Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
19:21:43 (1655658): wrapper (7.7.26015): starting
19:21:43 (1655658): wrapper: running run_atlas (--nthreads 1)
[2024-02-14 19:21:43] Arguments: --nthreads 1
[2024-02-14 19:21:43] Threads: 1
[2024-02-14 19:21:43] Checking for CVMFS
[2024-02-14 19:21:44] Probing /cvmfs/atlas.cern.ch... OK
[2024-02-14 19:21:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-02-14 19:21:44] Running cvmfs_config stat atlas.cern.ch
[2024-02-14 19:21:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-02-14 19:21:44] 2.9.2.0 1631162 3 39400 129400 0 74 2820579 4194305 453 130560 0 58826 99.975 35913 13068 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2024-02-14 19:21:44] CVMFS is ok
[2024-02-14 19:21:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-02-14 19:21:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-02-14 19:21:44] Small home clusters do not require a local http proxy but it is suggested if
[2024-02-14 19:21:44] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-02-14 19:21:44] Further information can be found at the LHC@home message board.
[2024-02-14 19:21:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-02-14 19:21:44] Checking for apptainer binary...
[2024-02-14 19:21:44] apptainer is not installed, using version from CVMFS
[2024-02-14 19:21:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-02-14 19:21:44] WC5950
[2024-02-14 19:21:44] apptainer works
[2024-02-14 19:21:44] Starting ATLAS job with PandaID=6109499124
[2024-02-14 19:21:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-02-14 19:45:19]  *** The last 200 lines of the pilot log: ***
[2024-02-14 19:45:19] 2024-02-15 00:44:17,572 | WARNING  | aborting job monitor tasks since payload process 1666727 is not running
[2024-02-14 19:45:19] 2024-02-15 00:44:20,075 | INFO     | monitor loop #172: job 0:6109499124 is in state 'stageout'
[2024-02-14 19:45:19] 2024-02-15 00:44:20,075 | WARNING  | aborting job monitor tasks since payload process 1666727 is not running
[2024-02-14 19:45:19] 2024-02-15 00:44:22,582 | INFO     | monitor loop #173: job 0:6109499124 is in state 'stageout'
[2024-02-14 19:45:19] 2024-02-15 00:44:22,582 | WARNING  | aborting job monitor tasks since payload process 1666727 is not running
[2024-02-14 19:45:19] 2024-02-15 00:44:25,086 | INFO     | monitor loop #174: job 0:6109499124 is in state 'stageout'
[2024-02-14 19:45:19] 2024-02-15 00:44:25,087 | WARNING  | aborting job monitor tasks since payload process 1666727 is not running
[2024-02-14 19:45:19] 2024-02-15 00:44:27,588 | INFO     | monitor loop #175: job 0:6109499124 is in state 'stageout'
[2024-02-14 19:45:19] 2024-02-15 00:44:27,588 | WARNING  | aborting job monitor tasks since payload process 1666727 is not running
[2024-02-14 19:45:19] 2024-02-15 00:44:28,376 | INFO     | [attempt=2/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2024-02-14 19:45:19] 2024-02-15 00:44:29,028 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2024-02-14 19:45:19] 2024-02-15 00:44:29,028 | INFO     | will try again after 15s..
[2024-02-14 19:45:19] 2024-02-15 00:44:30,091 | INFO     | monitor loop #176: job 0:6109499124 is in state 'stageout'
[2024-02-14 19:45:19] 2024-02-15 00:44:30,091 | WARNING  | aborting job monitor tasks since payload process 1666727 is not running
[2024-02-14 19:45:19] 2024-02-15 00:44:32,597 | INFO     | monitor loop #177: job 0:6109499124 is in state 'stageout'
[2024-02-14 19:45:19] 2024-02-15 00:44:32,597 | WARNING  | aborting job monitor tasks since payload process 1666727 is not running
[2024-02-14 19:45:19] 2024-02-15 00:44:35,104 | INFO     | monitor loop #178: job 0:6109499124 is in state 'stageout'
[2024-02-14 19:45:19] 2024-02-15 00:44:35,104 | WARNING  | aborting job monitor tasks since payload process 1666727 is not running
[2024-02-14 19:45:19] 2024-02-15 00:44:37,608 | INFO     | monitor loop #179: job 0:6109499124 is in state 'stageout'
[2024-02-14 19:45:19] 2024-02-15 00:44:37,608 | WARNING  | aborting job monitor tasks since payload process 1666727 is not running
[2024-02-14 19:45:19] 2024-02-15 00:44:40,116 | INFO     | monitor loop #180: job 0:6109499124 is in state 'stageout'
[2024-02-14 19:45:19] 2024-02-15 00:44:40,116 | WARNING  | aborting job monitor tasks since payload process 1666727 is not running
[2024-02-14 19:45:19] 2024-02-15 00:44:42,636 | INFO     | monitor loop #181: job 0:6109499124 is in state 'stageout'
[2024-02-14 19:45:19] 2024-02-15 00:44:42,636 | WARNING  | aborting job monitor tasks since payload process 1666727 is not running
[2024-02-14 19:45:19] 2024-02-15 00:44:44,100 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2024-02-14 19:45:19] 2024-02-15 00:44:44,490 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2024-02-14 19:45:19] 2024-02-15 00:44:44,490 | WARNING  | cache file=/var/lib/boinc-client/slots/13/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/13/ag
[2024-02-14 19:45:19] 2024-02-15 00:44:44,527 | INFO     | transferring file 45721544-7f06-4c3f-a7bf-2f8f7edb2ecf_27306.1.job.log.tgz from /var/lib/boinc-client/slots/13/PanDA_Pilot-6109499124/45721544-7f06-4c3f-a7bf-2f8f7
[2024-02-14 19:45:19] 2024-02-15 00:44:44,527 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/13/PanDA_Pilot-6109499124/45721544-7f06-4c3f-a7bf-2f8f7edb2ecf_27306.1.job.log.tgz /var/lib/boinc-cl
[2024-02-14 19:45:19] 2024-02-15 00:44:44,551 | INFO     | Adding to output.list: 45721544-7f06-4c3f-a7bf-2f8f7edb2ecf_27306.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/6b/da/45721544-7f06-
[2024-02-14 19:45:19] 2024-02-15 00:44:44,552 | INFO     | summary of transferred files:
[2024-02-14 19:45:19] 2024-02-15 00:44:44,552 | INFO     |  -- lfn=45721544-7f06-4c3f-a7bf-2f8f7edb2ecf_27306.1.job.log.tgz, status_code=0, status=transferred
[2024-02-14 19:45:19] 2024-02-15 00:44:44,552 | INFO     | stage-out finished correctly
[2024-02-14 19:45:19] 2024-02-15 00:44:45,139 | INFO     | monitor loop #182: job 0:6109499124 is in state 'finished'
[2024-02-14 19:45:19] 2024-02-15 00:44:45,139 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-14 19:45:19] 2024-02-15 00:44:47,340 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-02-14 19:45:19] 2024-02-15 00:44:47,640 | INFO     | monitor loop #183: job 0:6109499124 is in state 'finished'
[2024-02-14 19:45:19] 2024-02-15 00:44:47,640 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-14 19:45:19] 2024-02-15 00:44:49,676 | INFO     | job 6109499124 has state=finished
[2024-02-14 19:45:19] 2024-02-15 00:44:49,676 | INFO     | preparing for final server update for job 6109499124 in state='finished'
[2024-02-14 19:45:19] 2024-02-15 00:44:49,677 | INFO     | executing command: curl --connect-timeout 20 --max-time 120 -H "Content-Type: application/json" -X POST --upload-file /var/lib/boinc-client/slots/13/PanDA_Pilot-61
[2024-02-14 19:45:19] 2024-02-15 00:44:50,143 | INFO     | monitor loop #184: job 0:6109499124 is in state 'finished'
[2024-02-14 19:45:19] 2024-02-15 00:44:50,143 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-14 19:45:19] 2024-02-15 00:44:52,650 | INFO     | monitor loop #185: job 0:6109499124 is in state 'finished'
[2024-02-14 19:45:19] 2024-02-15 00:44:52,651 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-14 19:45:19] 2024-02-15 00:44:53,970 | INFO     | this job has now completed (state=finished)
[2024-02-14 19:45:19] 2024-02-15 00:44:53,970 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-02-14 19:45:19] 2024-02-15 00:44:53,970 | INFO     | job 6109499124 has finished - writing final server update
[2024-02-14 19:45:19] 2024-02-15 00:44:53,970 | INFO     | total number of processed events: 2 (read)
[2024-02-14 19:45:19] 2024-02-15 00:44:53,989 | INFO     | executing command: lscpu
[2024-02-14 19:45:19] 2024-02-15 00:44:54,007 | INFO     | found 16 cores (16 cores per socket, 1 sockets)
[2024-02-14 19:45:19] 2024-02-15 00:44:54,007 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-02-14 19:45:19] 2024-02-15 00:44:54,033 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-02-14 19:45:19] 2024-02-15 00:44:55,164 | INFO     | monitor loop #186: job 0:6109499124 is in state 'finished'
[2024-02-14 19:45:19] 2024-02-15 00:44:55,165 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-14 19:45:19] 2024-02-15 00:44:57,672 | INFO     | monitor loop #187: job 0:6109499124 is in state 'finished'
[2024-02-14 19:45:19] 2024-02-15 00:44:57,672 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-14 19:45:19] 2024-02-15 00:44:58,110 | INFO     | CPU arch script returned: x86-64-v3
[2024-02-14 19:45:19] 2024-02-15 00:44:58,110 | INFO     | using path: /var/lib/boinc-client/slots/13/PanDA_Pilot-6109499124/memory_monitor_summary.json (trf name=prmon)
[2024-02-14 19:45:19] 2024-02-15 00:44:58,111 | INFO     | extracted standard info from prmon json
[2024-02-14 19:45:19] 2024-02-15 00:44:58,111 | INFO     | extracted standard memory fields from prmon json
[2024-02-14 19:45:19] 2024-02-15 00:44:58,112 | WARNING  | wrong length of table data, x=[1707957078.0, 1707957139.0, 1707957200.0, 1707957261.0, 1707957322.0, 1707957383.0, 1707957444.0], y=[889402.0, 992624.0, 1126398.0,
[2024-02-14 19:45:19] 2024-02-15 00:44:58,112 | INFO     | ..............................
[2024-02-14 19:45:19] 2024-02-15 00:44:58,112 | INFO     | . Timing measurements:
[2024-02-14 19:45:19] 2024-02-15 00:44:58,112 | INFO     | . get job = 69 s
[2024-02-14 19:45:19] 2024-02-15 00:44:58,112 | INFO     | . initial setup = 70 s
[2024-02-14 19:45:19] 2024-02-15 00:44:58,112 | INFO     | . payload setup = 7 s
[2024-02-14 19:45:19] 2024-02-15 00:44:58,112 | INFO     | . stage-in = 89 s
[2024-02-14 19:45:19] 2024-02-15 00:44:58,112 | INFO     | . payload execution = 830 s
[2024-02-14 19:45:19] 2024-02-15 00:44:58,112 | INFO     | . stage-out = 281 s
[2024-02-14 19:45:19] 2024-02-15 00:44:58,112 | INFO     | . log creation = 0 s
[2024-02-14 19:45:19] 2024-02-15 00:44:58,113 | INFO     | ..............................
[2024-02-14 19:45:19] 2024-02-15 00:44:58,168 | INFO     | 
[2024-02-14 19:45:19] 2024-02-15 00:44:58,168 | INFO     | job summary report
[2024-02-14 19:45:19] 2024-02-15 00:44:58,168 | INFO     | --------------------------------------------------
[2024-02-14 19:45:19] 2024-02-15 00:44:58,168 | INFO     | PanDA job id: 6109499124
[2024-02-14 19:45:19] 2024-02-15 00:44:58,168 | INFO     | task id: NULL
[2024-02-14 19:45:19] 2024-02-15 00:44:58,168 | INFO     | errors: (none)
[2024-02-14 19:45:19] 2024-02-15 00:44:58,168 | INFO     | status: LOG_TRANSFER = DONE 
[2024-02-14 19:45:19] 2024-02-15 00:44:58,168 | INFO     | pilot state: finished 
[2024-02-14 19:45:19] 2024-02-15 00:44:58,168 | INFO     | transexitcode: 0
[2024-02-14 19:45:19] 2024-02-15 00:44:58,168 | INFO     | exeerrorcode: 0
[2024-02-14 19:45:19] 2024-02-15 00:44:58,168 | INFO     | exeerrordiag: 
[2024-02-14 19:45:19] 2024-02-15 00:44:58,168 | INFO     | exitcode: 0
[2024-02-14 19:45:19] 2024-02-15 00:44:58,168 | INFO     | exitmsg: OK
[2024-02-14 19:45:19] 2024-02-15 00:44:58,168 | INFO     | cpuconsumptiontime: 455 s
[2024-02-14 19:45:19] 2024-02-15 00:44:58,168 | INFO     | nevents: 2
[2024-02-14 19:45:19] 2024-02-15 00:44:58,168 | INFO     | neventsw: 0
[2024-02-14 19:45:19] 2024-02-15 00:44:58,169 | INFO     | pid: 1666727
[2024-02-14 19:45:19] 2024-02-15 00:44:58,169 | INFO     | pgrp: 1666727
[2024-02-14 19:45:19] 2024-02-15 00:44:58,169 | INFO     | corecount: 1
[2024-02-14 19:45:19] 2024-02-15 00:44:58,169 | INFO     | event service: False
[2024-02-14 19:45:19] 2024-02-15 00:44:58,169 | INFO     | sizes: {0: 2407172, 1: 2407172, 12: 2407346, 22: 2407374, 33: 2407402, 43: 2407430, 54: 2407586, 65: 2407614, 75: 2407642, 86: 2407670, 94: 2407758, 96: 2408066, 8
[2024-02-14 19:45:19] 2024-02-15 00:44:58,169 | INFO     | --------------------------------------------------
[2024-02-14 19:45:19] 2024-02-15 00:44:58,169 | INFO     | 
[2024-02-14 19:45:19] 2024-02-15 00:44:58,169 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/13
[2024-02-14 19:45:19] 2024-02-15 00:44:58,188 | INFO     | queue jobs had 0 job(s) [purged]
[2024-02-14 19:45:19] 2024-02-15 00:44:58,188 | INFO     | queue payloads had 0 job(s) [purged]
[2024-02-14 19:45:19] 2024-02-15 00:44:58,188 | INFO     | queue data_in had 0 job(s) [purged]
[2024-02-14 19:45:19] 2024-02-15 00:44:58,188 | INFO     | queue data_out had 0 job(s) [purged]
[2024-02-14 19:45:19] 2024-02-15 00:44:58,188 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-02-14 19:45:19] 2024-02-15 00:44:58,188 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-02-14 19:45:19] 2024-02-15 00:44:58,188 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-02-14 19:45:19] 2024-02-15 00:44:58,189 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-02-14 19:45:19] 2024-02-15 00:44:58,189 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-02-14 19:45:19] 2024-02-15 00:44:58,189 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-02-14 19:45:19] 2024-02-15 00:44:58,189 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-02-14 19:45:19] 2024-02-15 00:44:58,189 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-02-14 19:45:19] 2024-02-15 00:44:58,189 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-02-14 19:45:19] 2024-02-15 00:44:58,189 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-02-14 19:45:19] 2024-02-15 00:44:58,189 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-02-14 19:45:19] 2024-02-15 00:44:58,189 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-02-14 19:45:19] 2024-02-15 00:44:58,189 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-02-14 19:45:19] 2024-02-15 00:44:58,189 | INFO     | queue completed_jobids has 1 job(s)
[2024-02-14 19:45:19] 2024-02-15 00:44:58,189 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-02-14 19:45:19] 2024-02-15 00:44:58,189 | INFO     | queue messages had 0 job(s) [purged]
[2024-02-14 19:45:19] 2024-02-15 00:44:58,189 | INFO     | job 6109499124 has completed (purged errors)
[2024-02-14 19:45:19] 2024-02-15 00:44:58,189 | INFO     | overall cleanup function is called
[2024-02-14 19:45:19] 2024-02-15 00:44:59,196 | INFO     | --- collectZombieJob: --- 10, [1666727]
[2024-02-14 19:45:19] 2024-02-15 00:44:59,196 | INFO     | zombie collector waiting for pid 1666727
[2024-02-14 19:45:19] 2024-02-15 00:44:59,196 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-02-14 19:45:19] 2024-02-15 00:45:00,200 | INFO     | collected zombie processes
[2024-02-14 19:45:19] 2024-02-15 00:45:00,200 | INFO     | will now attempt to kill all subprocesses of pid=1666727
[2024-02-14 19:45:19] 2024-02-15 00:45:00,270 | INFO     | process IDs to be killed: [1666727] (in reverse order)
[2024-02-14 19:45:19] 2024-02-15 00:45:00,312 | WARNING  | found no corresponding commands to process id(s)
[2024-02-14 19:45:19] 2024-02-15 00:45:00,313 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-02-14 19:45:19] 2024-02-15 00:45:00,315 | INFO     | did not find any defunct processes belonging to 1666727
[2024-02-14 19:45:19] 2024-02-15 00:45:00,317 | INFO     | did not find any defunct processes belonging to 1666727
[2024-02-14 19:45:19] 2024-02-15 00:45:00,317 | INFO     | ready for new job
[2024-02-14 19:45:19] 2024-02-15 00:45:00,318 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-02-14 19:45:19] 2024-02-15 00:45:00,318 | INFO     | **************************************
[2024-02-14 19:45:19] 2024-02-15 00:45:00,318 | INFO     | ***  PanDA Pilot version 3.7.0.36  ***
[2024-02-14 19:45:19] 2024-02-15 00:45:00,318 | INFO     | **************************************
[2024-02-14 19:45:19] 2024-02-15 00:45:00,318 | INFO     | 
[2024-02-14 19:45:19] 2024-02-15 00:45:00,337 | INFO     | architecture information:
[2024-02-14 19:45:19] 2024-02-15 00:45:00,337 | INFO     | executing command: cat /etc/os-release
[2024-02-14 19:45:19] 2024-02-15 00:45:00,354 | INFO     | cat /etc/os-release:
[2024-02-14 19:45:19] NAME="CentOS Linux"
[2024-02-14 19:45:19] VERSION="7 (Core)"
[2024-02-14 19:45:19] ID="centos"
[2024-02-14 19:45:19] ID_LIKE="rhel fedora"
[2024-02-14 19:45:19] VERSION_ID="7"
[2024-02-14 19:45:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-02-14 19:45:19] ANSI_COLOR="0;31"
[2024-02-14 19:45:19] CPE_NAME="cpe:/o:centos:centos:7"
[2024-02-14 19:45:19] HOME_URL="https://www.centos.org/"
[2024-02-14 19:45:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-02-14 19:45:19] 
[2024-02-14 19:45:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-02-14 19:45:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-02-14 19:45:19] REDHAT_SUPPORT_PRODUCT="centos"
[2024-02-14 19:45:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-02-14 19:45:19] 
[2024-02-14 19:45:19] 2024-02-15 00:45:00,354 | INFO     | **************************************
[2024-02-14 19:45:19] 2024-02-15 00:45:00,856 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/13
[2024-02-14 19:45:19] 2024-02-15 00:45:00,875 | INFO     | sufficient remaining disk space (372103970816 B)
[2024-02-14 19:45:19] 2024-02-15 00:45:00,875 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-02-14 19:45:19] 2024-02-15 00:45:00,875 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-02-14 19:45:19] 2024-02-15 00:45:00,875 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-02-14 19:45:19] 2024-02-15 00:45:00,876 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-02-14 19:45:19] 2024-02-15 00:45:00,876 | INFO     | found 0 job(s) in 20 queues
[2024-02-14 19:45:19] 2024-02-15 00:45:00,876 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-02-14 19:45:19] 2024-02-15 00:45:00,876 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-02-14 19:45:19] 2024-02-15 00:45:01,176 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-02-14 19:45:19] 2024-02-15 00:45:01,176 | INFO     | aborting loop
[2024-02-14 19:45:19] 2024-02-15 00:45:01,880 | INFO     | [job] retrieve thread has finished
[2024-02-14 19:45:19] 2024-02-15 00:45:01,896 | INFO     | [job] create_data_payload thread has finished
[2024-02-14 19:45:19] 2024-02-15 00:45:01,976 | INFO     | [payload] validate_pre thread has finished
[2024-02-14 19:45:19] 2024-02-15 00:45:02,040 | INFO     | [payload] validate_post thread has finished
[2024-02-14 19:45:19] 2024-02-15 00:45:02,180 | INFO     | [job] job monitor thread has finished
[2024-02-14 19:45:19] 2024-02-15 00:45:02,420 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-02-14 19:45:19] 2024-02-15 00:45:02,672 | INFO     | [payload] control thread has finished
[2024-02-14 19:45:19] 2024-02-15 00:45:02,680 | INFO     | [data] copytool_in thread has finished
[2024-02-14 19:45:19] 2024-02-15 00:45:02,692 | INFO     | [job] control thread has finished
[2024-02-14 19:45:19] 2024-02-15 00:45:02,756 | INFO     | [data] control thread has finished
[2024-02-14 19:45:19] 2024-02-15 00:45:02,880 | INFO     | [data] copytool_out thread has finished
[2024-02-14 19:45:19] 2024-02-15 00:45:02,888 | INFO     | [payload] execute_payloads thread has finished
[2024-02-14 19:45:19] 2024-02-15 00:45:03,136 | INFO     | [job] validate thread has finished
[2024-02-14 19:45:19] 2024-02-15 00:45:03,172 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-02-14 19:45:19] 2024-02-15 00:45:03,412 | INFO     | [payload] failed_post thread has finished
[2024-02-14 19:45:19] 2024-02-15 00:45:04,176 | INFO     | [job] queue monitor thread has finished
[2024-02-14 19:45:19] 2024-02-15 00:45:06,424 | INFO     | [data] queue_monitor thread has finished
[2024-02-14 19:45:19] 2024-02-15 00:45:10,936 | INFO     | job.realtimelogging is not enabled
[2024-02-14 19:45:19] 2024-02-15 00:45:11,940 | INFO     | [payload] run_realtimelog thread has finished
[2024-02-14 19:45:19] 2024-02-15 00:45:13,788 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139877138499392)>', '<ExcThread(monitor, started 139876213192448)>']
[2024-02-14 19:45:19] 2024-02-15 00:45:13,932 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-02-14 19:45:19] 2024-02-15 00:45:13,932 | INFO     | [monitor] control thread has ended
[2024-02-14 19:45:19] 2024-02-15 00:45:18,816 | INFO     | end of generic workflow (traces error code: 0)
[2024-02-14 19:45:19] 2024-02-15 00:45:18,816 | INFO     | traces error code: 0
[2024-02-14 19:45:19] 2024-02-15 00:45:18,816 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-02-14 19:45:19] 2024-02-15 00:45:18,852 [wrapper] ==== pilot stdout END ====
[2024-02-14 19:45:19] 2024-02-15 00:45:18,855 [wrapper] ==== wrapper stdout RESUME ====
[2024-02-14 19:45:19] 2024-02-15 00:45:18,857 [wrapper] pilotpid: 1659419
[2024-02-14 19:45:19] 2024-02-15 00:45:18,859 [wrapper] Pilot exit status: 0
[2024-02-14 19:45:19] 2024-02-15 00:45:18,881 [wrapper] pandaids: 6109499124
[2024-02-14 19:45:19] 2024-02-15 00:45:18,930 [wrapper] cleanup: SIGTERM to supervisor_pilot 1674470 1659420
[2024-02-14 19:45:19] 2024-02-15 00:45:18,938 [wrapper] Test setup, not cleaning
[2024-02-14 19:45:19] 2024-02-15 00:45:18,944 [wrapper] ==== wrapper stdout END ====
[2024-02-14 19:45:19] 2024-02-15 00:45:18,946 [wrapper] ==== wrapper stderr END ====
[2024-02-14 19:45:19] 2024-02-15 00:45:18,950 [wrapper] apfmon messages muted
[2024-02-14 19:45:19]  *** Error codes and diagnostics ***
[2024-02-14 19:45:19]     "exeErrorCode": 0,
[2024-02-14 19:45:19]     "exeErrorDiag": "",
[2024-02-14 19:45:19]     "pilotErrorCode": 0,
[2024-02-14 19:45:19]     "pilotErrorDiag": "",
[2024-02-14 19:45:19]  *** Listing of results directory ***
[2024-02-14 19:45:19] total 44884
[2024-02-14 19:45:19] -rwx------ 1 boinc boinc    31345 Feb 14 09:06 runpilot2-wrapper.sh
[2024-02-14 19:45:19] -rw-r--r-- 1 boinc boinc     4388 Feb 14 09:06 queuedata.json
[2024-02-14 19:45:19] -rw-r--r-- 1 boinc boinc   441289 Feb 14 09:06 pilot3.tar.gz
[2024-02-14 19:45:19] -rw-r--r-- 1 boinc boinc      107 Feb 14 19:21 wrapper_26015_x86_64-pc-linux-gnu
[2024-02-14 19:45:19] -rwxr-xr-x 1 boinc boinc     7986 Feb 14 19:21 run_atlas
[2024-02-14 19:45:19] -rw-r--r-- 1 boinc boinc      112 Feb 14 19:21 job.xml
[2024-02-14 19:45:19] -rw-r--r-- 2 boinc boinc    17618 Feb 14 19:21 start_atlas.sh
[2024-02-14 19:45:19] drwxrwx--x 2 boinc boinc     4096 Feb 14 19:21 shared
[2024-02-14 19:45:19] -rw-r--r-- 2 boinc boinc   453811 Feb 14 19:21 input.tar.gz
[2024-02-14 19:45:19] -rw-r--r-- 1 boinc boinc     9513 Feb 14 19:21 init_data.xml
[2024-02-14 19:45:19] -rw-r--r-- 2 boinc boinc 38288972 Feb 14 19:21 EVNT.04972714._000032.pool.root.1
[2024-02-14 19:45:19] -rw-r--r-- 1 boinc boinc        0 Feb 14 19:21 boinc_lockfile
[2024-02-14 19:45:19] -rw-r--r-- 1 boinc boinc     2757 Feb 14 19:21 pandaJob.out
[2024-02-14 19:45:19] -rw------- 1 boinc boinc      424 Feb 14 19:21 setup.sh.local
[2024-02-14 19:45:19] -rw------- 1 boinc boinc  1341875 Feb 14 19:23 cric_ddmendpoints.json
[2024-02-14 19:45:19] -rw------- 1 boinc boinc   960861 Feb 14 19:23 agis_schedconf.cvmfs.json
[2024-02-14 19:45:19] drwx------ 4 boinc boinc     4096 Feb 14 19:24 pilot3
[2024-02-14 19:45:19] -rw-r--r-- 1 boinc boinc      533 Feb 14 19:39 boinc_task_state.xml
[2024-02-14 19:45:19] -rw------- 1 boinc boinc  1793910 Feb 14 19:39 output.1.45721544-7f06-4c3f-a7bf-2f8f7edb2ecf_27306.pool.root
[2024-02-14 19:45:19] -rw------- 1 boinc boinc     1002 Feb 14 19:39 memory_monitor_summary.json
[2024-02-14 19:45:19] -rw------- 1 boinc boinc   155969 Feb 14 19:42 45721544-7f06-4c3f-a7bf-2f8f7edb2ecf_27306.1.job.log.tgz
[2024-02-14 19:45:19] -rw------- 1 boinc boinc     6568 Feb 14 19:44 heartbeat.json
[2024-02-14 19:45:19] -rw-r--r-- 1 boinc boinc       25 Feb 14 19:45 wrapper_checkpoint.txt
[2024-02-14 19:45:19] -rw-r--r-- 1 boinc boinc     8192 Feb 14 19:45 boinc_mmap_file
[2024-02-14 19:45:19] -rw------- 1 boinc boinc     4105 Feb 14 19:45 pilotlog.txt
[2024-02-14 19:45:19] -rw------- 1 boinc boinc   171113 Feb 14 19:45 45721544-7f06-4c3f-a7bf-2f8f7edb2ecf_27306.1.job.log
[2024-02-14 19:45:19] -rw------- 1 boinc boinc      464 Feb 14 19:45 output.list
[2024-02-14 19:45:19] -rw-r--r-- 1 boinc boinc      748 Feb 14 19:45 runtime_log
[2024-02-14 19:45:19] -rw------- 1 boinc boinc  2140160 Feb 14 19:45 result.tar.gz
[2024-02-14 19:45:19] -rw-r--r-- 1 boinc boinc    11968 Feb 14 19:45 runtime_log.err
[2024-02-14 19:45:19] -rw------- 1 boinc boinc      625 Feb 14 19:45 ahtKDma5Uu4n7Olcko1bjSoqABFKDmABFKDmyeZQDmBqKKDmf0vMIo.diag
[2024-02-14 19:45:19] -rw-r--r-- 1 boinc boinc    23671 Feb 14 19:45 stderr.txt
[2024-02-14 19:45:19] HITS file was successfully produced:
[2024-02-14 19:45:19] -rw------- 1 boinc boinc 1793910 Feb 14 19:39 shared/HITS.pool.root.1
[2024-02-14 19:45:19]  *** Contents of shared directory: ***
[2024-02-14 19:45:19] total 41704
[2024-02-14 19:45:19] -rw-r--r-- 2 boinc boinc    17618 Feb 14 19:21 start_atlas.sh
[2024-02-14 19:45:19] -rw-r--r-- 2 boinc boinc   453811 Feb 14 19:21 input.tar.gz
[2024-02-14 19:45:19] -rw-r--r-- 2 boinc boinc 38288972 Feb 14 19:21 ATLAS.root_0
[2024-02-14 19:45:19] -rw------- 1 boinc boinc  1793910 Feb 14 19:39 HITS.pool.root.1
[2024-02-14 19:45:19] -rw------- 1 boinc boinc  2140160 Feb 14 19:45 result.tar.gz
19:45:20 (1655658): run_atlas exited; CPU time 453.266803
19:45:20 (1655658): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN