Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
09:25:21 (3905570): wrapper (7.7.26015): starting
09:25:21 (3905570): wrapper: running run_atlas (--nthreads 4)
[2024-02-26 09:25:21] Arguments: --nthreads 4
[2024-02-26 09:25:21] Threads: 4
[2024-02-26 09:25:21] Checking for CVMFS
[2024-02-26 09:25:24] Probing /cvmfs/atlas.cern.ch... OK
[2024-02-26 09:25:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-02-26 09:25:25] Running cvmfs_config stat atlas.cern.ch
[2024-02-26 09:25:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-02-26 09:25:25] 2.9.2.0 3905777 0 24472 129854 3 1 3557899 4194305 0 130560 0 0 0.000 963 1621 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2024-02-26 09:25:25] CVMFS is ok
[2024-02-26 09:25:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-02-26 09:25:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-02-26 09:25:25] Small home clusters do not require a local http proxy but it is suggested if
[2024-02-26 09:25:25] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-02-26 09:25:25] Further information can be found at the LHC@home message board.
[2024-02-26 09:25:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-02-26 09:25:25] Checking for apptainer binary...
[2024-02-26 09:25:25] apptainer is not installed, using version from CVMFS
[2024-02-26 09:25:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-02-26 09:25:25] WC5950
[2024-02-26 09:25:25] apptainer works
[2024-02-26 09:25:25] Set ATHENA_PROC_NUMBER=4
[2024-02-26 09:25:25] Set ATHENA_CORE_NUMBER=4
[2024-02-26 09:25:25] Starting ATLAS job with PandaID=6126881824
[2024-02-26 09:25:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-02-26 09:37:44]  *** The last 200 lines of the pilot log: ***
[2024-02-26 09:37:44] 2024-02-26 14:37:15,263 | INFO     | [prepare_destinations][pl]: allowed (local) destinations: ['NDGF-T1_DATADISK']
[2024-02-26 09:37:44] 2024-02-26 14:37:15,263 | INFO     | [prepare_destinations][pl]: resolved default destination ddm=NDGF-T1_DATADISK
[2024-02-26 09:37:44] 2024-02-26 14:37:15,263 | INFO     | trying to use copytool=mv for activity=['pl', 'pw', 'w', 'default']
[2024-02-26 09:37:44] 2024-02-26 14:37:15,326 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2024-02-26 09:37:44] 2024-02-26 14:37:15,326 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2024-02-26 09:37:44]  activity=['pl', 'pw', 'w', 'default']
[2024-02-26 09:37:44]  allow_lan=True
[2024-02-26 09:37:44]  allow_wan=False
[2024-02-26 09:37:44]  checkinputsize=True
[2024-02-26 09:37:44]  checksum={'adler32': '6b051b82'}
[2024-02-26 09:37:44]  dataset=hc_test.gangarbt.hc20286787.tid1184.BOINC-TEST.138
[2024-02-26 09:37:44]  ddm_activity=['write_lan', 'write_wan']
[2024-02-26 09:37:44]  ddmendpoint=NDGF-T1_DATADISK
[2024-02-26 09:37:44]  direct_access_lan=False
[2024-02-26 09:37:44]  direct_access_wan=False
[2024-02-26 09:37:44]  domain=
[2024-02-26 09:37:44]  filesize=153721
[2024-02-26 09:37:44]  filetype=log
[2024-02-26 09:37:44]  guid=472b392b-5b16-40a2-b6f9-947a540ce344
[2024-02-26 09:37:44]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-02-26 09:37:44]  is_tar=False
[2024-02-26 09:37:44]  lfn=710aff3f-4c08-4ed1-8a5a-fefd7b16a7fa_86521.1.job.log.tgz
[2024-02-26 09:37:44]  mtime=0
[2024-02-26 09:37:44]  protocol_id=None
[2024-02-26 09:37:44]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-02-26 09:37:44]  replicas=None
[2024-02-26 09:37:44]  scope=hc_test
[2024-02-26 09:37:44]  status=None
[2024-02-26 09:37:44]  status_code=0
[2024-02-26 09:37:44]  storage_token=
[2024-02-26 09:37:44]  surl=/var/lib/boinc-client/slots/12/PanDA_Pilot-6126881824/710aff3f-4c08-4ed1-8a5a-fefd7b16a7fa_86521.1.job.log.tgz
[2024-02-26 09:37:44]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/8d/ab/710aff3f-4c08-4ed1-8a5a-fefd7b16a7fa_86521.1.job.log.tgz
[2024-02-26 09:37:44]  workdir=None
[2024-02-26 09:37:44] ]
[2024-02-26 09:37:44] 2024-02-26 14:37:15,343 | INFO     | transferring file 710aff3f-4c08-4ed1-8a5a-fefd7b16a7fa_86521.1.job.log.tgz from /var/lib/boinc-client/slots/12/PanDA_Pilot-6126881824/710aff3f-4c08-4ed1-8a5a-fefd7
[2024-02-26 09:37:44] 2024-02-26 14:37:15,343 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/12/PanDA_Pilot-6126881824/710aff3f-4c08-4ed1-8a5a-fefd7b16a7fa_86521.1.job.log.tgz /var/lib/boinc-cl
[2024-02-26 09:37:44] 2024-02-26 14:37:15,357 | INFO     | adding to output.list: 710aff3f-4c08-4ed1-8a5a-fefd7b16a7fa_86521.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/8d/ab/710aff3f-4c08-
[2024-02-26 09:37:44] 2024-02-26 14:37:15,358 | INFO     | summary of transferred files:
[2024-02-26 09:37:44] 2024-02-26 14:37:15,358 | INFO     |  -- lfn=710aff3f-4c08-4ed1-8a5a-fefd7b16a7fa_86521.1.job.log.tgz, status_code=0, status=transferred
[2024-02-26 09:37:44] 2024-02-26 14:37:15,358 | INFO     | stage-out finished correctly
[2024-02-26 09:37:44] 2024-02-26 14:37:17,381 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-02-26 09:37:44] 2024-02-26 14:37:17,434 | INFO     | job 6126881824 has state=finished
[2024-02-26 09:37:44] 2024-02-26 14:37:17,434 | INFO     | preparing for final server update for job 6126881824 in state='finished'
[2024-02-26 09:37:44] 2024-02-26 14:37:17,435 | INFO     | this job has now completed (state=finished)
[2024-02-26 09:37:44] 2024-02-26 14:37:17,435 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-02-26 09:37:44] 2024-02-26 14:37:17,435 | INFO     | job 6126881824 has finished - writing final server update
[2024-02-26 09:37:44] 2024-02-26 14:37:17,435 | INFO     | total number of processed events: 2 (read)
[2024-02-26 09:37:44] 2024-02-26 14:37:17,457 | INFO     | executing command: lscpu
[2024-02-26 09:37:44] 2024-02-26 14:37:17,499 | INFO     | found 16 cores (16 cores per socket, 1 sockets)
[2024-02-26 09:37:44] 2024-02-26 14:37:17,499 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-02-26 09:37:44] 2024-02-26 14:37:17,523 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-02-26 09:37:44] 2024-02-26 14:37:23,195 | INFO     | CPU arch script returned: x86-64-v3
[2024-02-26 09:37:44] 2024-02-26 14:37:23,195 | INFO     | using path: /var/lib/boinc-client/slots/12/PanDA_Pilot-6126881824/memory_monitor_summary.json (trf name=prmon)
[2024-02-26 09:37:44] 2024-02-26 14:37:23,198 | INFO     | extracted standard info from prmon json
[2024-02-26 09:37:44] 2024-02-26 14:37:23,198 | INFO     | extracted standard memory fields from prmon json
[2024-02-26 09:37:44] 2024-02-26 14:37:23,199 | WARNING  | wrong length of table data, x=[1708957865.0, 1708957926.0, 1708957987.0, 1708958048.0, 1708958109.0], y=[958317.0, 1088923.0, 1589604.0, 1608606.0, 1615234.0] (mus
[2024-02-26 09:37:44] 2024-02-26 14:37:23,200 | INFO     | ..............................
[2024-02-26 09:37:44] 2024-02-26 14:37:23,200 | INFO     | . Timing measurements:
[2024-02-26 09:37:44] 2024-02-26 14:37:23,200 | INFO     | . get job = 0 s
[2024-02-26 09:37:44] 2024-02-26 14:37:23,200 | INFO     | . initial setup = 2 s
[2024-02-26 09:37:44] 2024-02-26 14:37:23,200 | INFO     | . payload setup = 5 s
[2024-02-26 09:37:44] 2024-02-26 14:37:23,200 | INFO     | . stage-in = 0 s
[2024-02-26 09:37:44] 2024-02-26 14:37:23,200 | INFO     | . payload execution = 675 s
[2024-02-26 09:37:44] 2024-02-26 14:37:23,200 | INFO     | . stage-out = 0 s
[2024-02-26 09:37:44] 2024-02-26 14:37:23,200 | INFO     | . log creation = 0 s
[2024-02-26 09:37:44] 2024-02-26 14:37:23,200 | INFO     | ..............................
[2024-02-26 09:37:44] 2024-02-26 14:37:23,260 | WARNING  | process 3917135 is no longer using CPU - aborting
[2024-02-26 09:37:44] 2024-02-26 14:37:23,260 | INFO     | aborting job monitoring since job object (job id=6126881824) has expired
[2024-02-26 09:37:44] 2024-02-26 14:37:23,672 | INFO     | 
[2024-02-26 09:37:44] 2024-02-26 14:37:23,672 | INFO     | job summary report
[2024-02-26 09:37:44] 2024-02-26 14:37:23,672 | INFO     | --------------------------------------------------
[2024-02-26 09:37:44] 2024-02-26 14:37:23,672 | INFO     | PanDA job id: 6126881824
[2024-02-26 09:37:44] 2024-02-26 14:37:23,672 | INFO     | task id: NULL
[2024-02-26 09:37:44] 2024-02-26 14:37:23,672 | INFO     | errors: (none)
[2024-02-26 09:37:44] 2024-02-26 14:37:23,672 | INFO     | status: LOG_TRANSFER = DONE 
[2024-02-26 09:37:44] 2024-02-26 14:37:23,672 | INFO     | pilot state: finished 
[2024-02-26 09:37:44] 2024-02-26 14:37:23,672 | INFO     | transexitcode: 0
[2024-02-26 09:37:44] 2024-02-26 14:37:23,672 | INFO     | exeerrorcode: 0
[2024-02-26 09:37:44] 2024-02-26 14:37:23,672 | INFO     | exeerrordiag: 
[2024-02-26 09:37:44] 2024-02-26 14:37:23,672 | INFO     | exitcode: 0
[2024-02-26 09:37:44] 2024-02-26 14:37:23,672 | INFO     | exitmsg: OK
[2024-02-26 09:37:44] 2024-02-26 14:37:23,672 | INFO     | cpuconsumptiontime: 347 s
[2024-02-26 09:37:44] 2024-02-26 14:37:23,672 | INFO     | nevents: 2
[2024-02-26 09:37:44] 2024-02-26 14:37:23,672 | INFO     | neventsw: 0
[2024-02-26 09:37:44] 2024-02-26 14:37:23,672 | INFO     | pid: 3917135
[2024-02-26 09:37:44] 2024-02-26 14:37:23,672 | INFO     | pgrp: 3917135
[2024-02-26 09:37:44] 2024-02-26 14:37:23,673 | INFO     | corecount: 4
[2024-02-26 09:37:44] 2024-02-26 14:37:23,673 | INFO     | event service: False
[2024-02-26 09:37:44] 2024-02-26 14:37:23,673 | INFO     | sizes: {0: 2392963, 3: 2393169, 11: 2393197, 684: 2421926, 686: 2421926, 692: 2422148}
[2024-02-26 09:37:44] 2024-02-26 14:37:23,673 | INFO     | --------------------------------------------------
[2024-02-26 09:37:44] 2024-02-26 14:37:23,673 | INFO     | 
[2024-02-26 09:37:44] 2024-02-26 14:37:23,673 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/12
[2024-02-26 09:37:44] 2024-02-26 14:37:23,694 | INFO     | queue jobs had 0 job(s) [purged]
[2024-02-26 09:37:44] 2024-02-26 14:37:23,694 | INFO     | queue payloads had 0 job(s) [purged]
[2024-02-26 09:37:44] 2024-02-26 14:37:23,694 | INFO     | queue data_in had 0 job(s) [purged]
[2024-02-26 09:37:44] 2024-02-26 14:37:23,694 | INFO     | queue data_out had 0 job(s) [purged]
[2024-02-26 09:37:44] 2024-02-26 14:37:23,694 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-02-26 09:37:44] 2024-02-26 14:37:23,694 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-02-26 09:37:44] 2024-02-26 14:37:23,694 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-02-26 09:37:44] 2024-02-26 14:37:23,694 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-02-26 09:37:44] 2024-02-26 14:37:23,694 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-02-26 09:37:44] 2024-02-26 14:37:23,694 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-02-26 09:37:44] 2024-02-26 14:37:23,694 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-02-26 09:37:44] 2024-02-26 14:37:23,695 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-02-26 09:37:44] 2024-02-26 14:37:23,695 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-02-26 09:37:44] 2024-02-26 14:37:23,695 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-02-26 09:37:44] 2024-02-26 14:37:23,695 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-02-26 09:37:44] 2024-02-26 14:37:23,695 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-02-26 09:37:44] 2024-02-26 14:37:23,695 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-02-26 09:37:44] 2024-02-26 14:37:23,695 | INFO     | queue completed_jobids has 1 job(s)
[2024-02-26 09:37:44] 2024-02-26 14:37:23,695 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-02-26 09:37:44] 2024-02-26 14:37:23,695 | INFO     | queue messages had 0 job(s) [purged]
[2024-02-26 09:37:44] 2024-02-26 14:37:23,695 | INFO     | job 6126881824 has completed (purged errors)
[2024-02-26 09:37:44] 2024-02-26 14:37:23,695 | INFO     | overall cleanup function is called
[2024-02-26 09:37:44] 2024-02-26 14:37:24,701 | INFO     | --- collectZombieJob: --- 10, [3917135]
[2024-02-26 09:37:44] 2024-02-26 14:37:24,701 | INFO     | zombie collector waiting for pid 3917135
[2024-02-26 09:37:44] 2024-02-26 14:37:24,702 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-02-26 09:37:44] 2024-02-26 14:37:25,704 | INFO     | collected zombie processes
[2024-02-26 09:37:44] 2024-02-26 14:37:25,704 | INFO     | will now attempt to kill all subprocesses of pid=3917135
[2024-02-26 09:37:44] 2024-02-26 14:37:25,746 | INFO     | process IDs to be killed: [3917135] (in reverse order)
[2024-02-26 09:37:44] 2024-02-26 14:37:25,781 | WARNING  | found no corresponding commands to process id(s)
[2024-02-26 09:37:44] 2024-02-26 14:37:25,781 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-02-26 09:37:44] 2024-02-26 14:37:25,784 | INFO     | did not find any defunct processes belonging to 3917135
[2024-02-26 09:37:44] 2024-02-26 14:37:25,786 | INFO     | did not find any defunct processes belonging to 3917135
[2024-02-26 09:37:44] 2024-02-26 14:37:25,786 | INFO     | ready for new job
[2024-02-26 09:37:44] 2024-02-26 14:37:25,786 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-02-26 09:37:44] 2024-02-26 14:37:25,787 | INFO     | **************************************
[2024-02-26 09:37:44] 2024-02-26 14:37:25,787 | INFO     | ***  PanDA Pilot version 3.7.1.50  ***
[2024-02-26 09:37:44] 2024-02-26 14:37:25,787 | INFO     | **************************************
[2024-02-26 09:37:44] 2024-02-26 14:37:25,787 | INFO     | 
[2024-02-26 09:37:44] 2024-02-26 14:37:25,805 | INFO     | architecture information:
[2024-02-26 09:37:44] 2024-02-26 14:37:25,805 | INFO     | executing command: cat /etc/os-release
[2024-02-26 09:37:44] 2024-02-26 14:37:25,816 | INFO     | cat /etc/os-release:
[2024-02-26 09:37:44] NAME="CentOS Linux"
[2024-02-26 09:37:44] VERSION="7 (Core)"
[2024-02-26 09:37:44] ID="centos"
[2024-02-26 09:37:44] ID_LIKE="rhel fedora"
[2024-02-26 09:37:44] VERSION_ID="7"
[2024-02-26 09:37:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-02-26 09:37:44] ANSI_COLOR="0;31"
[2024-02-26 09:37:44] CPE_NAME="cpe:/o:centos:centos:7"
[2024-02-26 09:37:44] HOME_URL="https://www.centos.org/"
[2024-02-26 09:37:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-02-26 09:37:44] 
[2024-02-26 09:37:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-02-26 09:37:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-02-26 09:37:44] REDHAT_SUPPORT_PRODUCT="centos"
[2024-02-26 09:37:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-02-26 09:37:44] 
[2024-02-26 09:37:44] 2024-02-26 14:37:25,816 | INFO     | **************************************
[2024-02-26 09:37:44] 2024-02-26 14:37:26,319 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/12
[2024-02-26 09:37:44] 2024-02-26 14:37:26,331 | INFO     | sufficient remaining disk space (376839340032 B)
[2024-02-26 09:37:44] 2024-02-26 14:37:26,331 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-02-26 09:37:44] 2024-02-26 14:37:26,331 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-02-26 09:37:44] 2024-02-26 14:37:26,331 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-02-26 09:37:44] 2024-02-26 14:37:26,331 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-02-26 09:37:44] 2024-02-26 14:37:26,331 | INFO     | found 0 job(s) in 20 queues
[2024-02-26 09:37:44] 2024-02-26 14:37:26,332 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-02-26 09:37:44] 2024-02-26 14:37:26,332 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-02-26 09:37:44] 2024-02-26 14:37:26,764 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-02-26 09:37:44] 2024-02-26 14:37:26,764 | INFO     | aborting loop
[2024-02-26 09:37:44] 2024-02-26 14:37:26,782 | INFO     | all job control threads have been joined
[2024-02-26 09:37:44] 2024-02-26 14:37:26,948 | INFO     | all data control threads have been joined
[2024-02-26 09:37:44] 2024-02-26 14:37:27,336 | INFO     | [payload] validate_post thread has finished
[2024-02-26 09:37:44] 2024-02-26 14:37:27,336 | INFO     | [job] retrieve thread has finished
[2024-02-26 09:37:44] 2024-02-26 14:37:27,389 | INFO     | all payload control threads have been joined
[2024-02-26 09:37:44] 2024-02-26 14:37:27,660 | INFO     | [data] copytool_in thread has finished
[2024-02-26 09:37:44] 2024-02-26 14:37:27,744 | INFO     | [job] validate thread has finished
[2024-02-26 09:37:44] 2024-02-26 14:37:27,769 | INFO     | [job] job monitor thread has finished
[2024-02-26 09:37:44] 2024-02-26 14:37:27,784 | INFO     | [job] control thread has finished
[2024-02-26 09:37:44] 2024-02-26 14:37:27,868 | INFO     | [job] create_data_payload thread has finished
[2024-02-26 09:37:44] 2024-02-26 14:37:27,940 | INFO     | [payload] failed_post thread has finished
[2024-02-26 09:37:44] 2024-02-26 14:37:27,943 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-02-26 09:37:44] 2024-02-26 14:37:27,953 | INFO     | [data] control thread has finished
[2024-02-26 09:37:44] 2024-02-26 14:37:28,012 | INFO     | [payload] validate_pre thread has finished
[2024-02-26 09:37:44] 2024-02-26 14:37:28,076 | INFO     | [payload] execute_payloads thread has finished
[2024-02-26 09:37:44] 2024-02-26 14:37:28,265 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-02-26 09:37:44] 2024-02-26 14:37:28,336 | INFO     | [data] copytool_out thread has finished
[2024-02-26 09:37:44] 2024-02-26 14:37:28,394 | INFO     | [payload] control thread has finished
[2024-02-26 09:37:44] 2024-02-26 14:37:29,269 | INFO     | [job] queue monitor thread has finished
[2024-02-26 09:37:44] 2024-02-26 14:37:31,948 | INFO     | [data] queue_monitor thread has finished
[2024-02-26 09:37:44] 2024-02-26 14:37:37,336 | INFO     | job.realtimelogging is not enabled
[2024-02-26 09:37:44] 2024-02-26 14:37:38,340 | INFO     | [payload] run_realtimelog thread has finished
[2024-02-26 09:37:44] 2024-02-26 14:37:39,476 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139638293235520)>', '<ExcThread(monitor, started 139638010263296)>']
[2024-02-26 09:37:44] 2024-02-26 14:37:40,389 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-02-26 09:37:44] 2024-02-26 14:37:40,389 | INFO     | [monitor] control thread has ended
[2024-02-26 09:37:44] 2024-02-26 14:37:44,500 | INFO     | all workflow threads have been joined
[2024-02-26 09:37:44] 2024-02-26 14:37:44,500 | INFO     | end of generic workflow (traces error code: 0)
[2024-02-26 09:37:44] 2024-02-26 14:37:44,500 | INFO     | traces error code: 0
[2024-02-26 09:37:44] 2024-02-26 14:37:44,500 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-02-26 09:37:44] 2024-02-26 14:37:44,540 [wrapper] ==== pilot stdout END ====
[2024-02-26 09:37:44] 2024-02-26 14:37:44,543 [wrapper] ==== wrapper stdout RESUME ====
[2024-02-26 09:37:44] 2024-02-26 14:37:44,545 [wrapper] pilotpid: 3909898
[2024-02-26 09:37:44] 2024-02-26 14:37:44,548 [wrapper] Pilot exit status: 0
[2024-02-26 09:37:44] 2024-02-26 14:37:44,555 [wrapper] pandaids: 6126881824
[2024-02-26 09:37:44] 2024-02-26 14:37:44,579 [wrapper] cleanup: SIGTERM to supervisor_pilot 3909903 3909899
[2024-02-26 09:37:44] 2024-02-26 14:37:44,582 [wrapper] Test setup, not cleaning
[2024-02-26 09:37:44] 2024-02-26 14:37:44,584 [wrapper] ==== wrapper stdout END ====
[2024-02-26 09:37:44] 2024-02-26 14:37:44,586 [wrapper] ==== wrapper stderr END ====
[2024-02-26 09:37:44] 2024-02-26 14:37:44,592 [wrapper] apfmon messages muted
[2024-02-26 09:37:44]  *** Error codes and diagnostics ***
[2024-02-26 09:37:44]     "exeErrorCode": 0,
[2024-02-26 09:37:44]     "exeErrorDiag": "",
[2024-02-26 09:37:44]     "pilotErrorCode": 0,
[2024-02-26 09:37:44]     "pilotErrorDiag": "",
[2024-02-26 09:37:44]  *** Listing of results directory ***
[2024-02-26 09:37:44] total 44500
[2024-02-26 09:37:44] -rw-r--r-- 1 boinc boinc   460308 Feb 26 06:54 pilot3.tar.gz
[2024-02-26 09:37:44] -rwx------ 1 boinc boinc    32500 Feb 26 07:11 runpilot2-wrapper.sh
[2024-02-26 09:37:44] -rw-r--r-- 1 boinc boinc     4388 Feb 26 07:11 queuedata.json
[2024-02-26 09:37:44] -rw-r--r-- 1 boinc boinc      107 Feb 26 09:25 wrapper_26015_x86_64-pc-linux-gnu
[2024-02-26 09:37:44] -rwxr-xr-x 1 boinc boinc     7986 Feb 26 09:25 run_atlas
[2024-02-26 09:37:44] -rw-r--r-- 1 boinc boinc      112 Feb 26 09:25 job.xml
[2024-02-26 09:37:44] -rw-r--r-- 2 boinc boinc    17618 Feb 26 09:25 start_atlas.sh
[2024-02-26 09:37:44] drwxrwx--x 2 boinc boinc     4096 Feb 26 09:25 shared
[2024-02-26 09:37:44] -rw-r--r-- 2 boinc boinc   472030 Feb 26 09:25 input.tar.gz
[2024-02-26 09:37:44] -rw-r--r-- 1 boinc boinc     9364 Feb 26 09:25 init_data.xml
[2024-02-26 09:37:44] -rw-r--r-- 2 boinc boinc 37965264 Feb 26 09:25 EVNT.04972714._000027.pool.root.1
[2024-02-26 09:37:44] -rw-r--r-- 1 boinc boinc        0 Feb 26 09:25 boinc_lockfile
[2024-02-26 09:37:44] -rw-r--r-- 1 boinc boinc     2757 Feb 26 09:25 pandaJob.out
[2024-02-26 09:37:44] -rw------- 1 boinc boinc      424 Feb 26 09:25 setup.sh.local
[2024-02-26 09:37:44] -rw------- 1 boinc boinc   970359 Feb 26 09:25 agis_schedconf.cvmfs.json
[2024-02-26 09:37:44] -rw------- 1 boinc boinc        0 Feb 26 09:25 agis_ddmendpoints.agis.ALL.json
[2024-02-26 09:37:44] -rw------- 1 boinc boinc  1324827 Feb 26 09:25 cric_ddmendpoints.json
[2024-02-26 09:37:44] drwx------ 4 boinc boinc     4096 Feb 26 09:25 pilot3
[2024-02-26 09:37:44] -rw------- 1 boinc boinc       95 Feb 26 09:36 pilot_heartbeat.json
[2024-02-26 09:37:44] -rw------- 1 boinc boinc  1794005 Feb 26 09:37 output.1.710aff3f-4c08-4ed1-8a5a-fefd7b16a7fa_86521.pool.root
[2024-02-26 09:37:44] -rw-r--r-- 1 boinc boinc      532 Feb 26 09:37 boinc_task_state.xml
[2024-02-26 09:37:44] -rw------- 1 boinc boinc     1003 Feb 26 09:37 memory_monitor_summary.json
[2024-02-26 09:37:44] -rw------- 1 boinc boinc   153721 Feb 26 09:37 710aff3f-4c08-4ed1-8a5a-fefd7b16a7fa_86521.1.job.log.tgz
[2024-02-26 09:37:44] -rw------- 1 boinc boinc     6559 Feb 26 09:37 heartbeat.json
[2024-02-26 09:37:44] -rw-r--r-- 1 boinc boinc     8192 Feb 26 09:37 boinc_mmap_file
[2024-02-26 09:37:44] -rw-r--r-- 1 boinc boinc       24 Feb 26 09:37 wrapper_checkpoint.txt
[2024-02-26 09:37:44] -rw------- 1 boinc boinc     4419 Feb 26 09:37 pilotlog.txt
[2024-02-26 09:37:44] -rw------- 1 boinc boinc   119837 Feb 26 09:37 710aff3f-4c08-4ed1-8a5a-fefd7b16a7fa_86521.1.job.log
[2024-02-26 09:37:44] -rw------- 1 boinc boinc      464 Feb 26 09:37 output.list
[2024-02-26 09:37:44] -rw-r--r-- 1 boinc boinc      748 Feb 26 09:37 runtime_log
[2024-02-26 09:37:44] -rw------- 1 boinc boinc  2088960 Feb 26 09:37 result.tar.gz
[2024-02-26 09:37:44] -rw------- 1 boinc boinc      623 Feb 26 09:37 WSOODmg0oy4n7Olcko1bjSoqABFKDmABFKDmyeZQDmYCLKDmh03axm.diag
[2024-02-26 09:37:44] -rw-r--r-- 1 boinc boinc    12098 Feb 26 09:37 runtime_log.err
[2024-02-26 09:37:44] -rw-r--r-- 1 boinc boinc    21271 Feb 26 09:37 stderr.txt
[2024-02-26 09:37:44] HITS file was successfully produced:
[2024-02-26 09:37:44] -rw------- 1 boinc boinc 1794005 Feb 26 09:37 shared/HITS.pool.root.1
[2024-02-26 09:37:44]  *** Contents of shared directory: ***
[2024-02-26 09:37:44] total 41356
[2024-02-26 09:37:44] -rw-r--r-- 2 boinc boinc    17618 Feb 26 09:25 start_atlas.sh
[2024-02-26 09:37:44] -rw-r--r-- 2 boinc boinc   472030 Feb 26 09:25 input.tar.gz
[2024-02-26 09:37:44] -rw-r--r-- 2 boinc boinc 37965264 Feb 26 09:25 ATLAS.root_0
[2024-02-26 09:37:44] -rw------- 1 boinc boinc  1794005 Feb 26 09:37 HITS.pool.root.1
[2024-02-26 09:37:44] -rw------- 1 boinc boinc  2088960 Feb 26 09:37 result.tar.gz
09:37:45 (3905570): run_atlas exited; CPU time 345.034597
09:37:45 (3905570): called boinc_finish(0)

</stderr_txt>
]]>

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