Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
22:25:47 (4171289): wrapper (7.7.26015): starting
22:25:47 (4171289): wrapper: running run_atlas (--nthreads 5)
[2024-02-11 22:25:47] Arguments: --nthreads 5
[2024-02-11 22:25:47] Threads: 5
[2024-02-11 22:25:47] Checking for CVMFS
[2024-02-11 22:25:47] Probing /cvmfs/atlas.cern.ch... OK
[2024-02-11 22:25:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-02-11 22:25:47] Running cvmfs_config stat atlas.cern.ch
[2024-02-11 22:25:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-02-11 22:25:48] 2.11.2.0 4113771 24 45824 129287 3 75 2307930 4096000 1200 130560 0 159721 99.983 2214 593 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2024-02-11 22:25:48] CVMFS is ok
[2024-02-11 22:25:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-02-11 22:25:48] Small home clusters do not require a local http proxy but it is suggested if
[2024-02-11 22:25:48] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-02-11 22:25:48] Further information can be found at the LHC@home message board.
[2024-02-11 22:25:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-02-11 22:25:48] Checking for apptainer binary...
[2024-02-11 22:25:48] apptainer is not installed, using version from CVMFS
[2024-02-11 22:25:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-02-11 22:25:48] x32-kubuntu-7950X
[2024-02-11 22:25:48] apptainer works
[2024-02-11 22:25:48] Set ATHENA_PROC_NUMBER=5
[2024-02-11 22:25:48] Set ATHENA_CORE_NUMBER=5
[2024-02-11 22:25:48] Starting ATLAS job with PandaID=6106581891
[2024-02-11 22:25:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-02-11 22:42:13]  *** The last 200 lines of the pilot log: ***
[2024-02-11 22:42:13] 2024-02-12 03:41:11,869 | WARNING  | aborting job monitor tasks since payload process 4186088 is not running
[2024-02-11 22:42:13] 2024-02-12 03:41:12,007 | INFO     | [attempt=2/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2024-02-11 22:42:13] 2024-02-12 03:41:12,225 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2024-02-11 22:42:13] 2024-02-12 03:41:12,225 | INFO     | will try again after 36s..
[2024-02-11 22:42:13] 2024-02-12 03:41:14,371 | INFO     | monitor loop #151: job 0:6106581891 is in state 'stageout'
[2024-02-11 22:42:13] 2024-02-12 03:41:14,371 | WARNING  | aborting job monitor tasks since payload process 4186088 is not running
[2024-02-11 22:42:13] 2024-02-12 03:41:16,874 | INFO     | monitor loop #152: job 0:6106581891 is in state 'stageout'
[2024-02-11 22:42:13] 2024-02-12 03:41:16,874 | WARNING  | aborting job monitor tasks since payload process 4186088 is not running
[2024-02-11 22:42:13] 2024-02-12 03:41:19,375 | INFO     | monitor loop #153: job 0:6106581891 is in state 'stageout'
[2024-02-11 22:42:13] 2024-02-12 03:41:19,375 | WARNING  | aborting job monitor tasks since payload process 4186088 is not running
[2024-02-11 22:42:13] 2024-02-12 03:41:21,878 | INFO     | monitor loop #154: job 0:6106581891 is in state 'stageout'
[2024-02-11 22:42:13] 2024-02-12 03:41:21,878 | WARNING  | aborting job monitor tasks since payload process 4186088 is not running
[2024-02-11 22:42:13] 2024-02-12 03:41:24,379 | INFO     | monitor loop #155: job 0:6106581891 is in state 'stageout'
[2024-02-11 22:42:13] 2024-02-12 03:41:24,379 | WARNING  | aborting job monitor tasks since payload process 4186088 is not running
