Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
03:48:26 (1553597): wrapper (7.7.26015): starting
03:48:26 (1553597): wrapper: running run_atlas (--nthreads 1)
[2024-02-14 03:48:26] Arguments: --nthreads 1
[2024-02-14 03:48:26] Threads: 1
[2024-02-14 03:48:26] Checking for CVMFS
[2024-02-14 03:48:27] Probing /cvmfs/atlas.cern.ch... OK
[2024-02-14 03:48:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-02-14 03:48:27] Running cvmfs_config stat atlas.cern.ch
[2024-02-14 03:48:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-02-14 03:48:27] 2.9.2.0 1521215 19 40804 129375 0 86 2644733 4194305 0 130560 0 91416 99.999 71 29 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2024-02-14 03:48:27] CVMFS is ok
[2024-02-14 03:48:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-02-14 03:48:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-02-14 03:48:27] Small home clusters do not require a local http proxy but it is suggested if
[2024-02-14 03:48:27] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-02-14 03:48:27] Further information can be found at the LHC@home message board.
[2024-02-14 03:48:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-02-14 03:48:27] Checking for apptainer binary...
[2024-02-14 03:48:27] apptainer is not installed, using version from CVMFS
[2024-02-14 03:48:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-02-14 03:48:27] WC5950
[2024-02-14 03:48:27] apptainer works
[2024-02-14 03:48:28] Starting ATLAS job with PandaID=6109241462
[2024-02-14 03:48:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-02-14 04:13:16]  *** The last 200 lines of the pilot log: ***
[2024-02-14 04:13:16] 2024-02-14 09:12:13,576 | INFO     | monitor loop #206: job 0:6109241462 is in state 'stageout'
[2024-02-14 04:13:16] 2024-02-14 09:12:13,576 | WARNING  | aborting job monitor tasks since payload process 1564613 is not running
[2024-02-14 04:13:16] 2024-02-14 09:12:16,079 | INFO     | monitor loop #207: job 0:6109241462 is in state 'stageout'
[2024-02-14 04:13:16] 2024-02-14 09:12:16,079 | WARNING  | aborting job monitor tasks since payload process 1564613 is not running
[2024-02-14 04:13:16] 2024-02-14 09:12:18,580 | INFO     | monitor loop #208: job 0:6109241462 is in state 'stageout'
[2024-02-14 04:13:16] 2024-02-14 09:12:18,580 | WARNING  | aborting job monitor tasks since payload process 1564613 is not running
[2024-02-14 04:13:16] 2024-02-14 09:12:21,083 | INFO     | monitor loop #209: job 0:6109241462 is in state 'stageout'
[2024-02-14 04:13:16] 2024-02-14 09:12:21,083 | WARNING  | aborting job monitor tasks since payload process 1564613 is not running
[2024-02-14 04:13:16] 2024-02-14 09:12:21,312 | INFO     | [attempt=2/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2024-02-14 04:13:16] 2024-02-14 09:12:21,806 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2024-02-14 04:13:16] 2024-02-14 09:12:21,806 | INFO     | will try again after 25s..
