[2024-02-11 20:09:42] 2024-02-12 01:09:42,656 | INFO | root | get_proper_exit_code | traces error code: 0
[2024-02-11 20:09:42] 2024-02-12 01:09:42,656 | INFO | root | wrap_up | pilot has finished (exit code=0, shell exit code=0)
[2024-02-11 20:09:42] 2024-02-12 01:09:42,687 [wrapper] ==== pilot stdout END ====
[2024-02-11 20:09:42] 2024-02-12 01:09:42,688 [wrapper] ==== wrapper stdout RESUME ====
[2024-02-11 20:09:42] 2024-02-12 01:09:42,690 [wrapper] pilotpid: 3982233
[2024-02-11 20:09:42] 2024-02-12 01:09:42,691 [wrapper] Pilot exit status: 0
[2024-02-11 20:09:42] 2024-02-12 01:09:42,696 [wrapper] pandaids: 6106508546
[2024-02-11 20:09:42] 2024-02-12 01:09:42,716 [wrapper] cleanup: SIGTERM to supervisor_pilot 3982238 3982234
[2024-02-11 20:09:42] 2024-02-12 01:09:42,717 [wrapper] Test setup, not cleaning
[2024-02-11 20:09:42] 2024-02-12 01:09:42,718 [wrapper] ==== wrapper stdout END ====
[2024-02-11 20:09:42] 2024-02-12 01:09:42,720 [wrapper] ==== wrapper stderr END ====
[2024-02-11 20:09:42] 2024-02-12 01:09:42,722 [wrapper] apfmon messages muted
[2024-02-11 20:09:42] *** Error codes and diagnostics ***
[2024-02-11 20:09:42] "exeErrorCode": 0,
[2024-02-11 20:09:42] "exeErrorDiag": "",
[2024-02-11 20:09:42] "pilotErrorCode": 0,
[2024-02-11 20:09:42] "pilotErrorDiag": "",
[2024-02-11 20:09:42] *** Listing of results directory ***
[2024-02-11 20:09:42] total 45368
[2024-02-11 20:09:42] -rwx------ 1 boinc boinc 31343 Feb 11 19:48 runpilot2-wrapper.sh
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 4388 Feb 11 19:48 queuedata.json
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 489800 Feb 11 19:48 pilot3.tar.gz
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 107 Feb 11 19:57 wrapper_26015_x86_64-pc-linux-gnu
[2024-02-11 20:09:42] -rwxr-xr-x 1 boinc boinc 7986 Feb 11 19:57 run_atlas
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 112 Feb 11 19:57 job.xml
[2024-02-11 20:09:42] -rw-r--r-- 2 boinc boinc 17646 Feb 11 19:57 start_atlas.sh
[2024-02-11 20:09:42] drwxrwx--x 2 boinc boinc 4096 Feb 11 19:57 shared
[2024-02-11 20:09:42] -rw-r--r-- 2 boinc boinc 501732 Feb 11 19:57 input.tar.gz
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 9518 Feb 11 19:57 init_data.xml
[2024-02-11 20:09:42] -rw-r--r-- 2 boinc boinc 38288972 Feb 11 19:57 EVNT.04972714._000032.pool.root.1
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 0 Feb 11 19:57 boinc_lockfile
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 2661 Feb 11 19:58 pandaJob.out
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 424 Feb 11 19:58 setup.sh.local
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 956361 Feb 11 19:58 agis_schedconf.cvmfs.json
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 0 Feb 11 19:58 agis_ddmendpoints.agis.ALL.json
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 1341937 Feb 11 19:58 cric_ddmendpoints.json
[2024-02-11 20:09:42] drwx------ 5 boinc boinc 4096 Feb 11 19:58 pilot3
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 1793881 Feb 11 20:09 output.1.6092570b-5eb4-45cb-897b-60259d7519bb_71758.pool.root
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 997 Feb 11 20:09 memory_monitor_summary.json
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 164454 Feb 11 20:09 6092570b-5eb4-45cb-897b-60259d7519bb_71758.1.job.log.tgz
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 95 Feb 11 20:09 pilot_heartbeat.json
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 6567 Feb 11 20:09 heartbeat.json
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 8192 Feb 11 20:09 boinc_mmap_file
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 24 Feb 11 20:09 wrapper_checkpoint.txt
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 532 Feb 11 20:09 boinc_task_state.xml
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 9793 Feb 11 20:09 pilotlog.txt
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 361890 Feb 11 20:09 6092570b-5eb4-45cb-897b-60259d7519bb_71758.1.job.log
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 464 Feb 11 20:09 output.list
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 748 Feb 11 20:09 runtime_log
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 2334720 Feb 11 20:09 result.tar.gz
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 12158 Feb 11 20:09 runtime_log.err
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 630 Feb 11 20:09 KGuNDmVfZt4n7Olcko1bjSoqABFKDmABFKDmyeZQDmzjKKDmBonnBo.diag
[2024-02-11 20:09:42] -rw-r--r-- 1 boinc boinc 29491 Feb 11 20:09 stderr.txt
[2024-02-11 20:09:42] HITS file was successfully produced:
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 1793881 Feb 11 20:09 shared/HITS.pool.root.1
[2024-02-11 20:09:42] *** Contents of shared directory: ***
[2024-02-11 20:09:42] total 41936
[2024-02-11 20:09:42] -rw-r--r-- 2 boinc boinc 17646 Feb 11 19:57 start_atlas.sh
[2024-02-11 20:09:42] -rw-r--r-- 2 boinc boinc 501732 Feb 11 19:57 input.tar.gz
[2024-02-11 20:09:42] -rw-r--r-- 2 boinc boinc 38288972 Feb 11 19:57 ATLAS.root_0
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 1793881 Feb 11 20:09 HITS.pool.root.1
[2024-02-11 20:09:42] -rw------- 1 boinc boinc 2334720 Feb 11 20:09 result.tar.gz
20:09:44 (3977939): run_atlas exited; CPU time 314.425050
20:09:44 (3977939): called boinc_finish(0)
</stderr_txt>
]]>
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