[2024-02-11 22:42:13] 2024-02-12 03:41:26,880 | INFO     | monitor loop #156: job 0:6106581891 is in state 'stageout'
[2024-02-11 22:42:13] 2024-02-12 03:41:26,880 | WARNING  | aborting job monitor tasks since payload process 4186088 is not running
[2024-02-11 22:42:13] 2024-02-12 03:41:28,487 | INFO     | 937s have passed since pilot start
[2024-02-11 22:42:13] 2024-02-12 03:41:29,383 | INFO     | monitor loop #157: job 0:6106581891 is in state 'stageout'
[2024-02-11 22:42:13] 2024-02-12 03:41:29,383 | WARNING  | aborting job monitor tasks since payload process 4186088 is not running
[2024-02-11 22:42:13] 2024-02-12 03:41:31,886 | INFO     | monitor loop #158: job 0:6106581891 is in state 'stageout'
[2024-02-11 22:42:13] 2024-02-12 03:41:31,886 | WARNING  | aborting job monitor tasks since payload process 4186088 is not running
[2024-02-11 22:42:13] 2024-02-12 03:41:34,388 | INFO     | monitor loop #159: job 0:6106581891 is in state 'stageout'
[2024-02-11 22:42:13] 2024-02-12 03:41:34,389 | WARNING  | aborting job monitor tasks since payload process 4186088 is not running
[2024-02-11 22:42:13] 2024-02-12 03:41:36,891 | INFO     | monitor loop #160: job 0:6106581891 is in state 'stageout'
[2024-02-11 22:42:13] 2024-02-12 03:41:36,891 | WARNING  | aborting job monitor tasks since payload process 4186088 is not running
[2024-02-11 22:42:13] 2024-02-12 03:41:39,394 | INFO     | monitor loop #161: job 0:6106581891 is in state 'stageout'
[2024-02-11 22:42:13] 2024-02-12 03:41:39,394 | WARNING  | aborting job monitor tasks since payload process 4186088 is not running
[2024-02-11 22:42:13] 2024-02-12 03:41:41,897 | INFO     | monitor loop #162: job 0:6106581891 is in state 'stageout'
[2024-02-11 22:42:13] 2024-02-12 03:41:41,897 | WARNING  | aborting job monitor tasks since payload process 4186088 is not running
[2024-02-11 22:42:13] 2024-02-12 03:41:44,399 | INFO     | monitor loop #163: job 0:6106581891 is in state 'stageout'
[2024-02-11 22:42:13] 2024-02-12 03:41:44,399 | WARNING  | aborting job monitor tasks since payload process 4186088 is not running
[2024-02-11 22:42:13] 2024-02-12 03:41:46,902 | INFO     | monitor loop #164: job 0:6106581891 is in state 'stageout'
[2024-02-11 22:42:13] 2024-02-12 03:41:46,902 | WARNING  | aborting job monitor tasks since payload process 4186088 is not running
[2024-02-11 22:42:13] 2024-02-12 03:41:48,323 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2024-02-11 22:42:13] 2024-02-12 03:41:48,551 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2024-02-11 22:42:13] 2024-02-12 03:41:48,551 | WARNING  | cache file=/var/lib/boinc-client/slots/12/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/12/ag
[2024-02-11 22:42:13] 2024-02-12 03:41:48,573 | INFO     | transferring file a55cd9d9-0d26-49b4-8d7c-8458bcddc9d6_84247.1.job.log.tgz from /var/lib/boinc-client/slots/12/PanDA_Pilot-6106581891/a55cd9d9-0d26-49b4-8d7c-8458b
[2024-02-11 22:42:13] 2024-02-12 03:41:48,573 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/12/PanDA_Pilot-6106581891/a55cd9d9-0d26-49b4-8d7c-8458bcddc9d6_84247.1.job.log.tgz /var/lib/boinc-cl
[2024-02-11 22:42:13] 2024-02-12 03:41:48,584 | INFO     | Adding to output.list: a55cd9d9-0d26-49b4-8d7c-8458bcddc9d6_84247.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/36/8b/a55cd9d9-0d26-
[2024-02-11 22:42:13] 2024-02-12 03:41:48,584 | INFO     | summary of transferred files:
[2024-02-11 22:42:13] 2024-02-12 03:41:48,584 | INFO     |  -- lfn=a55cd9d9-0d26-49b4-8d7c-8458bcddc9d6_84247.1.job.log.tgz, status_code=0, status=transferred
[2024-02-11 22:42:13] 2024-02-12 03:41:48,584 | INFO     | stage-out finished correctly
[2024-02-11 22:42:13] 2024-02-12 03:41:49,405 | INFO     | monitor loop #165: job 0:6106581891 is in state 'finished'
[2024-02-11 22:42:13] 2024-02-12 03:41:49,405 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-11 22:42:13] 2024-02-12 03:41:49,608 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-02-11 22:42:13] 2024-02-12 03:41:49,645 | INFO     | job 6106581891 has state=finished
[2024-02-11 22:42:13] 2024-02-12 03:41:49,645 | INFO     | preparing for final server update for job 6106581891 in state='finished'
[2024-02-11 22:42:13] 2024-02-12 03:41:49,645 | INFO     | executing command: curl --connect-timeout 20 --max-time 120 -H "Content-Type: application/json" -X POST --upload-file /var/lib/boinc-client/slots/12/PanDA_Pilot-61
[2024-02-11 22:42:13] 2024-02-12 03:41:50,618 | INFO     | this job has now completed (state=finished)
[2024-02-11 22:42:13] 2024-02-12 03:41:50,618 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-02-11 22:42:13] 2024-02-12 03:41:50,619 | INFO     | job 6106581891 has finished - writing final server update
[2024-02-11 22:42:13] 2024-02-12 03:41:50,619 | INFO     | total number of processed events: 2 (read)
[2024-02-11 22:42:13] 2024-02-12 03:41:50,620 | INFO     | executing command: lscpu
[2024-02-11 22:42:13] 2024-02-12 03:41:50,637 | INFO     | found 16 cores (16 cores per socket, 1 sockets)
[2024-02-11 22:42:13] 2024-02-12 03:41:50,637 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-02-11 22:42:13] 2024-02-12 03:41:50,657 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-02-11 22:42:13] 2024-02-12 03:41:51,907 | INFO     | monitor loop #166: job 0:6106581891 is in state 'finished'
[2024-02-11 22:42:13] 2024-02-12 03:41:51,907 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-11 22:42:13] 2024-02-12 03:41:52,418 | INFO     | CPU arch script returned: x86-64-v4
[2024-02-11 22:42:13] 2024-02-12 03:41:52,418 | INFO     | using path: /var/lib/boinc-client/slots/12/PanDA_Pilot-6106581891/memory_monitor_summary.json (trf name=prmon)
[2024-02-11 22:42:13] 2024-02-12 03:41:52,419 | INFO     | extracted standard info from prmon json
[2024-02-11 22:42:13] 2024-02-12 03:41:52,419 | INFO     | extracted standard memory fields from prmon json
[2024-02-11 22:42:13] 2024-02-12 03:41:52,419 | WARNING  | wrong length of table data, x=[1707708836.0], y=[993813.0] (must be same and length>=4)
[2024-02-11 22:42:13] 2024-02-12 03:41:52,419 | INFO     | ..............................
[2024-02-11 22:42:13] 2024-02-12 03:41:52,420 | INFO     | . Timing measurements:
[2024-02-11 22:42:13] 2024-02-12 03:41:52,420 | INFO     | . get job = 43 s
[2024-02-11 22:42:13] 2024-02-12 03:41:52,420 | INFO     | . initial setup = 64 s
[2024-02-11 22:42:13] 2024-02-12 03:41:52,420 | INFO     | . payload setup = 3 s
[2024-02-11 22:42:13] 2024-02-12 03:41:52,420 | INFO     | . stage-in = 59 s
[2024-02-11 22:42:13] 2024-02-12 03:41:52,420 | INFO     | . payload execution = 456 s
[2024-02-11 22:42:13] 2024-02-12 03:41:52,420 | INFO     | . stage-out = 320 s
[2024-02-11 22:42:13] 2024-02-12 03:41:52,420 | INFO     | . log creation = 0 s
[2024-02-11 22:42:13] 2024-02-12 03:41:52,420 | INFO     | ..............................
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | 
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | job summary report
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | --------------------------------------------------
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | PanDA job id: 6106581891
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | task id: NULL
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | errors: (none)
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | status: LOG_TRANSFER = DONE 
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | pilot state: finished 
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | transexitcode: 0
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | exeerrorcode: 0
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | exeerrordiag: 
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | exitcode: 0
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | exitmsg: OK
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | cpuconsumptiontime: 148 s
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | nevents: 2
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | neventsw: 0
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | pid: 4186088
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | pgrp: 4186088
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | corecount: 5
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | event service: False
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | sizes: {0: 2405672, 1: 2407216, 12: 2407362, 22: 2407390, 33: 2407418, 43: 2407446, 54: 2407602, 63: 2407690, 64: 2407718, 463: 2427195, 784: 2436261, 785: 2436597
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | --------------------------------------------------
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | 
[2024-02-11 22:42:13] 2024-02-12 03:41:52,510 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/12
[2024-02-11 22:42:13] 2024-02-12 03:41:52,520 | INFO     | queue jobs had 0 job(s) [purged]
[2024-02-11 22:42:13] 2024-02-12 03:41:52,520 | INFO     | queue payloads had 0 job(s) [purged]
[2024-02-11 22:42:13] 2024-02-12 03:41:52,520 | INFO     | queue data_in had 0 job(s) [purged]
[2024-02-11 22:42:13] 2024-02-12 03:41:52,520 | INFO     | queue data_out had 0 job(s) [purged]
[2024-02-11 22:42:13] 2024-02-12 03:41:52,520 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-02-11 22:42:13] 2024-02-12 03:41:52,520 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-02-11 22:42:13] 2024-02-12 03:41:52,520 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-02-11 22:42:13] 2024-02-12 03:41:52,520 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-02-11 22:42:13] 2024-02-12 03:41:52,520 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-02-11 22:42:13] 2024-02-12 03:41:52,520 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-02-11 22:42:13] 2024-02-12 03:41:52,520 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-02-11 22:42:13] 2024-02-12 03:41:52,520 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-02-11 22:42:13] 2024-02-12 03:41:52,520 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-02-11 22:42:13] 2024-02-12 03:41:52,521 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-02-11 22:42:13] 2024-02-12 03:41:52,521 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-02-11 22:42:13] 2024-02-12 03:41:52,521 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-02-11 22:42:13] 2024-02-12 03:41:52,521 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-02-11 22:42:13] 2024-02-12 03:41:52,521 | INFO     | queue completed_jobids has 1 job(s)
[2024-02-11 22:42:13] 2024-02-12 03:41:52,521 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-02-11 22:42:13] 2024-02-12 03:41:52,521 | INFO     | queue messages had 0 job(s) [purged]
[2024-02-11 22:42:13] 2024-02-12 03:41:52,521 | INFO     | job 6106581891 has completed (purged errors)
[2024-02-11 22:42:13] 2024-02-12 03:41:52,521 | INFO     | overall cleanup function is called
[2024-02-11 22:42:13] 2024-02-12 03:41:53,527 | INFO     | --- collectZombieJob: --- 10, [4186088]
[2024-02-11 22:42:13] 2024-02-12 03:41:53,527 | INFO     | zombie collector waiting for pid 4186088
[2024-02-11 22:42:13] 2024-02-12 03:41:53,528 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-02-11 22:42:13] 2024-02-12 03:41:54,531 | INFO     | collected zombie processes
[2024-02-11 22:42:13] 2024-02-12 03:41:54,531 | INFO     | will now attempt to kill all subprocesses of pid=4186088
[2024-02-11 22:42:13] 2024-02-12 03:41:54,577 | INFO     | process IDs to be killed: [4186088] (in reverse order)
[2024-02-11 22:42:13] 2024-02-12 03:41:54,607 | WARNING  | found no corresponding commands to process id(s)
[2024-02-11 22:42:13] 2024-02-12 03:41:54,607 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-02-11 22:42:13] 2024-02-12 03:41:54,609 | INFO     | did not find any defunct processes belonging to 4186088
[2024-02-11 22:42:13] 2024-02-12 03:41:54,611 | INFO     | did not find any defunct processes belonging to 4186088
[2024-02-11 22:42:13] 2024-02-12 03:41:54,611 | INFO     | ready for new job
[2024-02-11 22:42:13] 2024-02-12 03:41:54,611 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-02-11 22:42:13] 2024-02-12 03:41:54,612 | INFO     | **************************************
[2024-02-11 22:42:13] 2024-02-12 03:41:54,612 | INFO     | ***  PanDA Pilot version 3.7.0.36  ***
[2024-02-11 22:42:13] 2024-02-12 03:41:54,612 | INFO     | **************************************
[2024-02-11 22:42:13] 2024-02-12 03:41:54,612 | INFO     | 
[2024-02-11 22:42:13] 2024-02-12 03:41:54,613 | INFO     | architecture information:
[2024-02-11 22:42:13] 2024-02-12 03:41:54,613 | INFO     | executing command: cat /etc/os-release
[2024-02-11 22:42:13] 2024-02-12 03:41:54,620 | INFO     | cat /etc/os-release:
[2024-02-11 22:42:13] NAME="CentOS Linux"
[2024-02-11 22:42:13] VERSION="7 (Core)"
[2024-02-11 22:42:13] ID="centos"
[2024-02-11 22:42:13] ID_LIKE="rhel fedora"
[2024-02-11 22:42:13] VERSION_ID="7"
[2024-02-11 22:42:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-02-11 22:42:13] ANSI_COLOR="0;31"
[2024-02-11 22:42:13] CPE_NAME="cpe:/o:centos:centos:7"
[2024-02-11 22:42:13] HOME_URL="https://www.centos.org/"
[2024-02-11 22:42:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-02-11 22:42:13] 
[2024-02-11 22:42:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-02-11 22:42:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-02-11 22:42:13] REDHAT_SUPPORT_PRODUCT="centos"
[2024-02-11 22:42:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-02-11 22:42:13] 
[2024-02-11 22:42:13] 2024-02-12 03:41:54,620 | INFO     | **************************************
[2024-02-11 22:42:13] 2024-02-12 03:41:55,123 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/12
[2024-02-11 22:42:13] 2024-02-12 03:41:55,132 | INFO     | sufficient remaining disk space (905498853376 B)
[2024-02-11 22:42:13] 2024-02-12 03:41:55,132 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-02-11 22:42:13] 2024-02-12 03:41:55,132 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-02-11 22:42:13] 2024-02-12 03:41:55,415 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-02-11 22:42:13] 2024-02-12 03:41:55,415 | INFO     | aborting loop
[2024-02-11 22:42:13] 2024-02-12 03:41:55,547 | INFO     | found 0 job(s) in 20 queues
[2024-02-11 22:42:13] 2024-02-12 03:41:55,547 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-02-11 22:42:13] 2024-02-12 03:41:55,547 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-02-11 22:42:13] 2024-02-12 03:41:55,650 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-02-11 22:42:13] 2024-02-12 03:41:56,135 | INFO     | [job] retrieve thread has finished
[2024-02-11 22:42:13] 2024-02-12 03:41:56,239 | INFO     | [payload] validate_post thread has finished
[2024-02-11 22:42:13] 2024-02-12 03:41:56,347 | INFO     | [data] control thread has finished
[2024-02-11 22:42:13] 2024-02-12 03:41:56,419 | INFO     | [job] job monitor thread has finished
[2024-02-11 22:42:13] 2024-02-12 03:41:56,515 | INFO     | [payload] control thread has finished
[2024-02-11 22:42:13] 2024-02-12 03:41:56,631 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-02-11 22:42:13] 2024-02-12 03:41:56,747 | INFO     | [payload] execute_payloads thread has finished
[2024-02-11 22:42:13] 2024-02-12 03:41:57,008 | INFO     | [job] validate thread has finished
[2024-02-11 22:42:13] 2024-02-12 03:41:57,077 | INFO     | [job] create_data_payload thread has finished
[2024-02-11 22:42:13] 2024-02-12 03:41:57,132 | INFO     | [payload] validate_pre thread has finished
[2024-02-11 22:42:13] 2024-02-12 03:41:57,145 | INFO     | [job] control thread has finished
[2024-02-11 22:42:13] 2024-02-12 03:41:57,152 | INFO     | [data] copytool_in thread has finished
[2024-02-11 22:42:13] 2024-02-12 03:41:57,303 | INFO     | [payload] failed_post thread has finished
[2024-02-11 22:42:13] 2024-02-12 03:41:57,472 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-02-11 22:42:13] 2024-02-12 03:41:58,475 | INFO     | [job] queue monitor thread has finished
[2024-02-11 22:42:13] 2024-02-12 03:41:58,635 | INFO     | [data] copytool_out thread has finished
[2024-02-11 22:42:13] 2024-02-12 03:41:59,655 | INFO     | [data] queue_monitor thread has finished
[2024-02-11 22:42:13] 2024-02-12 03:42:05,797 | INFO     | job.realtimelogging is not enabled
[2024-02-11 22:42:13] 2024-02-12 03:42:06,802 | INFO     | [payload] run_realtimelog thread has finished
[2024-02-11 22:42:13] 2024-02-12 03:42:08,291 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140140383942464)>', '<ExcThread(monitor, started 140139716130560)>']
[2024-02-11 22:42:13] 2024-02-12 03:42:08,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-02-11 22:42:13] 2024-02-12 03:42:08,605 | INFO     | [monitor] control thread has ended
[2024-02-11 22:42:13] 2024-02-12 03:42:13,316 | INFO     | end of generic workflow (traces error code: 0)
[2024-02-11 22:42:13] 2024-02-12 03:42:13,317 | INFO     | traces error code: 0
[2024-02-11 22:42:13] 2024-02-12 03:42:13,317 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-02-11 22:42:13] 2024-02-12 03:42:13,349 [wrapper] ==== pilot stdout END ====
[2024-02-11 22:42:13] 2024-02-12 03:42:13,350 [wrapper] ==== wrapper stdout RESUME ====
[2024-02-11 22:42:13] 2024-02-12 03:42:13,351 [wrapper] pilotpid: 4175025
[2024-02-11 22:42:13] 2024-02-12 03:42:13,352 [wrapper] Pilot exit status: 0
[2024-02-11 22:42:13] 2024-02-12 03:42:13,357 [wrapper] pandaids: 6106581891
[2024-02-11 22:42:13] 2024-02-12 03:42:13,376 [wrapper] cleanup: SIGTERM to supervisor_pilot   46814 4175026
[2024-02-11 22:42:13] 2024-02-12 03:42:13,377 [wrapper] Test setup, not cleaning
[2024-02-11 22:42:13] 2024-02-12 03:42:13,378 [wrapper] ==== wrapper stdout END ====
[2024-02-11 22:42:13] 2024-02-12 03:42:13,380 [wrapper] ==== wrapper stderr END ====
[2024-02-11 22:42:13] 2024-02-12 03:42:13,382 [wrapper] apfmon messages muted
[2024-02-11 22:42:13]  *** Error codes and diagnostics ***
[2024-02-11 22:42:13]     "exeErrorCode": 0,
[2024-02-11 22:42:13]     "exeErrorDiag": "",
[2024-02-11 22:42:13]     "pilotErrorCode": 0,
[2024-02-11 22:42:13]     "pilotErrorDiag": "",
[2024-02-11 22:42:13]  *** Listing of results directory ***
