Name 4k6KDmJZnx4n7Olcko1bjSoqABFKDmABFKDmyeZQDmo7KKDmws4Own_0
Workunit 2389703
Created 23 Feb 2024, 16:27:19 UTC
Sent 23 Feb 2024, 16:51:47 UTC
Report deadline 1 Mar 2024, 16:51:47 UTC
Received 23 Feb 2024, 17:55:24 UTC
Server state Over
Outcome Validate error
Client state Done
Exit status 0 (0x00000000)
Computer ID 4911
Run time 12 min 42 sec
CPU time 5 min 25 sec
Validate state Invalid
Credit 0.00
Device peak FLOPS 32.01 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.51 GB
Peak swap size 2.12 GB
Peak disk usage 80.11 MB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
11:56:32 (3024985): wrapper (7.7.26015): starting
11:56:32 (3024985): wrapper: running run_atlas (--nthreads 4)
[2024-02-23 11:56:32] Arguments: --nthreads 4
[2024-02-23 11:56:32] Threads: 4
[2024-02-23 11:56:32] Checking for CVMFS
[2024-02-23 11:56:32] Probing /cvmfs/atlas.cern.ch... OK
[2024-02-23 11:56:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-02-23 11:56:34] Running cvmfs_config stat atlas.cern.ch
[2024-02-23 11:56:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-02-23 11:56:34] 2.9.2.0 3006006 11 39380 129748 0 75 2666682 4194305 705 130560 0 55047 99.974 35973 3135 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2024-02-23 11:56:34] CVMFS is ok
[2024-02-23 11:56:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-02-23 11:56:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-02-23 11:56:34] Small home clusters do not require a local http proxy but it is suggested if
[2024-02-23 11:56:34] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-02-23 11:56:34] Further information can be found at the LHC@home message board.
[2024-02-23 11:56:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-02-23 11:56:34] Checking for apptainer binary...
[2024-02-23 11:56:34] apptainer is not installed, using version from CVMFS
[2024-02-23 11:56:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-02-23 11:56:35] WC5950
[2024-02-23 11:56:35] apptainer works
[2024-02-23 11:56:35] Set ATHENA_PROC_NUMBER=4
[2024-02-23 11:56:35] Set ATHENA_CORE_NUMBER=4
[2024-02-23 11:56:35] Starting ATLAS job with PandaID=6122637528
[2024-02-23 11:56:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/21 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-02-23 12:09:12]  *** The last 200 lines of the pilot log: ***
[2024-02-23 12:09:12] 2024-02-23 17:08:57,220 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2024-02-23 12:09:12] 2024-02-23 17:08:57,220 | DEBUG    | pilot.control.job                | add_timing_and_extracts   | could have reported time_log_creation=0 s
[2024-02-23 12:09:12] 2024-02-23 17:08:57,220 | DEBUG    | pilot.control.job                | send_state                | data={'jobId': '6122637528', 'state': 'finished', 'timestamp': '2024-02-23T12:08:51-05:00', 'siteNam
[2024-02-23 12:09:12] 2024-02-23 17:08:57,220 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | heartbeat dictionary: {'jobId': '6122637528', 'state': 'finished', 'timestamp': '2024-02-23T12:08:51
[2024-02-23 12:09:12] 2024-02-23 17:08:57,220 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file: /var/lib/boinc-client/slots/21/heartbeat.json
[2024-02-23 12:09:12] 2024-02-23 17:08:57,220 | DEBUG    | pilot.control.job                | queue_monitor             | job.completed=False
[2024-02-23 12:09:12] 2024-02-23 17:08:57,267 | INFO     | pilot.control.job                | make_job_report           | 
[2024-02-23 12:09:12] 2024-02-23 17:08:57,267 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2024-02-23 12:09:12] 2024-02-23 17:08:57,267 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2024-02-23 12:09:12] 2024-02-23 17:08:57,270 | WARNING  | pilot.util.monitoring            | job_monitor_tasks         | process 3036318 is no longer using CPU - aborting
[2024-02-23 12:09:12] 2024-02-23 17:08:57,270 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 6122637528
[2024-02-23 12:09:12] 2024-02-23 17:08:57,270 | DEBUG    | pilot.control.job                | job_monitor               | job_monitor_tasks returned 0, 
[2024-02-23 12:09:12] 2024-02-23 17:08:57,270 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2024-02-23 12:09:12] 2024-02-23 17:08:57,270 | INFO     | pilot.control.job                | job_monitor               | aborting job monitoring since job object (job id=6122637528) has expired
[2024-02-23 12:09:12] 2024-02-23 17:08:57,270 | INFO     | pilot.control.job                | make_job_report           | errors: (none)
[2024-02-23 12:09:12] 2024-02-23 17:08:57,270 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2024-02-23 12:09:12] 2024-02-23 17:08:57,270 | INFO     | pilot.control.job                | make_job_report           | pilot state: finished 
[2024-02-23 12:09:12] 2024-02-23 17:08:57,270 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 0
[2024-02-23 12:09:12] 2024-02-23 17:08:57,270 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2024-02-23 12:09:12] 2024-02-23 17:08:57,270 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2024-02-23 12:09:12] 2024-02-23 17:08:57,270 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2024-02-23 12:09:12] 2024-02-23 17:08:57,270 | INFO     | pilot.control.job                | make_job_report           | exitmsg: OK
[2024-02-23 12:09:12] 2024-02-23 17:08:57,270 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 329 s
[2024-02-23 12:09:12] 2024-02-23 17:08:57,271 | INFO     | pilot.control.job                | make_job_report           | nevents: 2
[2024-02-23 12:09:12] 2024-02-23 17:08:57,271 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2024-02-23 12:09:12] 2024-02-23 17:08:57,271 | INFO     | pilot.control.job                | make_job_report           | pid: 3036318
[2024-02-23 12:09:12] 2024-02-23 17:08:57,271 | INFO     | pilot.control.job                | make_job_report           | pgrp: 3036318
[2024-02-23 12:09:12] 2024-02-23 17:08:57,271 | INFO     | pilot.control.job                | make_job_report           | corecount: 4
[2024-02-23 12:09:12] 2024-02-23 17:08:57,271 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2024-02-23 12:09:12] 2024-02-23 17:08:57,271 | INFO     | pilot.control.job                | make_job_report           | sizes: {0: 2392766, 3: 2392972, 11: 2393000, 709: 2412630, 710: 2421696, 713: 2421752, 719: 2422102}
[2024-02-23 12:09:12] 2024-02-23 17:08:57,271 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2024-02-23 12:09:12] 2024-02-23 17:08:57,271 | INFO     | pilot.control.job                | make_job_report           | 
[2024-02-23 12:09:12] 2024-02-23 17:08:57,271 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /var/lib/boinc-client/slots/21:
[2024-02-23 12:09:12] 
[2024-02-23 12:09:12] 2024-02-23 17:08:57,271 | INFO     | pilot.util.container             | print_executable          | executing command: ls -lF /var/lib/boinc-client/slots/21
[2024-02-23 12:09:12] 2024-02-23 17:08:57,276 | DEBUG    | pilot.util.container             | execute                   | subprocess.communicate() will use timeout 864000 s
[2024-02-23 12:09:12] 2024-02-23 17:08:57,285 | DEBUG    | pilot.control.job                | has_job_completed         | total 43004
[2024-02-23 12:09:12] -rw------- 1 boinc boinc   365344 Feb 23 12:08 24bf383f-956b-4020-9b04-501836b72a1a_10715.1.job.log
[2024-02-23 12:09:12] -rw------- 1 boinc boinc   168187 Feb 23 12:08 24bf383f-956b-4020-9b04-501836b72a1a_10715.1.job.log.tgz
[2024-02-23 12:09:12] -rw------- 1 boinc boinc      129 Feb 23 11:56 4k6KDmJZnx4n7Olcko1bjSoqABFKDmABFKDmyeZQDmo7KKDmws4Own.diag
[2024-02-23 12:09:12] -rw------- 1 boinc boinc        0 Feb 23 11:56 agis_ddmendpoints.agis.ALL.json
[2024-02-23 12:09:12] -rw------- 1 boinc boinc   969022 Feb 23 11:56 agis_schedconf.cvmfs.json
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc        0 Feb 23 11:56 boinc_lockfile
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc     8192 Feb 23 12:08 boinc_mmap_file
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc      532 Feb 23 12:08 boinc_task_state.xml
[2024-02-23 12:09:12] -rw------- 1 boinc boinc  1333972 Feb 23 11:56 cric_ddmendpoints.json
[2024-02-23 12:09:12] -rw-r--r-- 2 boinc boinc 38184411 Feb 23 11:56 EVNT.04972714._000028.pool.root.1
[2024-02-23 12:09:12] -rw------- 1 boinc boinc     6542 Feb 23 12:08 heartbeat.json
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc     9363 Feb 23 11:56 init_data.xml
[2024-02-23 12:09:12] -rw-r--r-- 2 boinc boinc   502021 Feb 23 11:56 input.tar.gz
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc      112 Feb 23 11:56 job.xml
[2024-02-23 12:09:12] -rw------- 1 boinc boinc     1004 Feb 23 12:08 memory_monitor_summary.json
[2024-02-23 12:09:12] -rw------- 1 boinc boinc  1495908 Feb 23 12:08 output.1.24bf383f-956b-4020-9b04-501836b72a1a_10715.pool.root
[2024-02-23 12:09:12] -rw------- 1 boinc boinc      464 Feb 23 12:08 output.list
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc     2663 Feb 23 11:56 pandaJob.out
[2024-02-23 12:09:12] drwxrwx--- 2 boinc boinc     4096 Feb 23 12:08 PanDA_Pilot-6122637528/
[2024-02-23 12:09:12] drwx------ 5 boinc boinc     4096 Feb 23 11:56 pilot3/
[2024-02-23 12:09:12] -rw------- 1 boinc boinc   489841 Feb 23 11:27 pilot3.tar.gz
[2024-02-23 12:09:12] -rw------- 1 boinc boinc       95 Feb 23 12:08 pilot_heartbeat.json
[2024-02-23 12:09:12] -rw------- 1 boinc boinc   336133 Feb 23 12:08 pilotlog.txt
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc     4388 Feb 23 11:27 queuedata.json
[2024-02-23 12:09:12] -rwxr-xr-x 1 boinc boinc     7986 Feb 23 11:56 run_atlas*
[2024-02-23 12:09:12] -rwx------ 1 boinc boinc    32498 Feb 23 11:27 runpilot2-wrapper.sh*
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc      407 Feb 23 11:56 runtime_log
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc     7857 Feb 23 11:56 runtime_log.err
[2024-02-23 12:09:12] -rw------- 1 boinc boinc      424 Feb 23 11:56 setup.sh.local
[2024-02-23 12:09:12] drwxrwx--x 2 boinc boinc     4096 Feb 23 11:56 shared/
[2024-02-23 12:09:12] -rw-r--r-- 2 boinc boinc    17646 Feb 23 11:56 start_atlas.sh
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc     2263 Feb 23 11:56 stderr.txt
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc      107 Feb 23 11:56 wrapper_26015_x86_64-pc-linux-gnu
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc       24 Feb 23 12:08 wrapper_checkpoint.txt
[2024-02-23 12:09:12] 2024-02-23 17:08:57,285 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs had 0 job(s) [purged]
[2024-02-23 12:09:12] 2024-02-23 17:08:57,285 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads had 0 job(s) [purged]
[2024-02-23 12:09:12] 2024-02-23 17:08:57,285 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in had 0 job(s) [purged]
[2024-02-23 12:09:12] 2024-02-23 17:08:57,285 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out had 0 job(s) [purged]
[2024-02-23 12:09:12] 2024-02-23 17:08:57,285 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in had 0 job(s) [purged]
[2024-02-23 12:09:12] 2024-02-23 17:08:57,285 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs had 0 job(s) [purged]
[2024-02-23 12:09:12] 2024-02-23 17:08:57,285 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads had 0 job(s) [purged]
[2024-02-23 12:09:12] 2024-02-23 17:08:57,285 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads had 0 job(s) [purged]
[2024-02-23 12:09:12] 2024-02-23 17:08:57,285 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs had 0 job(s) [purged]
[2024-02-23 12:09:12] 2024-02-23 17:08:57,285 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads had 0 job(s) [purged]
[2024-02-23 12:09:12] 2024-02-23 17:08:57,285 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in had 1 job(s) [purged]
[2024-02-23 12:09:12] 2024-02-23 17:08:57,285 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out had 0 job(s) [purged]
[2024-02-23 12:09:12] 2024-02-23 17:08:57,285 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs had 0 job(s) [purged]
[2024-02-23 12:09:12] 2024-02-23 17:08:57,285 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads had 0 job(s) [purged]
[2024-02-23 12:09:12] 2024-02-23 17:08:57,285 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in had 0 job(s) [purged]
[2024-02-23 12:09:12] 2024-02-23 17:08:57,286 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out had 0 job(s) [purged]
[2024-02-23 12:09:12] 2024-02-23 17:08:57,286 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs had 0 job(s) [purged]
[2024-02-23 12:09:12] 2024-02-23 17:08:57,286 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2024-02-23 12:09:12] 2024-02-23 17:08:57,286 | INFO     | pilot.util.queuehandling         | queue_report              | queue realtimelog_payloads had 0 job(s) [purged]
[2024-02-23 12:09:12] 2024-02-23 17:08:57,286 | INFO     | pilot.util.queuehandling         | queue_report              | queue messages had 0 job(s) [purged]
[2024-02-23 12:09:12] 2024-02-23 17:08:57,286 | INFO     | pilot.control.job                | has_job_completed         | job 6122637528 has completed (purged errors)
[2024-02-23 12:09:12] 2024-02-23 17:08:57,286 | DEBUG    | pilot.util.realtimelogger        | cleanup                   | attempting real-time logger cleanup
[2024-02-23 12:09:12] 2024-02-23 17:08:57,286 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2024-02-23 12:09:12] 2024-02-23 17:08:57,287 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /var/lib/boinc-client/slots/21/PanDA_Pilot-6122637528
[2024-02-23 12:09:12] 2024-02-23 17:08:58,292 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [3036318]
[2024-02-23 12:09:12] 2024-02-23 17:08:58,293 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector waiting for pid 3036318
[2024-02-23 12:09:12] 2024-02-23 17:08:58,293 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-02-23 12:09:12] 2024-02-23 17:08:59,298 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2024-02-23 12:09:12] 2024-02-23 17:08:59,298 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=3036318
[2024-02-23 12:09:12] 2024-02-23 17:08:59,303 | DEBUG    | pilot.util.container             | execute                   | subprocess.communicate() will use timeout 864000 s
[2024-02-23 12:09:12] 2024-02-23 17:08:59,350 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [3036318] (in reverse order)
[2024-02-23 12:09:12] 2024-02-23 17:08:59,355 | DEBUG    | pilot.util.container             | execute                   | subprocess.communicate() will use timeout 864000 s
[2024-02-23 12:09:12] 2024-02-23 17:08:59,387 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2024-02-23 12:09:12] 2024-02-23 17:08:59,387 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2024-02-23 12:09:12] 2024-02-23 17:08:59,391 | INFO     | pilot.util.processes             | kill_defunct_children     | did not find any defunct processes belonging to 3036318
[2024-02-23 12:09:12] 2024-02-23 17:08:59,394 | INFO     | pilot.util.processes             | kill_defunct_children     | did not find any defunct processes belonging to 3036318
[2024-02-23 12:09:12] 2024-02-23 17:08:59,394 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2024-02-23 12:09:12] 2024-02-23 17:08:59,394 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2024-02-23 12:09:12] 2024-02-23 17:08:59,394 | INFO     | root                             | retrieve                  | pilot has finished with previous job - re-establishing logging
[2024-02-23 12:09:12] 2024-02-23 17:08:59,395 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *************************************
[2024-02-23 12:09:12] 2024-02-23 17:08:59,395 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 3.7.2.1  ***
[2024-02-23 12:09:12] 2024-02-23 17:08:59,395 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *************************************
[2024-02-23 12:09:12] 2024-02-23 17:08:59,395 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2024-02-23 12:09:12] 2024-02-23 17:08:59,413 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2024-02-23 12:09:12] 2024-02-23 17:08:59,413 | INFO     | pilot.util.container             | print_executable          | executing command: cat /etc/os-release
[2024-02-23 12:09:12] 2024-02-23 17:08:59,421 | DEBUG    | pilot.util.container             | execute                   | subprocess.communicate() will use timeout 864000 s
[2024-02-23 12:09:12] 2024-02-23 17:08:59,427 | INFO     | pilot.util.filehandling          | dump                      | cat /etc/os-release:
[2024-02-23 12:09:12] NAME="CentOS Linux"
[2024-02-23 12:09:12] VERSION="7 (Core)"
[2024-02-23 12:09:12] ID="centos"
[2024-02-23 12:09:12] ID_LIKE="rhel fedora"
[2024-02-23 12:09:12] VERSION_ID="7"
[2024-02-23 12:09:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-02-23 12:09:12] ANSI_COLOR="0;31"
[2024-02-23 12:09:12] CPE_NAME="cpe:/o:centos:centos:7"
[2024-02-23 12:09:12] HOME_URL="https://www.centos.org/"
[2024-02-23 12:09:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-02-23 12:09:12] 
[2024-02-23 12:09:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-02-23 12:09:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-02-23 12:09:12] REDHAT_SUPPORT_PRODUCT="centos"
[2024-02-23 12:09:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-02-23 12:09:12] 
[2024-02-23 12:09:12] 2024-02-23 17:08:59,427 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *************************************
[2024-02-23 12:09:12] 2024-02-23 17:08:59,930 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /var/lib/boinc-client/slots/21
[2024-02-23 12:09:12] 2024-02-23 17:08:59,930 | INFO     | pilot.util.container             | print_executable          | executing command: df -mP /var/lib/boinc-client/slots/21
[2024-02-23 12:09:12] 2024-02-23 17:08:59,936 | DEBUG    | pilot.util.container             | execute                   | subprocess.communicate() will use timeout 864000 s
[2024-02-23 12:09:12] 2024-02-23 17:08:59,943 | DEBUG    | pilot.util.workernode            | get_local_disk_space      | stdout=Filesystem     1048576-blocks  Used Available Capacity Mounted on
[2024-02-23 12:09:12] /dev/nvme0n1p2         467851 86817    357198      20% /var/lib/boinc-client/slots/21
[2024-02-23 12:09:12] 2024-02-23 17:08:59,943 | DEBUG    | pilot.util.workernode            | get_local_disk_space      | stderr=
[2024-02-23 12:09:12] 2024-02-23 17:08:59,943 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (374549250048 B)
[2024-02-23 12:09:12] 2024-02-23 17:08:59,943 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2024-02-23 12:09:12] 2024-02-23 17:08:59,943 | WARNING  | pilot.control.job                | retrieve                  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-02-23 12:09:12] 2024-02-23 17:08:59,943 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2024-02-23 12:09:12] 2024-02-23 17:09:00,178 | INFO     | pilot.control.payload            | control                   | all payload control threads have been joined
[2024-02-23 12:09:12] 2024-02-23 17:09:00,178 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2024-02-23 12:09:12] 2024-02-23 17:09:00,547 | INFO     | pilot.control.data               | control                   | all data control threads have been joined
[2024-02-23 12:09:12] 2024-02-23 17:09:00,547 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2024-02-23 12:09:12] 2024-02-23 17:09:00,675 | INFO     | pilot.util.queuehandling         | abort_jobs_in_queues      | found 0 job(s) in 20 queues
[2024-02-23 12:09:12] 2024-02-23 17:09:00,675 | WARNING  | pilot.control.monitor            | run_checks                | pilot monitor received instruction that args.graceful_stop has been set
[2024-02-23 12:09:12] 2024-02-23 17:09:00,675 | WARNING  | pilot.control.monitor            | run_checks                | will wait for a maximum of 300 s for threads to finish
[2024-02-23 12:09:12] 2024-02-23 17:09:00,778 | WARNING  | pilot.util.common                | should_abort              | job:job_monitor:received graceful stop - abort after this iteration
[2024-02-23 12:09:12] 2024-02-23 17:09:00,778 | INFO     | pilot.control.job                | job_monitor               | aborting loop
[2024-02-23 12:09:12] 2024-02-23 17:09:00,948 | INFO     | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2024-02-23 12:09:12] 2024-02-23 17:09:01,183 | INFO     | pilot.control.payload            | control                   | [payload] control thread has finished
[2024-02-23 12:09:12] 2024-02-23 17:09:01,228 | INFO     | pilot.control.job                | control                   | all job control threads have been joined
[2024-02-23 12:09:12] 2024-02-23 17:09:01,229 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2024-02-23 12:09:12] 2024-02-23 17:09:01,351 | INFO     | pilot.control.payload            | run_realtimelog           | [payload] run_realtimelog thread has finished
[2024-02-23 12:09:12] 2024-02-23 17:09:01,553 | INFO     | pilot.control.data               | control                   | [data] control thread has finished
[2024-02-23 12:09:12] 2024-02-23 17:09:01,561 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2024-02-23 12:09:12] 2024-02-23 17:09:01,783 | INFO     | pilot.control.job                | job_monitor               | [job] job monitor thread has finished
[2024-02-23 12:09:12] 2024-02-23 17:09:01,911 | INFO     | pilot.control.job                | validate                  | [job] validate thread has finished
[2024-02-23 12:09:12] 2024-02-23 17:09:01,949 | INFO     | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2024-02-23 12:09:12] 2024-02-23 17:09:01,957 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-02-23 12:09:12] 2024-02-23 17:09:02,050 | INFO     | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2024-02-23 12:09:12] 2024-02-23 17:09:02,093 | INFO     | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2024-02-23 12:09:12] 2024-02-23 17:09:02,101 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2024-02-23 12:09:12] 2024-02-23 17:09:02,214 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2024-02-23 12:09:12] 2024-02-23 17:09:02,234 | INFO     | pilot.control.job                | control                   | [job] control thread has finished
[2024-02-23 12:09:12] 2024-02-23 17:09:02,277 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2024-02-23 12:09:12] 2024-02-23 17:09:02,353 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2024-02-23 12:09:12] 2024-02-23 17:09:03,282 | INFO     | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2024-02-23 12:09:12] 2024-02-23 17:09:05,962 | INFO     | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2024-02-23 12:09:12] 2024-02-23 17:09:06,878 | INFO     | pilot.util.processes             | threads_aborted           | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139671
[2024-02-23 12:09:12] 2024-02-23 17:09:06,879 | DEBUG    | pilot.workflow.generic           | run                       | will proceed to set job_aborted
[2024-02-23 12:09:12] 2024-02-23 17:09:07,705 | WARNING  | pilot.control.monitor            | run_checks                | job_aborted has been set - aborting pilot monitoring
[2024-02-23 12:09:12] 2024-02-23 17:09:07,705 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2024-02-23 12:09:12] 2024-02-23 17:09:11,904 | DEBUG    | pilot.workflow.generic           | run                       | all relevant threads have aborted (thread count=1)
[2024-02-23 12:09:12] 2024-02-23 17:09:11,904 | INFO     | pilot.workflow.generic           | run                       | all workflow threads have been joined
[2024-02-23 12:09:12] 2024-02-23 17:09:11,904 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2024-02-23 12:09:12] 2024-02-23 17:09:11,937 | DEBUG    | pilot.util.processgroups         | get_all_child_pids        | python3(3029072)---pstree(3049073)
[2024-02-23 12:09:12] 
[2024-02-23 12:09:12] 2024-02-23 17:09:11,938 | INFO     | pilot.util.processgroups         | find_defunct_subprocesses | child pids=[3029072, 3049073]
[2024-02-23 12:09:12] 2024-02-23 17:09:11,959 | DEBUG    | pilot.util.processgroups         | is_defunct                | 3029072: return code=0, stdout=SN
[2024-02-23 12:09:12] , stderr=
[2024-02-23 12:09:12] 2024-02-23 17:09:11,979 | DEBUG    | pilot.util.processgroups         | is_defunct                | 3049073: return code=1, stdout=, stderr=
[2024-02-23 12:09:12] 2024-02-23 17:09:11,980 | INFO     | root                             | list_zombies              | no defunct processes were found
[2024-02-23 12:09:12] 2024-02-23 17:09:11,980 | INFO     | root                             | get_proper_exit_code      | traces error code: 0
[2024-02-23 12:09:12] 2024-02-23 17:09:11,980 | INFO     | root                             | wrap_up                   | pilot has finished (exit code=0, shell exit code=0)
[2024-02-23 12:09:12] 2024-02-23 17:09:12,028 [wrapper] ==== pilot stdout END ====
[2024-02-23 12:09:12] 2024-02-23 17:09:12,034 [wrapper] ==== wrapper stdout RESUME ====
[2024-02-23 12:09:12] 2024-02-23 17:09:12,036 [wrapper] pilotpid: 3029072
[2024-02-23 12:09:12] 2024-02-23 17:09:12,038 [wrapper] Pilot exit status: 0
[2024-02-23 12:09:12] 2024-02-23 17:09:12,048 [wrapper] pandaids: 6122637528
[2024-02-23 12:09:12] 2024-02-23 17:09:12,065 [wrapper] cleanup: SIGTERM to supervisor_pilot 3029077 3029073
[2024-02-23 12:09:12] 2024-02-23 17:09:12,067 [wrapper] Test setup, not cleaning
[2024-02-23 12:09:12] 2024-02-23 17:09:12,069 [wrapper] ==== wrapper stdout END ====
[2024-02-23 12:09:12] 2024-02-23 17:09:12,070 [wrapper] ==== wrapper stderr END ====
[2024-02-23 12:09:12] 2024-02-23 17:09:12,074 [wrapper] apfmon messages muted
[2024-02-23 12:09:12]  *** Error codes and diagnostics ***
[2024-02-23 12:09:12]     "exeErrorCode": 0,
[2024-02-23 12:09:12]     "exeErrorDiag": "",
[2024-02-23 12:09:12]     "pilotErrorCode": 0,
[2024-02-23 12:09:12]     "pilotErrorDiag": "",
[2024-02-23 12:09:12]  *** Listing of results directory ***
[2024-02-23 12:09:12] total 44748
[2024-02-23 12:09:12] -rwx------ 1 boinc boinc    32498 Feb 23 11:27 runpilot2-wrapper.sh
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc     4388 Feb 23 11:27 queuedata.json
[2024-02-23 12:09:12] -rw------- 1 boinc boinc   489841 Feb 23 11:27 pilot3.tar.gz
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc      107 Feb 23 11:56 wrapper_26015_x86_64-pc-linux-gnu
[2024-02-23 12:09:12] -rwxr-xr-x 1 boinc boinc     7986 Feb 23 11:56 run_atlas
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc      112 Feb 23 11:56 job.xml
[2024-02-23 12:09:12] -rw-r--r-- 2 boinc boinc    17646 Feb 23 11:56 start_atlas.sh
[2024-02-23 12:09:12] drwxrwx--x 2 boinc boinc     4096 Feb 23 11:56 shared
[2024-02-23 12:09:12] -rw-r--r-- 2 boinc boinc   502021 Feb 23 11:56 input.tar.gz
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc     9363 Feb 23 11:56 init_data.xml
[2024-02-23 12:09:12] -rw-r--r-- 2 boinc boinc 38184411 Feb 23 11:56 EVNT.04972714._000028.pool.root.1
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc        0 Feb 23 11:56 boinc_lockfile
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc     2663 Feb 23 11:56 pandaJob.out
[2024-02-23 12:09:12] -rw------- 1 boinc boinc      424 Feb 23 11:56 setup.sh.local
[2024-02-23 12:09:12] -rw------- 1 boinc boinc   969022 Feb 23 11:56 agis_schedconf.cvmfs.json
[2024-02-23 12:09:12] -rw------- 1 boinc boinc        0 Feb 23 11:56 agis_ddmendpoints.agis.ALL.json
[2024-02-23 12:09:12] -rw------- 1 boinc boinc  1333972 Feb 23 11:56 cric_ddmendpoints.json
[2024-02-23 12:09:12] drwx------ 5 boinc boinc     4096 Feb 23 11:56 pilot3
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc      532 Feb 23 12:08 boinc_task_state.xml
[2024-02-23 12:09:12] -rw------- 1 boinc boinc  1495908 Feb 23 12:08 output.1.24bf383f-956b-4020-9b04-501836b72a1a_10715.pool.root
[2024-02-23 12:09:12] -rw------- 1 boinc boinc       95 Feb 23 12:08 pilot_heartbeat.json
[2024-02-23 12:09:12] -rw------- 1 boinc boinc     1004 Feb 23 12:08 memory_monitor_summary.json
[2024-02-23 12:09:12] -rw------- 1 boinc boinc   168187 Feb 23 12:08 24bf383f-956b-4020-9b04-501836b72a1a_10715.1.job.log.tgz
[2024-02-23 12:09:12] -rw------- 1 boinc boinc     6542 Feb 23 12:08 heartbeat.json
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc     8192 Feb 23 12:09 boinc_mmap_file
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc       24 Feb 23 12:09 wrapper_checkpoint.txt
[2024-02-23 12:09:12] -rw------- 1 boinc boinc     9369 Feb 23 12:09 pilotlog.txt
[2024-02-23 12:09:12] -rw------- 1 boinc boinc   383439 Feb 23 12:09 24bf383f-956b-4020-9b04-501836b72a1a_10715.1.job.log
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc      748 Feb 23 12:09 runtime_log
[2024-02-23 12:09:12] -rw------- 1 boinc boinc  2068480 Feb 23 12:09 result.tar.gz
[2024-02-23 12:09:12] -rw------- 1 boinc boinc      464 Feb 23 12:09 output.list
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc    12106 Feb 23 12:09 runtime_log.err
[2024-02-23 12:09:12] -rw------- 1 boinc boinc      623 Feb 23 12:09 4k6KDmJZnx4n7Olcko1bjSoqABFKDmABFKDmyeZQDmo7KKDmws4Own.diag
[2024-02-23 12:09:12] -rw-r--r-- 1 boinc boinc    29749 Feb 23 12:09 stderr.txt
[2024-02-23 12:09:12] HITS file was successfully produced:
[2024-02-23 12:09:12] -rw------- 1 boinc boinc 1495908 Feb 23 12:08 shared/HITS.pool.root.1
[2024-02-23 12:09:12]  *** Contents of shared directory: ***
[2024-02-23 12:09:12] total 41288
[2024-02-23 12:09:12] -rw-r--r-- 2 boinc boinc    17646 Feb 23 11:56 start_atlas.sh
[2024-02-23 12:09:12] -rw-r--r-- 2 boinc boinc   502021 Feb 23 11:56 input.tar.gz
[2024-02-23 12:09:12] -rw-r--r-- 2 boinc boinc 38184411 Feb 23 11:56 ATLAS.root_0
[2024-02-23 12:09:12] -rw------- 1 boinc boinc  1495908 Feb 23 12:08 HITS.pool.root.1
[2024-02-23 12:09:12] -rw------- 1 boinc boinc  2068480 Feb 23 12:09 result.tar.gz
12:09:13 (3024985): run_atlas exited; CPU time 325.550349
12:09:13 (3024985): called boinc_finish(0)

</stderr_txt>
]]>


©2025 CERN