[2024-02-14 04:13:16] 2024-02-14 09:12:23,584 | INFO     | monitor loop #210: job 0:6109241462 is in state 'stageout'
[2024-02-14 04:13:16] 2024-02-14 09:12:23,584 | WARNING  | aborting job monitor tasks since payload process 1564613 is not running
[2024-02-14 04:13:16] 2024-02-14 09:12:26,087 | INFO     | monitor loop #211: job 0:6109241462 is in state 'stageout'
[2024-02-14 04:13:16] 2024-02-14 09:12:26,087 | WARNING  | aborting job monitor tasks since payload process 1564613 is not running
[2024-02-14 04:13:16] 2024-02-14 09:12:28,589 | INFO     | monitor loop #212: job 0:6109241462 is in state 'stageout'
[2024-02-14 04:13:16] 2024-02-14 09:12:28,589 | WARNING  | aborting job monitor tasks since payload process 1564613 is not running
[2024-02-14 04:13:16] 2024-02-14 09:12:31,092 | INFO     | monitor loop #213: job 0:6109241462 is in state 'stageout'
[2024-02-14 04:13:16] 2024-02-14 09:12:31,092 | WARNING  | aborting job monitor tasks since payload process 1564613 is not running
[2024-02-14 04:13:16] 2024-02-14 09:12:33,595 | INFO     | monitor loop #214: job 0:6109241462 is in state 'stageout'
[2024-02-14 04:13:16] 2024-02-14 09:12:33,595 | WARNING  | aborting job monitor tasks since payload process 1564613 is not running
[2024-02-14 04:13:16] 2024-02-14 09:12:36,096 | INFO     | monitor loop #215: job 0:6109241462 is in state 'stageout'
[2024-02-14 04:13:16] 2024-02-14 09:12:36,096 | WARNING  | aborting job monitor tasks since payload process 1564613 is not running
[2024-02-14 04:13:16] 2024-02-14 09:12:38,599 | INFO     | monitor loop #216: job 0:6109241462 is in state 'stageout'
[2024-02-14 04:13:16] 2024-02-14 09:12:38,599 | WARNING  | aborting job monitor tasks since payload process 1564613 is not running
[2024-02-14 04:13:16] 2024-02-14 09:12:41,104 | INFO     | monitor loop #217: job 0:6109241462 is in state 'stageout'
[2024-02-14 04:13:16] 2024-02-14 09:12:41,104 | WARNING  | aborting job monitor tasks since payload process 1564613 is not running
[2024-02-14 04:13:16] 2024-02-14 09:12:43,607 | INFO     | monitor loop #218: job 0:6109241462 is in state 'stageout'
[2024-02-14 04:13:16] 2024-02-14 09:12:43,607 | WARNING  | aborting job monitor tasks since payload process 1564613 is not running
[2024-02-14 04:13:16] 2024-02-14 09:12:46,108 | INFO     | monitor loop #219: job 0:6109241462 is in state 'stageout'
[2024-02-14 04:13:16] 2024-02-14 09:12:46,108 | WARNING  | aborting job monitor tasks since payload process 1564613 is not running
[2024-02-14 04:13:16] 2024-02-14 09:12:46,904 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2024-02-14 04:13:16] 2024-02-14 09:12:47,409 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2024-02-14 04:13:16] 2024-02-14 09:12:47,409 | WARNING  | cache file=/var/lib/boinc-client/slots/0/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/0/agis
[2024-02-14 04:13:16] 2024-02-14 09:12:47,441 | INFO     | transferring file d0c87284-f6ab-4497-aae4-53b37931a27b_16809.1.job.log.tgz from /var/lib/boinc-client/slots/0/PanDA_Pilot-6109241462/d0c87284-f6ab-4497-aae4-53b379
[2024-02-14 04:13:16] 2024-02-14 09:12:47,441 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6109241462/d0c87284-f6ab-4497-aae4-53b37931a27b_16809.1.job.log.tgz /var/lib/boinc-cli
[2024-02-14 04:13:16] 2024-02-14 09:12:47,456 | INFO     | Adding to output.list: d0c87284-f6ab-4497-aae4-53b37931a27b_16809.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/c0/b9/d0c87284-f6ab-
[2024-02-14 04:13:16] 2024-02-14 09:12:47,456 | INFO     | summary of transferred files:
[2024-02-14 04:13:16] 2024-02-14 09:12:47,456 | INFO     |  -- lfn=d0c87284-f6ab-4497-aae4-53b37931a27b_16809.1.job.log.tgz, status_code=0, status=transferred
[2024-02-14 04:13:16] 2024-02-14 09:12:47,456 | INFO     | stage-out finished correctly
[2024-02-14 04:13:16] 2024-02-14 09:12:48,611 | INFO     | monitor loop #220: job 0:6109241462 is in state 'finished'
[2024-02-14 04:13:16] 2024-02-14 09:12:48,611 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-14 04:13:16] 2024-02-14 09:12:49,028 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-02-14 04:13:16] 2024-02-14 09:12:49,083 | INFO     | job 6109241462 has state=finished
[2024-02-14 04:13:16] 2024-02-14 09:12:49,084 | INFO     | preparing for final server update for job 6109241462 in state='finished'
[2024-02-14 04:13:16] 2024-02-14 09:12:49,084 | INFO     | this job has now completed (state=finished)
[2024-02-14 04:13:16] 2024-02-14 09:12:49,084 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-02-14 04:13:16] 2024-02-14 09:12:49,084 | INFO     | job 6109241462 has finished - writing final server update
[2024-02-14 04:13:16] 2024-02-14 09:12:49,084 | INFO     | total number of processed events: 2 (read)
[2024-02-14 04:13:16] 2024-02-14 09:12:49,109 | INFO     | executing command: lscpu
[2024-02-14 04:13:16] 2024-02-14 09:12:49,131 | INFO     | found 16 cores (16 cores per socket, 1 sockets)
[2024-02-14 04:13:16] 2024-02-14 09:12:49,131 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-02-14 04:13:16] 2024-02-14 09:12:49,153 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-02-14 04:13:16] 2024-02-14 09:12:51,112 | INFO     | monitor loop #221: job 0:6109241462 is in state 'finished'
[2024-02-14 04:13:16] 2024-02-14 09:12:51,112 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-14 04:13:16] 2024-02-14 09:12:53,615 | INFO     | monitor loop #222: job 0:6109241462 is in state 'finished'
[2024-02-14 04:13:16] 2024-02-14 09:12:53,616 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-14 04:13:16] 2024-02-14 09:12:56,070 | INFO     | CPU arch script returned: x86-64-v3
[2024-02-14 04:13:16] 2024-02-14 09:12:56,071 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6109241462/memory_monitor_summary.json (trf name=prmon)
[2024-02-14 04:13:16] 2024-02-14 09:12:56,071 | INFO     | extracted standard info from prmon json
[2024-02-14 04:13:16] 2024-02-14 09:12:56,071 | INFO     | extracted standard memory fields from prmon json
[2024-02-14 04:13:16] 2024-02-14 09:12:56,072 | INFO     | fitting pss+swap vs Time
[2024-02-14 04:13:16] 2024-02-14 09:12:56,072 | INFO     | current memory leak: 2176.73 B/s (using 8 data points, chi2=0.06)
[2024-02-14 04:13:16] 2024-02-14 09:12:56,072 | INFO     | ..............................
[2024-02-14 04:13:16] 2024-02-14 09:12:56,073 | INFO     | . Timing measurements:
[2024-02-14 04:13:16] 2024-02-14 09:12:56,073 | INFO     | . get job = 63 s
[2024-02-14 04:13:16] 2024-02-14 09:12:56,073 | INFO     | . initial setup = 47 s
[2024-02-14 04:13:16] 2024-02-14 09:12:56,073 | INFO     | . payload setup = 6 s
[2024-02-14 04:13:16] 2024-02-14 09:12:56,073 | INFO     | . stage-in = 73 s
[2024-02-14 04:13:16] 2024-02-14 09:12:56,073 | INFO     | . payload execution = 867 s
[2024-02-14 04:13:16] 2024-02-14 09:12:56,073 | INFO     | . stage-out = 366 s
[2024-02-14 04:13:16] 2024-02-14 09:12:56,073 | INFO     | . log creation = 0 s
[2024-02-14 04:13:16] 2024-02-14 09:12:56,073 | INFO     | ..............................
[2024-02-14 04:13:16] 2024-02-14 09:12:56,139 | INFO     | 
[2024-02-14 04:13:16] 2024-02-14 09:12:56,139 | INFO     | job summary report
[2024-02-14 04:13:16] 2024-02-14 09:12:56,139 | INFO     | --------------------------------------------------
[2024-02-14 04:13:16] 2024-02-14 09:12:56,139 | INFO     | PanDA job id: 6109241462
[2024-02-14 04:13:16] 2024-02-14 09:12:56,139 | INFO     | task id: NULL
[2024-02-14 04:13:16] 2024-02-14 09:12:56,139 | INFO     | errors: (none)
[2024-02-14 04:13:16] 2024-02-14 09:12:56,139 | INFO     | status: LOG_TRANSFER = DONE 
[2024-02-14 04:13:16] 2024-02-14 09:12:56,139 | INFO     | pilot state: finished 
[2024-02-14 04:13:16] 2024-02-14 09:12:56,139 | INFO     | transexitcode: 0
[2024-02-14 04:13:16] 2024-02-14 09:12:56,139 | INFO     | exeerrorcode: 0
[2024-02-14 04:13:16] 2024-02-14 09:12:56,139 | INFO     | exeerrordiag: 
[2024-02-14 04:13:16] 2024-02-14 09:12:56,139 | INFO     | exitcode: 0
[2024-02-14 04:13:16] 2024-02-14 09:12:56,139 | INFO     | exitmsg: OK
[2024-02-14 04:13:16] 2024-02-14 09:12:56,139 | INFO     | cpuconsumptiontime: 447 s
[2024-02-14 04:13:16] 2024-02-14 09:12:56,139 | INFO     | nevents: 2
[2024-02-14 04:13:16] 2024-02-14 09:12:56,139 | INFO     | neventsw: 0
[2024-02-14 04:13:16] 2024-02-14 09:12:56,140 | INFO     | pid: 1564613
[2024-02-14 04:13:16] 2024-02-14 09:12:56,140 | INFO     | pgrp: 1564613
[2024-02-14 04:13:16] 2024-02-14 09:12:56,140 | INFO     | corecount: 1
[2024-02-14 04:13:16] 2024-02-14 09:12:56,140 | INFO     | event service: False
[2024-02-14 04:13:16] 2024-02-14 09:12:56,140 | INFO     | sizes: {0: 2405649, 1: 2407192, 12: 2407338, 23: 2407366, 33: 2407394, 44: 2407422, 54: 2407578, 65: 2407606, 76: 2407634, 78: 2407750, 86: 2407806, 877: 2427740, 
[2024-02-14 04:13:16] 2024-02-14 09:12:56,140 | INFO     | --------------------------------------------------
[2024-02-14 04:13:16] 2024-02-14 09:12:56,140 | INFO     | 
[2024-02-14 04:13:16] 2024-02-14 09:12:56,144 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2024-02-14 04:13:16] 2024-02-14 09:12:56,165 | INFO     | queue jobs had 0 job(s) [purged]
[2024-02-14 04:13:16] 2024-02-14 09:12:56,165 | INFO     | queue payloads had 0 job(s) [purged]
[2024-02-14 04:13:16] 2024-02-14 09:12:56,165 | INFO     | queue data_in had 0 job(s) [purged]
[2024-02-14 04:13:16] 2024-02-14 09:12:56,165 | INFO     | queue data_out had 0 job(s) [purged]
[2024-02-14 04:13:16] 2024-02-14 09:12:56,165 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-02-14 04:13:16] 2024-02-14 09:12:56,165 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-02-14 04:13:16] 2024-02-14 09:12:56,165 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-02-14 04:13:16] 2024-02-14 09:12:56,165 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-02-14 04:13:16] 2024-02-14 09:12:56,165 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-02-14 04:13:16] 2024-02-14 09:12:56,165 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-02-14 04:13:16] 2024-02-14 09:12:56,165 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-02-14 04:13:16] 2024-02-14 09:12:56,165 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-02-14 04:13:16] 2024-02-14 09:12:56,165 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-02-14 04:13:16] 2024-02-14 09:12:56,165 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-02-14 04:13:16] 2024-02-14 09:12:56,165 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-02-14 04:13:16] 2024-02-14 09:12:56,165 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-02-14 04:13:16] 2024-02-14 09:12:56,165 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-02-14 04:13:16] 2024-02-14 09:12:56,165 | INFO     | queue completed_jobids has 1 job(s)
[2024-02-14 04:13:16] 2024-02-14 09:12:56,165 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-02-14 04:13:16] 2024-02-14 09:12:56,165 | INFO     | queue messages had 0 job(s) [purged]
[2024-02-14 04:13:16] 2024-02-14 09:12:56,166 | INFO     | job 6109241462 has completed (purged errors)
[2024-02-14 04:13:16] 2024-02-14 09:12:56,166 | INFO     | overall cleanup function is called
[2024-02-14 04:13:16] 2024-02-14 09:12:57,172 | INFO     | --- collectZombieJob: --- 10, [1564613]
[2024-02-14 04:13:16] 2024-02-14 09:12:57,172 | INFO     | zombie collector waiting for pid 1564613
[2024-02-14 04:13:16] 2024-02-14 09:12:57,172 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-02-14 04:13:16] 2024-02-14 09:12:58,180 | INFO     | collected zombie processes
[2024-02-14 04:13:16] 2024-02-14 09:12:58,180 | INFO     | will now attempt to kill all subprocesses of pid=1564613
[2024-02-14 04:13:16] 2024-02-14 09:12:58,239 | INFO     | process IDs to be killed: [1564613] (in reverse order)
[2024-02-14 04:13:16] 2024-02-14 09:12:58,278 | WARNING  | found no corresponding commands to process id(s)
[2024-02-14 04:13:16] 2024-02-14 09:12:58,278 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-02-14 04:13:16] 2024-02-14 09:12:58,281 | INFO     | did not find any defunct processes belonging to 1564613
[2024-02-14 04:13:16] 2024-02-14 09:12:58,290 | INFO     | did not find any defunct processes belonging to 1564613
[2024-02-14 04:13:16] 2024-02-14 09:12:58,290 | INFO     | ready for new job
[2024-02-14 04:13:16] 2024-02-14 09:12:58,290 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-02-14 04:13:16] 2024-02-14 09:12:58,291 | INFO     | **************************************
[2024-02-14 04:13:16] 2024-02-14 09:12:58,291 | INFO     | ***  PanDA Pilot version 3.7.0.36  ***
[2024-02-14 04:13:16] 2024-02-14 09:12:58,291 | INFO     | **************************************
[2024-02-14 04:13:16] 2024-02-14 09:12:58,291 | INFO     | 
[2024-02-14 04:13:16] 2024-02-14 09:12:58,313 | INFO     | architecture information:
[2024-02-14 04:13:16] 2024-02-14 09:12:58,316 | INFO     | executing command: cat /etc/os-release
[2024-02-14 04:13:16] 2024-02-14 09:12:58,333 | INFO     | cat /etc/os-release:
[2024-02-14 04:13:16] NAME="CentOS Linux"
[2024-02-14 04:13:16] VERSION="7 (Core)"
[2024-02-14 04:13:16] ID="centos"
[2024-02-14 04:13:16] ID_LIKE="rhel fedora"
[2024-02-14 04:13:16] VERSION_ID="7"
[2024-02-14 04:13:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-02-14 04:13:16] ANSI_COLOR="0;31"
[2024-02-14 04:13:16] CPE_NAME="cpe:/o:centos:centos:7"
[2024-02-14 04:13:16] HOME_URL="https://www.centos.org/"
[2024-02-14 04:13:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-02-14 04:13:16] 
[2024-02-14 04:13:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-02-14 04:13:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-02-14 04:13:16] REDHAT_SUPPORT_PRODUCT="centos"
[2024-02-14 04:13:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-02-14 04:13:16] 
[2024-02-14 04:13:16] 2024-02-14 09:12:58,333 | INFO     | **************************************
[2024-02-14 04:13:16] 2024-02-14 09:12:58,836 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2024-02-14 04:13:16] 2024-02-14 09:12:58,850 | INFO     | sufficient remaining disk space (368773693440 B)
[2024-02-14 04:13:16] 2024-02-14 09:12:58,850 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-02-14 04:13:16] 2024-02-14 09:12:58,850 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-02-14 04:13:16] 2024-02-14 09:12:58,850 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-02-14 04:13:16] 2024-02-14 09:12:59,603 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-02-14 04:13:16] 2024-02-14 09:12:59,628 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-02-14 04:13:16] 2024-02-14 09:12:59,628 | INFO     | aborting loop
[2024-02-14 04:13:16] 2024-02-14 09:12:59,808 | INFO     | found 0 job(s) in 20 queues
[2024-02-14 04:13:16] 2024-02-14 09:12:59,808 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-02-14 04:13:16] 2024-02-14 09:12:59,808 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-02-14 04:13:16] 2024-02-14 09:12:59,852 | INFO     | [job] retrieve thread has finished
[2024-02-14 04:13:16] 2024-02-14 09:12:59,856 | INFO     | [payload] validate_pre thread has finished
[2024-02-14 04:13:16] 2024-02-14 09:13:00,040 | INFO     | [data] copytool_in thread has finished
[2024-02-14 04:13:16] 2024-02-14 09:13:00,072 | INFO     | [job] control thread has finished
[2024-02-14 04:13:16] 2024-02-14 09:13:00,488 | INFO     | [payload] control thread has finished
[2024-02-14 04:13:16] 2024-02-14 09:13:00,632 | INFO     | [job] job monitor thread has finished
[2024-02-14 04:13:16] 2024-02-14 09:13:00,664 | INFO     | [payload] execute_payloads thread has finished
[2024-02-14 04:13:16] 2024-02-14 09:13:00,744 | INFO     | [payload] validate_post thread has finished
[2024-02-14 04:13:16] 2024-02-14 09:13:00,852 | INFO     | [data] copytool_out thread has finished
[2024-02-14 04:13:16] 2024-02-14 09:13:00,876 | INFO     | [data] control thread has finished
[2024-02-14 04:13:16] 2024-02-14 09:13:00,924 | INFO     | [payload] failed_post thread has finished
[2024-02-14 04:13:16] 2024-02-14 09:13:00,956 | INFO     | [job] validate thread has finished
[2024-02-14 04:13:16] 2024-02-14 09:13:00,960 | INFO     | [job] create_data_payload thread has finished
[2024-02-14 04:13:16] 2024-02-14 09:13:01,144 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-02-14 04:13:16] 2024-02-14 09:13:02,148 | INFO     | [job] queue monitor thread has finished
[2024-02-14 04:13:16] 2024-02-14 09:13:03,608 | INFO     | [data] queue_monitor thread has finished
[2024-02-14 04:13:16] 2024-02-14 09:13:09,368 | INFO     | job.realtimelogging is not enabled
[2024-02-14 04:13:16] 2024-02-14 09:13:10,372 | INFO     | [payload] run_realtimelog thread has finished
[2024-02-14 04:13:16] 2024-02-14 09:13:11,520 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139886625265472)>', '<ExcThread(monitor, started 139886212413184)>']
[2024-02-14 04:13:16] 2024-02-14 09:13:11,860 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-02-14 04:13:16] 2024-02-14 09:13:11,860 | INFO     | [monitor] control thread has ended
[2024-02-14 04:13:16] 2024-02-14 09:13:16,544 | INFO     | end of generic workflow (traces error code: 0)
[2024-02-14 04:13:16] 2024-02-14 09:13:16,544 | INFO     | traces error code: 0
[2024-02-14 04:13:16] 2024-02-14 09:13:16,544 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-02-14 04:13:16] 2024-02-14 09:13:16,586 [wrapper] ==== pilot stdout END ====
[2024-02-14 04:13:16] 2024-02-14 09:13:16,601 [wrapper] ==== wrapper stdout RESUME ====
[2024-02-14 04:13:16] 2024-02-14 09:13:16,618 [wrapper] pilotpid: 1557353
[2024-02-14 04:13:16] 2024-02-14 09:13:16,630 [wrapper] Pilot exit status: 0
[2024-02-14 04:13:16] 2024-02-14 09:13:16,662 [wrapper] pandaids: 6109241462
[2024-02-14 04:13:16] 2024-02-14 09:13:16,702 [wrapper] cleanup: SIGTERM to supervisor_pilot 1572169 1557354
[2024-02-14 04:13:16] 2024-02-14 09:13:16,710 [wrapper] Test setup, not cleaning
[2024-02-14 04:13:16] 2024-02-14 09:13:16,721 [wrapper] ==== wrapper stdout END ====
[2024-02-14 04:13:16] 2024-02-14 09:13:16,734 [wrapper] ==== wrapper stderr END ====
[2024-02-14 04:13:16] 2024-02-14 09:13:16,754 [wrapper] apfmon messages muted
[2024-02-14 04:13:16]  *** Error codes and diagnostics ***
[2024-02-14 04:13:16]     "exeErrorCode": 0,
[2024-02-14 04:13:16]     "exeErrorDiag": "",
[2024-02-14 04:13:16]     "pilotErrorCode": 0,
[2024-02-14 04:13:16]     "pilotErrorDiag": "",
[2024-02-14 04:13:16]  *** Listing of results directory ***
[2024-02-14 04:13:16] total 45776
[2024-02-14 04:13:16] -rw-r--r-- 1 boinc boinc   441289 Feb 14 03:24 pilot3.tar.gz
[2024-02-14 04:13:16] -rwx------ 1 boinc boinc    31345 Feb 14 03:40 runpilot2-wrapper.sh
[2024-02-14 04:13:16] -rw-r--r-- 1 boinc boinc     4388 Feb 14 03:40 queuedata.json
[2024-02-14 04:13:16] -rw-r--r-- 1 boinc boinc      107 Feb 14 03:48 wrapper_26015_x86_64-pc-linux-gnu
[2024-02-14 04:13:16] -rwxr-xr-x 1 boinc boinc     7986 Feb 14 03:48 run_atlas
[2024-02-14 04:13:16] -rw-r--r-- 1 boinc boinc      112 Feb 14 03:48 job.xml
[2024-02-14 04:13:16] -rw-r--r-- 2 boinc boinc    17618 Feb 14 03:48 start_atlas.sh
[2024-02-14 04:13:16] drwxrwx--x 2 boinc boinc     4096 Feb 14 03:48 shared
[2024-02-14 04:13:16] -rw-r--r-- 2 boinc boinc   453816 Feb 14 03:48 input.tar.gz
[2024-02-14 04:13:16] -rw-r--r-- 1 boinc boinc     9512 Feb 14 03:48 init_data.xml
[2024-02-14 04:13:16] -rw-r--r-- 2 boinc boinc 39611081 Feb 14 03:48 EVNT.04972714._000022.pool.root.1
[2024-02-14 04:13:16] -rw-r--r-- 1 boinc boinc        0 Feb 14 03:48 boinc_lockfile
[2024-02-14 04:13:16] -rw-r--r-- 1 boinc boinc     2752 Feb 14 03:48 pandaJob.out
[2024-02-14 04:13:16] -rw------- 1 boinc boinc      424 Feb 14 03:48 setup.sh.local
[2024-02-14 04:13:16] -rw------- 1 boinc boinc   960911 Feb 14 03:48 agis_schedconf.cvmfs.json
[2024-02-14 04:13:16] -rw------- 1 boinc boinc  1341875 Feb 14 03:49 cric_ddmendpoints.json
[2024-02-14 04:13:16] drwx------ 4 boinc boinc     4096 Feb 14 03:50 pilot3
[2024-02-14 04:13:16] -rw------- 1 boinc boinc  1594869 Feb 14 04:06 output.1.d0c87284-f6ab-4497-aae4-53b37931a27b_16809.pool.root
[2024-02-14 04:13:16] -rw-r--r-- 1 boinc boinc      534 Feb 14 04:06 boinc_task_state.xml
[2024-02-14 04:13:16] -rw------- 1 boinc boinc      998 Feb 14 04:06 memory_monitor_summary.json
[2024-02-14 04:13:16] -rw------- 1 boinc boinc   156121 Feb 14 04:10 d0c87284-f6ab-4497-aae4-53b37931a27b_16809.1.job.log.tgz
[2024-02-14 04:13:16] -rw------- 1 boinc boinc     6589 Feb 14 04:12 heartbeat.json
[2024-02-14 04:13:16] -rw-r--r-- 1 boinc boinc     8192 Feb 14 04:13 boinc_mmap_file
[2024-02-14 04:13:16] -rw-r--r-- 1 boinc boinc       25 Feb 14 04:13 wrapper_checkpoint.txt
[2024-02-14 04:13:16] -rw------- 1 boinc boinc     3981 Feb 14 04:13 pilotlog.txt
[2024-02-14 04:13:16] -rw------- 1 boinc boinc   180098 Feb 14 04:13 d0c87284-f6ab-4497-aae4-53b37931a27b_16809.1.job.log
[2024-02-14 04:13:16] -rw------- 1 boinc boinc      464 Feb 14 04:13 output.list
[2024-02-14 04:13:16] -rw-r--r-- 1 boinc boinc      748 Feb 14 04:13 runtime_log
[2024-02-14 04:13:16] -rw------- 1 boinc boinc  1945600 Feb 14 04:13 result.tar.gz
[2024-02-14 04:13:16] -rw------- 1 boinc boinc      625 Feb 14 04:13 VypLDmXzPu4n7Olcko1bjSoqABFKDmABFKDmyeZQDmZpKKDmLPHHFo.diag
[2024-02-14 04:13:16] -rw-r--r-- 1 boinc boinc    11951 Feb 14 04:13 runtime_log.err
[2024-02-14 04:13:16] -rw-r--r-- 1 boinc boinc     2229 Feb 14 04:13 stderr.txt
[2024-02-14 04:13:16] HITS file was successfully produced:
[2024-02-14 04:13:16] -rw------- 1 boinc boinc 1594869 Feb 14 04:06 shared/HITS.pool.root.1
[2024-02-14 04:13:16]  *** Contents of shared directory: ***
[2024-02-14 04:13:16] total 42612
[2024-02-14 04:13:16] -rw-r--r-- 2 boinc boinc    17618 Feb 14 03:48 start_atlas.sh
[2024-02-14 04:13:16] -rw-r--r-- 2 boinc boinc   453816 Feb 14 03:48 input.tar.gz
[2024-02-14 04:13:16] -rw-r--r-- 2 boinc boinc 39611081 Feb 14 03:48 ATLAS.root_0
[2024-02-14 04:13:16] -rw------- 1 boinc boinc  1594869 Feb 14 04:06 HITS.pool.root.1
[2024-02-14 04:13:16] -rw------- 1 boinc boinc  1945600 Feb 14 04:13 result.tar.gz
04:13:18 (1553597): run_atlas exited; CPU time 445.653358
04:13:18 (1553597): called boinc_finish(0)

</stderr_txt>
]]>

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