[2024-02-11 22:42:13] total 43212
[2024-02-11 22:42:13] -rw-r--r-- 1 boinc boinc   441289 Feb 11 21:39 pilot3.tar.gz
[2024-02-11 22:42:13] -rw-r--r-- 1 boinc boinc     4388 Feb 11 22:03 queuedata.json
[2024-02-11 22:42:13] -rwx------ 1 boinc boinc    31345 Feb 11 22:05 runpilot2-wrapper.sh
[2024-02-11 22:42:13] -rw-r--r-- 1 boinc boinc      107 Feb 11 22:25 wrapper_26015_x86_64-pc-linux-gnu
[2024-02-11 22:42:13] -rwxr-xr-x 1 boinc boinc     7986 Feb 11 22:25 run_atlas
[2024-02-11 22:42:13] -rw-r--r-- 1 boinc boinc      112 Feb 11 22:25 job.xml
[2024-02-11 22:42:13] -rw-r--r-- 2 boinc boinc 37727106 Feb 11 22:25 EVNT.04972714._000037.pool.root.1
[2024-02-11 22:42:13] -rw-r--r-- 2 boinc boinc    17618 Feb 11 22:25 start_atlas.sh
[2024-02-11 22:42:13] drwxrwx--x 2 boinc boinc     4096 Feb 11 22:25 shared
[2024-02-11 22:42:13] -rw-r--r-- 2 boinc boinc   453826 Feb 11 22:25 input.tar.gz
[2024-02-11 22:42:13] -rw-r--r-- 1 boinc boinc     9518 Feb 11 22:25 init_data.xml
[2024-02-11 22:42:13] -rw-r--r-- 1 boinc boinc        0 Feb 11 22:25 boinc_lockfile
[2024-02-11 22:42:13] -rw-r--r-- 1 boinc boinc     2749 Feb 11 22:25 pandaJob.out
[2024-02-11 22:42:13] -rw------- 1 boinc boinc      424 Feb 11 22:25 setup.sh.local
[2024-02-11 22:42:13] -rw------- 1 boinc boinc  1341937 Feb 11 22:26 cric_ddmendpoints.json
[2024-02-11 22:42:13] -rw------- 1 boinc boinc   955990 Feb 11 22:26 agis_schedconf.cvmfs.json
[2024-02-11 22:42:13] drwx------ 4 boinc boinc     4096 Feb 11 22:27 pilot3
[2024-02-11 22:42:13] -rw------- 1 boinc boinc  1257601 Feb 11 22:36 output.1.a55cd9d9-0d26-49b4-8d7c-8458bcddc9d6_84247.pool.root
[2024-02-11 22:42:13] -rw------- 1 boinc boinc     1001 Feb 11 22:36 memory_monitor_summary.json
[2024-02-11 22:42:13] -rw-r--r-- 1 boinc boinc      532 Feb 11 22:36 boinc_task_state.xml
[2024-02-11 22:42:13] -rw------- 1 boinc boinc   150121 Feb 11 22:38 a55cd9d9-0d26-49b4-8d7c-8458bcddc9d6_84247.1.job.log.tgz
[2024-02-11 22:42:13] -rw------- 1 boinc boinc     6590 Feb 11 22:41 heartbeat.json
[2024-02-11 22:42:13] -rw-r--r-- 1 boinc boinc       24 Feb 11 22:42 wrapper_checkpoint.txt
[2024-02-11 22:42:13] -rw-r--r-- 1 boinc boinc     8192 Feb 11 22:42 boinc_mmap_file
[2024-02-11 22:42:13] -rw------- 1 boinc boinc     3982 Feb 11 22:42 pilotlog.txt
[2024-02-11 22:42:13] -rw------- 1 boinc boinc   140429 Feb 11 22:42 a55cd9d9-0d26-49b4-8d7c-8458bcddc9d6_84247.1.job.log
[2024-02-11 22:42:13] -rw------- 1 boinc boinc      464 Feb 11 22:42 output.list
[2024-02-11 22:42:13] -rw-r--r-- 1 boinc boinc      748 Feb 11 22:42 runtime_log
[2024-02-11 22:42:13] -rw------- 1 boinc boinc  1566720 Feb 11 22:42 result.tar.gz
[2024-02-11 22:42:13] -rw-r--r-- 1 boinc boinc    12150 Feb 11 22:42 runtime_log.err
[2024-02-11 22:42:13] -rw------- 1 boinc boinc      627 Feb 11 22:42 iK8LDmxobt4n7Olcko1bjSoqABFKDmABFKDmyeZQDmOkKKDmXX5u5n.diag
[2024-02-11 22:42:13] -rw-r--r-- 1 boinc boinc    23494 Feb 11 22:42 stderr.txt
[2024-02-11 22:42:13] HITS file was successfully produced:
[2024-02-11 22:42:13] -rw------- 1 boinc boinc 1257601 Feb 11 22:36 shared/HITS.pool.root.1
[2024-02-11 22:42:13]  *** Contents of shared directory: ***
[2024-02-11 22:42:13] total 40076
[2024-02-11 22:42:13] -rw-r--r-- 2 boinc boinc 37727106 Feb 11 22:25 ATLAS.root_0
[2024-02-11 22:42:13] -rw-r--r-- 2 boinc boinc    17618 Feb 11 22:25 start_atlas.sh
[2024-02-11 22:42:13] -rw-r--r-- 2 boinc boinc   453826 Feb 11 22:25 input.tar.gz
[2024-02-11 22:42:13] -rw------- 1 boinc boinc  1257601 Feb 11 22:36 HITS.pool.root.1
[2024-02-11 22:42:13] -rw------- 1 boinc boinc  1566720 Feb 11 22:42 result.tar.gz
22:42:14 (4171289): run_atlas exited; CPU time 147.011643
22:42:14 (4171289): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN