Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
07:41:52 (227917): wrapper (7.7.26015): starting
07:41:52 (227917): wrapper: running run_atlas (--nthreads 4)
[2024-02-19 07:41:52] Arguments: --nthreads 4
[2024-02-19 07:41:52] Threads: 4
[2024-02-19 07:41:52] Checking for CVMFS
[2024-02-19 07:41:52] Probing /cvmfs/atlas.cern.ch... OK
[2024-02-19 07:41:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-02-19 07:41:52] Running cvmfs_config stat atlas.cern.ch
[2024-02-19 07:41:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-02-19 07:41:53] 2.11.1.0 81175 43744 93320 129574 0 115 2325640 4194304 1645 130560 1 15466695 99.299 16331087 1577 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2024-02-19 07:41:53] CVMFS is ok
[2024-02-19 07:41:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-02-19 07:41:53] Small home clusters do not require a local http proxy but it is suggested if
[2024-02-19 07:41:53] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-02-19 07:41:53] Further information can be found at the LHC@home message board.
[2024-02-19 07:41:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-02-19 07:41:53] Checking for apptainer binary...
[2024-02-19 07:41:53] apptainer is not installed, using version from CVMFS
[2024-02-19 07:41:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-02-19 07:41:53] 3070Ti
[2024-02-19 07:41:53] apptainer works
[2024-02-19 07:41:53] Set ATHENA_PROC_NUMBER=4
[2024-02-19 07:41:53] Set ATHENA_CORE_NUMBER=4
[2024-02-19 07:41:53] Starting ATLAS job with PandaID=6115752019
[2024-02-19 07:41:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-02-19 07:57:48]  *** The last 200 lines of the pilot log: ***
[2024-02-19 07:57:48] 2024-02-19 12:57:26,412 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2024-02-19 07:57:48]  activity=['pl', 'pw', 'w', 'default']
[2024-02-19 07:57:48]  allow_lan=True
[2024-02-19 07:57:48]  allow_wan=False
[2024-02-19 07:57:48]  checkinputsize=True
[2024-02-19 07:57:48]  checksum={'adler32': '2c49b1cf'}
[2024-02-19 07:57:48]  dataset=hc_test.gangarbt.hc20286389.tid1184.BOINC-TEST.152
[2024-02-19 07:57:48]  ddm_activity=['write_lan', 'write_wan']
[2024-02-19 07:57:48]  ddmendpoint=NDGF-T1_DATADISK
[2024-02-19 07:57:48]  direct_access_lan=False
[2024-02-19 07:57:48]  direct_access_wan=False
[2024-02-19 07:57:48]  domain=
[2024-02-19 07:57:48]  filesize=155306
[2024-02-19 07:57:48]  filetype=log
[2024-02-19 07:57:48]  guid=bd3bd727-0538-4dab-94ca-000ee0f5abe1
[2024-02-19 07:57:48]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-02-19 07:57:48]  is_tar=False
[2024-02-19 07:57:48]  lfn=8d1036df-afa4-4ccb-a1ba-d48d9935da41_68468.1.job.log.tgz
[2024-02-19 07:57:48]  mtime=0
[2024-02-19 07:57:48]  protocol_id=None
[2024-02-19 07:57:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-02-19 07:57:48]  replicas=None
[2024-02-19 07:57:48]  scope=hc_test
[2024-02-19 07:57:48]  status=None
[2024-02-19 07:57:48]  status_code=0
[2024-02-19 07:57:48]  storage_token=
[2024-02-19 07:57:48]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6115752019/8d1036df-afa4-4ccb-a1ba-d48d9935da41_68468.1.job.log.tgz
[2024-02-19 07:57:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/63/8f/8d1036df-afa4-4ccb-a1ba-d48d9935da41_68468.1.job.log.tgz
[2024-02-19 07:57:48]  workdir=None
[2024-02-19 07:57:48] ]
[2024-02-19 07:57:48] 2024-02-19 12:57:26,447 | INFO     | transferring file 8d1036df-afa4-4ccb-a1ba-d48d9935da41_68468.1.job.log.tgz from /var/lib/boinc-client/slots/1/PanDA_Pilot-6115752019/8d1036df-afa4-4ccb-a1ba-d48d99
[2024-02-19 07:57:48] 2024-02-19 12:57:26,447 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6115752019/8d1036df-afa4-4ccb-a1ba-d48d9935da41_68468.1.job.log.tgz /var/lib/boinc-cli
[2024-02-19 07:57:48] 2024-02-19 12:57:26,463 | INFO     | adding to output.list: 8d1036df-afa4-4ccb-a1ba-d48d9935da41_68468.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/63/8f/8d1036df-afa4-
[2024-02-19 07:57:48] 2024-02-19 12:57:26,464 | INFO     | summary of transferred files:
[2024-02-19 07:57:48] 2024-02-19 12:57:26,464 | INFO     |  -- lfn=8d1036df-afa4-4ccb-a1ba-d48d9935da41_68468.1.job.log.tgz, status_code=0, status=transferred
[2024-02-19 07:57:48] 2024-02-19 12:57:26,464 | INFO     | stage-out finished correctly
[2024-02-19 07:57:48] 2024-02-19 12:57:27,873 | INFO     | monitor loop #80: job 0:6115752019 is in state 'finished'
[2024-02-19 07:57:48] 2024-02-19 12:57:27,873 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-19 07:57:48] 2024-02-19 12:57:28,777 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-02-19 07:57:48] 2024-02-19 12:57:30,376 | INFO     | monitor loop #81: job 0:6115752019 is in state 'finished'
[2024-02-19 07:57:48] 2024-02-19 12:57:30,376 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-19 07:57:48] 2024-02-19 12:57:30,658 | INFO     | job 6115752019 has state=finished
[2024-02-19 07:57:48] 2024-02-19 12:57:30,658 | INFO     | preparing for final server update for job 6115752019 in state='finished'
[2024-02-19 07:57:48] 2024-02-19 12:57:30,658 | INFO     | this job has now completed (state=finished)
[2024-02-19 07:57:48] 2024-02-19 12:57:30,658 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-02-19 07:57:48] 2024-02-19 12:57:30,658 | INFO     | job 6115752019 has finished - writing final server update
[2024-02-19 07:57:48] 2024-02-19 12:57:30,658 | INFO     | total number of processed events: 2 (read)
[2024-02-19 07:57:48] 2024-02-19 12:57:30,666 | INFO     | executing command: lscpu
[2024-02-19 07:57:48] 2024-02-19 12:57:30,700 | INFO     | found 16 cores (16 cores per socket, 1 sockets)
[2024-02-19 07:57:48] 2024-02-19 12:57:30,700 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-02-19 07:57:48] 2024-02-19 12:57:30,731 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-02-19 07:57:48] 2024-02-19 12:57:32,878 | INFO     | monitor loop #82: job 0:6115752019 is in state 'finished'
[2024-02-19 07:57:48] 2024-02-19 12:57:32,878 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-19 07:57:48] 2024-02-19 12:57:33,810 | INFO     | CPU arch script returned: x86-64-v3
[2024-02-19 07:57:48] 2024-02-19 12:57:33,811 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6115752019/memory_monitor_summary.json (trf name=prmon)
[2024-02-19 07:57:48] 2024-02-19 12:57:33,811 | INFO     | extracted standard info from prmon json
[2024-02-19 07:57:48] 2024-02-19 12:57:33,812 | INFO     | extracted standard memory fields from prmon json
[2024-02-19 07:57:48] 2024-02-19 12:57:33,812 | INFO     | fitting pss+swap vs Time
[2024-02-19 07:57:48] 2024-02-19 12:57:33,812 | INFO     | current memory leak: 1517.36 B/s (using 8 data points, chi2=0.07)
[2024-02-19 07:57:48] 2024-02-19 12:57:33,813 | INFO     | ..............................
[2024-02-19 07:57:48] 2024-02-19 12:57:33,813 | INFO     | . Timing measurements:
[2024-02-19 07:57:48] 2024-02-19 12:57:33,813 | INFO     | . get job = 0 s
[2024-02-19 07:57:48] 2024-02-19 12:57:33,813 | INFO     | . initial setup = 1 s
[2024-02-19 07:57:48] 2024-02-19 12:57:33,813 | INFO     | . payload setup = 6 s
[2024-02-19 07:57:48] 2024-02-19 12:57:33,813 | INFO     | . stage-in = 0 s
[2024-02-19 07:57:48] 2024-02-19 12:57:33,813 | INFO     | . payload execution = 902 s
[2024-02-19 07:57:48] 2024-02-19 12:57:33,813 | INFO     | . stage-out = 0 s
[2024-02-19 07:57:48] 2024-02-19 12:57:33,813 | INFO     | . log creation = 0 s
[2024-02-19 07:57:48] 2024-02-19 12:57:33,813 | INFO     | ..............................
[2024-02-19 07:57:48] 2024-02-19 12:57:33,882 | INFO     | 
[2024-02-19 07:57:48] 2024-02-19 12:57:33,882 | INFO     | job summary report
[2024-02-19 07:57:48] 2024-02-19 12:57:33,882 | INFO     | --------------------------------------------------
[2024-02-19 07:57:48] 2024-02-19 12:57:33,882 | INFO     | PanDA job id: 6115752019
[2024-02-19 07:57:48] 2024-02-19 12:57:33,882 | INFO     | task id: NULL
[2024-02-19 07:57:48] 2024-02-19 12:57:33,882 | INFO     | errors: (none)
[2024-02-19 07:57:48] 2024-02-19 12:57:33,882 | INFO     | status: LOG_TRANSFER = DONE 
[2024-02-19 07:57:48] 2024-02-19 12:57:33,882 | INFO     | pilot state: finished 
[2024-02-19 07:57:48] 2024-02-19 12:57:33,882 | INFO     | transexitcode: 0
[2024-02-19 07:57:48] 2024-02-19 12:57:33,882 | INFO     | exeerrorcode: 0
[2024-02-19 07:57:48] 2024-02-19 12:57:33,882 | INFO     | exeerrordiag: 
[2024-02-19 07:57:48] 2024-02-19 12:57:33,882 | INFO     | exitcode: 0
[2024-02-19 07:57:48] 2024-02-19 12:57:33,882 | INFO     | exitmsg: OK
[2024-02-19 07:57:48] 2024-02-19 12:57:33,883 | INFO     | cpuconsumptiontime: 615 s
[2024-02-19 07:57:48] 2024-02-19 12:57:33,883 | INFO     | nevents: 2
[2024-02-19 07:57:48] 2024-02-19 12:57:33,883 | INFO     | neventsw: 0
[2024-02-19 07:57:48] 2024-02-19 12:57:33,883 | INFO     | pid: 239001
[2024-02-19 07:57:48] 2024-02-19 12:57:33,883 | INFO     | pgrp: 239001
[2024-02-19 07:57:48] 2024-02-19 12:57:33,883 | INFO     | corecount: 4
[2024-02-19 07:57:48] 2024-02-19 12:57:33,883 | INFO     | event service: False
[2024-02-19 07:57:48] 2024-02-19 12:57:33,883 | INFO     | sizes: {0: 2400245, 3: 2400451, 11: 2400479, 912: 2422230, 914: 2431294, 916: 2431350, 921: 2431700}
[2024-02-19 07:57:48] 2024-02-19 12:57:33,883 | INFO     | --------------------------------------------------
[2024-02-19 07:57:48] 2024-02-19 12:57:33,883 | INFO     | 
[2024-02-19 07:57:48] 2024-02-19 12:57:33,883 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2024-02-19 07:57:48] 2024-02-19 12:57:33,901 | INFO     | queue jobs had 0 job(s) [purged]
[2024-02-19 07:57:48] 2024-02-19 12:57:33,901 | INFO     | queue payloads had 0 job(s) [purged]
[2024-02-19 07:57:48] 2024-02-19 12:57:33,902 | INFO     | queue data_in had 0 job(s) [purged]
[2024-02-19 07:57:48] 2024-02-19 12:57:33,902 | INFO     | queue data_out had 0 job(s) [purged]
[2024-02-19 07:57:48] 2024-02-19 12:57:33,902 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-02-19 07:57:48] 2024-02-19 12:57:33,902 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-02-19 07:57:48] 2024-02-19 12:57:33,902 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-02-19 07:57:48] 2024-02-19 12:57:33,902 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-02-19 07:57:48] 2024-02-19 12:57:33,902 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-02-19 07:57:48] 2024-02-19 12:57:33,902 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-02-19 07:57:48] 2024-02-19 12:57:33,902 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-02-19 07:57:48] 2024-02-19 12:57:33,902 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-02-19 07:57:48] 2024-02-19 12:57:33,902 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-02-19 07:57:48] 2024-02-19 12:57:33,902 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-02-19 07:57:48] 2024-02-19 12:57:33,902 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-02-19 07:57:48] 2024-02-19 12:57:33,902 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-02-19 07:57:48] 2024-02-19 12:57:33,902 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-02-19 07:57:48] 2024-02-19 12:57:33,903 | INFO     | queue completed_jobids has 1 job(s)
[2024-02-19 07:57:48] 2024-02-19 12:57:33,903 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-02-19 07:57:48] 2024-02-19 12:57:33,903 | INFO     | queue messages had 0 job(s) [purged]
[2024-02-19 07:57:48] 2024-02-19 12:57:33,903 | INFO     | job 6115752019 has completed (purged errors)
[2024-02-19 07:57:48] 2024-02-19 12:57:33,903 | INFO     | overall cleanup function is called
[2024-02-19 07:57:48] 2024-02-19 12:57:34,909 | INFO     | --- collectZombieJob: --- 10, [239001]
[2024-02-19 07:57:48] 2024-02-19 12:57:34,910 | INFO     | zombie collector waiting for pid 239001
[2024-02-19 07:57:48] 2024-02-19 12:57:34,910 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-02-19 07:57:48] 2024-02-19 12:57:35,913 | INFO     | collected zombie processes
[2024-02-19 07:57:48] 2024-02-19 12:57:35,914 | INFO     | will now attempt to kill all subprocesses of pid=239001
[2024-02-19 07:57:48] 2024-02-19 12:57:35,993 | INFO     | process IDs to be killed: [239001] (in reverse order)
[2024-02-19 07:57:48] 2024-02-19 12:57:36,050 | WARNING  | found no corresponding commands to process id(s)
[2024-02-19 07:57:48] 2024-02-19 12:57:36,050 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-02-19 07:57:48] 2024-02-19 12:57:36,054 | INFO     | did not find any defunct processes belonging to 239001
[2024-02-19 07:57:48] 2024-02-19 12:57:36,057 | INFO     | did not find any defunct processes belonging to 239001
[2024-02-19 07:57:48] 2024-02-19 12:57:36,057 | INFO     | ready for new job
[2024-02-19 07:57:48] 2024-02-19 12:57:36,057 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-02-19 07:57:48] 2024-02-19 12:57:36,058 | INFO     | **************************************
[2024-02-19 07:57:48] 2024-02-19 12:57:36,058 | INFO     | ***  PanDA Pilot version 3.7.1.50  ***
[2024-02-19 07:57:48] 2024-02-19 12:57:36,058 | INFO     | **************************************
[2024-02-19 07:57:48] 2024-02-19 12:57:36,058 | INFO     | 
[2024-02-19 07:57:48] 2024-02-19 12:57:36,059 | INFO     | architecture information:
[2024-02-19 07:57:48] 2024-02-19 12:57:36,060 | INFO     | executing command: cat /etc/os-release
[2024-02-19 07:57:48] 2024-02-19 12:57:36,074 | INFO     | cat /etc/os-release:
[2024-02-19 07:57:48] NAME="CentOS Linux"
[2024-02-19 07:57:48] VERSION="7 (Core)"
[2024-02-19 07:57:48] ID="centos"
[2024-02-19 07:57:48] ID_LIKE="rhel fedora"
[2024-02-19 07:57:48] VERSION_ID="7"
[2024-02-19 07:57:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-02-19 07:57:48] ANSI_COLOR="0;31"
[2024-02-19 07:57:48] CPE_NAME="cpe:/o:centos:centos:7"
[2024-02-19 07:57:48] HOME_URL="https://www.centos.org/"
[2024-02-19 07:57:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-02-19 07:57:48] 
[2024-02-19 07:57:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-02-19 07:57:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-02-19 07:57:48] REDHAT_SUPPORT_PRODUCT="centos"
[2024-02-19 07:57:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-02-19 07:57:48] 
[2024-02-19 07:57:48] 2024-02-19 12:57:36,074 | INFO     | **************************************
[2024-02-19 07:57:48] 2024-02-19 12:57:36,577 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2024-02-19 07:57:48] 2024-02-19 12:57:36,593 | INFO     | sufficient remaining disk space (1808928866304 B)
[2024-02-19 07:57:48] 2024-02-19 12:57:36,593 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-02-19 07:57:48] 2024-02-19 12:57:36,594 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-02-19 07:57:48] 2024-02-19 12:57:36,594 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-02-19 07:57:48] 2024-02-19 12:57:36,594 | INFO     | found 0 job(s) in 20 queues
[2024-02-19 07:57:48] 2024-02-19 12:57:36,594 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-02-19 07:57:48] 2024-02-19 12:57:36,594 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-02-19 07:57:48] 2024-02-19 12:57:36,594 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-02-19 07:57:48] 2024-02-19 12:57:36,594 | INFO     | aborting loop
[2024-02-19 07:57:48] 2024-02-19 12:57:37,024 | INFO     | all job control threads have been joined
[2024-02-19 07:57:48] 2024-02-19 12:57:37,036 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-02-19 07:57:48] 2024-02-19 12:57:37,201 | INFO     | all data control threads have been joined
[2024-02-19 07:57:48] 2024-02-19 12:57:37,598 | INFO     | [job] retrieve thread has finished
[2024-02-19 07:57:48] 2024-02-19 12:57:37,598 | INFO     | [job] job monitor thread has finished
[2024-02-19 07:57:48] 2024-02-19 12:57:37,653 | INFO     | all payload control threads have been joined
[2024-02-19 07:57:48] 2024-02-19 12:57:37,822 | INFO     | [payload] execute_payloads thread has finished
[2024-02-19 07:57:48] 2024-02-19 12:57:37,833 | INFO     | [job] validate thread has finished
[2024-02-19 07:57:48] 2024-02-19 12:57:37,882 | INFO     | [payload] run_realtimelog thread has finished
[2024-02-19 07:57:48] 2024-02-19 12:57:37,930 | INFO     | [job] create_data_payload thread has finished
[2024-02-19 07:57:48] 2024-02-19 12:57:38,025 | INFO     | [job] control thread has finished
[2024-02-19 07:57:48] 2024-02-19 12:57:38,041 | INFO     | [payload] validate_pre thread has finished
[2024-02-19 07:57:48] 2024-02-19 12:57:38,206 | INFO     | [data] control thread has finished
[2024-02-19 07:57:48] 2024-02-19 12:57:38,657 | INFO     | [payload] control thread has finished
[2024-02-19 07:57:48] 2024-02-19 12:57:38,689 | INFO     | [payload] validate_post thread has finished
[2024-02-19 07:57:48] 2024-02-19 12:57:38,749 | INFO     | [payload] failed_post thread has finished
[2024-02-19 07:57:48] 2024-02-19 12:57:38,889 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-02-19 07:57:48] 2024-02-19 12:57:39,042 | INFO     | [data] copytool_out thread has finished
[2024-02-19 07:57:48] 2024-02-19 12:57:39,065 | INFO     | [data] copytool_in thread has finished
[2024-02-19 07:57:48] 2024-02-19 12:57:39,349 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-02-19 07:57:48] 2024-02-19 12:57:39,893 | INFO     | [job] queue monitor thread has finished
[2024-02-19 07:57:48] 2024-02-19 12:57:43,353 | INFO     | [data] queue_monitor thread has finished
[2024-02-19 07:57:48] 2024-02-19 12:57:43,529 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139684118112064)>', '<ExcThread(monitor, started 139683459749632)>']
[2024-02-19 07:57:48] 2024-02-19 12:57:43,621 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-02-19 07:57:48] 2024-02-19 12:57:43,622 | INFO     | [monitor] control thread has ended
[2024-02-19 07:57:48] 2024-02-19 12:57:48,553 | INFO     | all workflow threads have been joined
[2024-02-19 07:57:48] 2024-02-19 12:57:48,554 | INFO     | end of generic workflow (traces error code: 0)
[2024-02-19 07:57:48] 2024-02-19 12:57:48,554 | INFO     | traces error code: 0
[2024-02-19 07:57:48] 2024-02-19 12:57:48,554 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-02-19 07:57:48] 2024-02-19 12:57:48,614 [wrapper] ==== pilot stdout END ====
[2024-02-19 07:57:48] 2024-02-19 12:57:48,616 [wrapper] ==== wrapper stdout RESUME ====
[2024-02-19 07:57:48] 2024-02-19 12:57:48,618 [wrapper] pilotpid: 231710
[2024-02-19 07:57:48] 2024-02-19 12:57:48,620 [wrapper] Pilot exit status: 0
[2024-02-19 07:57:48] 2024-02-19 12:57:48,628 [wrapper] pandaids: 6115752019
[2024-02-19 07:57:48] 2024-02-19 12:57:48,661 [wrapper] cleanup: SIGTERM to supervisor_pilot  253984 231711
[2024-02-19 07:57:48] 2024-02-19 12:57:48,663 [wrapper] Test setup, not cleaning
[2024-02-19 07:57:48] 2024-02-19 12:57:48,665 [wrapper] ==== wrapper stdout END ====
[2024-02-19 07:57:48] 2024-02-19 12:57:48,667 [wrapper] ==== wrapper stderr END ====
[2024-02-19 07:57:48] 2024-02-19 12:57:48,672 [wrapper] apfmon messages muted
[2024-02-19 07:57:48]  *** Error codes and diagnostics ***
[2024-02-19 07:57:48]     "exeErrorCode": 0,
[2024-02-19 07:57:48]     "exeErrorDiag": "",
[2024-02-19 07:57:48]     "pilotErrorCode": 0,
[2024-02-19 07:57:48]     "pilotErrorDiag": "",
[2024-02-19 07:57:48]  *** Listing of results directory ***
[2024-02-19 07:57:48] total 46408
[2024-02-19 07:57:48] -rw-r--r-- 1 boinc boinc   460308 Feb 19 06:03 pilot3.tar.gz
[2024-02-19 07:57:48] -rwx------ 1 boinc boinc    31345 Feb 19 06:48 runpilot2-wrapper.sh
[2024-02-19 07:57:48] -rw-r--r-- 1 boinc boinc     4388 Feb 19 06:48 queuedata.json
[2024-02-19 07:57:48] -rw-r--r-- 1 boinc boinc      107 Feb 19 07:41 wrapper_26015_x86_64-pc-linux-gnu
[2024-02-19 07:57:48] -rwxr-xr-x 1 boinc boinc     7986 Feb 19 07:41 run_atlas
[2024-02-19 07:57:48] -rw-r--r-- 1 boinc boinc      112 Feb 19 07:41 job.xml
[2024-02-19 07:57:48] -rw-r--r-- 2 boinc boinc    17618 Feb 19 07:41 start_atlas.sh
[2024-02-19 07:57:48] drwxrwx--x 2 boinc boinc     4096 Feb 19 07:41 shared
[2024-02-19 07:57:48] -rw-r--r-- 2 boinc boinc   471854 Feb 19 07:41 input.tar.gz
[2024-02-19 07:57:48] -rw-r--r-- 1 boinc boinc     9502 Feb 19 07:41 init_data.xml
[2024-02-19 07:57:48] -rw-r--r-- 2 boinc boinc 37595586 Feb 19 07:41 EVNT.04972714._000034.pool.root.1
[2024-02-19 07:57:48] -rw-r--r-- 1 boinc boinc        0 Feb 19 07:41 boinc_lockfile
[2024-02-19 07:57:48] -rw-r--r-- 1 boinc boinc     2758 Feb 19 07:41 pandaJob.out
[2024-02-19 07:57:48] -rw------- 1 boinc boinc      424 Feb 19 07:41 setup.sh.local
[2024-02-19 07:57:48] -rw------- 1 boinc boinc   961853 Feb 19 07:41 agis_schedconf.cvmfs.json
[2024-02-19 07:57:48] -rw------- 1 boinc boinc        0 Feb 19 07:41 agis_ddmendpoints.agis.ALL.json
[2024-02-19 07:57:48] -rw------- 1 boinc boinc  1337301 Feb 19 07:41 cric_ddmendpoints.json
[2024-02-19 07:57:48] drwx------ 4 boinc boinc     4096 Feb 19 07:41 pilot3
[2024-02-19 07:57:48] -rw------- 1 boinc boinc       95 Feb 19 07:56 pilot_heartbeat.json
[2024-02-19 07:57:48] -rw-r--r-- 1 boinc boinc      533 Feb 19 07:57 boinc_task_state.xml
[2024-02-19 07:57:48] -rw------- 1 boinc boinc  2930642 Feb 19 07:57 output.1.8d1036df-afa4-4ccb-a1ba-d48d9935da41_68468.pool.root
[2024-02-19 07:57:48] -rw------- 1 boinc boinc     1001 Feb 19 07:57 memory_monitor_summary.json
[2024-02-19 07:57:48] -rw------- 1 boinc boinc   155306 Feb 19 07:57 8d1036df-afa4-4ccb-a1ba-d48d9935da41_68468.1.job.log.tgz
[2024-02-19 07:57:48] -rw------- 1 boinc boinc     7762 Feb 19 07:57 heartbeat.json
[2024-02-19 07:57:48] -rw-r--r-- 1 boinc boinc     8192 Feb 19 07:57 boinc_mmap_file
[2024-02-19 07:57:48] -rw-r--r-- 1 boinc boinc       24 Feb 19 07:57 wrapper_checkpoint.txt
[2024-02-19 07:57:48] -rw------- 1 boinc boinc     4347 Feb 19 07:57 pilotlog.txt
[2024-02-19 07:57:48] -rw------- 1 boinc boinc   141887 Feb 19 07:57 8d1036df-afa4-4ccb-a1ba-d48d9935da41_68468.1.job.log
[2024-02-19 07:57:48] -rw------- 1 boinc boinc      464 Feb 19 07:57 output.list
[2024-02-19 07:57:48] -rw-r--r-- 1 boinc boinc      748 Feb 19 07:57 runtime_log
[2024-02-19 07:57:48] -rw------- 1 boinc boinc  3246080 Feb 19 07:57 result.tar.gz
[2024-02-19 07:57:48] -rw------- 1 boinc boinc      617 Feb 19 07:57 U1uLDmZJHw4n7Olcko1bjSoqABFKDmABFKDmyeZQDmG0KKDmrn7kPm.diag
[2024-02-19 07:57:48] -rw-r--r-- 1 boinc boinc    12080 Feb 19 07:57 runtime_log.err
[2024-02-19 07:57:48] -rw-r--r-- 1 boinc boinc    20966 Feb 19 07:57 stderr.txt
[2024-02-19 07:57:48] HITS file was successfully produced:
[2024-02-19 07:57:48] -rw------- 1 boinc boinc 2930642 Feb 19 07:57 shared/HITS.pool.root.1
[2024-02-19 07:57:48]  *** Contents of shared directory: ***
[2024-02-19 07:57:48] total 43240
[2024-02-19 07:57:48] -rw-r--r-- 2 boinc boinc    17618 Feb 19 07:41 start_atlas.sh
[2024-02-19 07:57:48] -rw-r--r-- 2 boinc boinc   471854 Feb 19 07:41 input.tar.gz
[2024-02-19 07:57:48] -rw-r--r-- 2 boinc boinc 37595586 Feb 19 07:41 ATLAS.root_0
[2024-02-19 07:57:48] -rw------- 1 boinc boinc  2930642 Feb 19 07:57 HITS.pool.root.1
[2024-02-19 07:57:48] -rw------- 1 boinc boinc  3246080 Feb 19 07:57 result.tar.gz
07:57:49 (227917): run_atlas exited; CPU time 606.974562
07:57:49 (227917): called boinc_finish(0)

</stderr_txt>
]]>

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