Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
13:21:10 (4018920): wrapper (7.7.26015): starting
13:21:10 (4018920): wrapper: running run_atlas (--nthreads 4)
[2024-02-26 13:21:10] Arguments: --nthreads 4
[2024-02-26 13:21:10] Threads: 4
[2024-02-26 13:21:10] Checking for CVMFS
[2024-02-26 13:21:10] Probing /cvmfs/atlas.cern.ch... OK
[2024-02-26 13:21:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-02-26 13:21:10] Running cvmfs_config stat atlas.cern.ch
[2024-02-26 13:21:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-02-26 13:21:10] 2.9.2.0 4000248 1 46460 129862 2 74 3667159 4194305 539 130560 0 50225 99.995 1098 728 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2024-02-26 13:21:10] CVMFS is ok
[2024-02-26 13:21:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-02-26 13:21:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-02-26 13:21:10] Small home clusters do not require a local http proxy but it is suggested if
[2024-02-26 13:21:10] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-02-26 13:21:10] Further information can be found at the LHC@home message board.
[2024-02-26 13:21:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-02-26 13:21:10] Checking for apptainer binary...
[2024-02-26 13:21:10] apptainer is not installed, using version from CVMFS
[2024-02-26 13:21:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-02-26 13:21:10] WC5950
[2024-02-26 13:21:10] apptainer works
[2024-02-26 13:21:10] Set ATHENA_PROC_NUMBER=4
[2024-02-26 13:21:10] Set ATHENA_CORE_NUMBER=4
[2024-02-26 13:21:10] Starting ATLAS job with PandaID=6127271171
[2024-02-26 13:21:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-02-26 13:33:27]  *** The last 200 lines of the pilot log: ***
[2024-02-26 13:33:27] 2024-02-26 18:33:08,922 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2024-02-26 13:33:27] 2024-02-26 18:33:08,923 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2024-02-26 13:33:27]  activity=['pl', 'pw', 'w', 'default']
[2024-02-26 13:33:27]  allow_lan=True
[2024-02-26 13:33:27]  allow_wan=False
[2024-02-26 13:33:27]  checkinputsize=True
[2024-02-26 13:33:27]  checksum={'adler32': '2eb51ae1'}
[2024-02-26 13:33:27]  dataset=hc_test.gangarbt.hc20286841.tid1184.BOINC-TEST.23
[2024-02-26 13:33:27]  ddm_activity=['write_lan', 'write_wan']
[2024-02-26 13:33:27]  ddmendpoint=NDGF-T1_DATADISK
[2024-02-26 13:33:27]  direct_access_lan=False
[2024-02-26 13:33:27]  direct_access_wan=False
[2024-02-26 13:33:27]  domain=
[2024-02-26 13:33:27]  filesize=153518
[2024-02-26 13:33:27]  filetype=log
[2024-02-26 13:33:27]  guid=7cbc146b-6d73-4477-bbc7-47810c2609c3
[2024-02-26 13:33:27]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-02-26 13:33:27]  is_tar=False
[2024-02-26 13:33:27]  lfn=d1b0089a-8a4f-4de4-84e9-d88dc6e63d56_22339.1.job.log.tgz
[2024-02-26 13:33:27]  mtime=0
[2024-02-26 13:33:27]  protocol_id=None
[2024-02-26 13:33:27]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-02-26 13:33:27]  replicas=None
[2024-02-26 13:33:27]  scope=hc_test
[2024-02-26 13:33:27]  status=None
[2024-02-26 13:33:27]  status_code=0
[2024-02-26 13:33:27]  storage_token=
[2024-02-26 13:33:27]  surl=/var/lib/boinc-client/slots/3/PanDA_Pilot-6127271171/d1b0089a-8a4f-4de4-84e9-d88dc6e63d56_22339.1.job.log.tgz
[2024-02-26 13:33:27]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/05/56/d1b0089a-8a4f-4de4-84e9-d88dc6e63d56_22339.1.job.log.tgz
[2024-02-26 13:33:27]  workdir=None
[2024-02-26 13:33:27] ]
[2024-02-26 13:33:27] 2024-02-26 18:33:08,953 | INFO     | transferring file d1b0089a-8a4f-4de4-84e9-d88dc6e63d56_22339.1.job.log.tgz from /var/lib/boinc-client/slots/3/PanDA_Pilot-6127271171/d1b0089a-8a4f-4de4-84e9-d88dc6
[2024-02-26 13:33:27] 2024-02-26 18:33:08,953 | WARNING  | process 4029927 is no longer using CPU - aborting
[2024-02-26 13:33:27] 2024-02-26 18:33:08,953 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/3/PanDA_Pilot-6127271171/d1b0089a-8a4f-4de4-84e9-d88dc6e63d56_22339.1.job.log.tgz /var/lib/boinc-cli
[2024-02-26 13:33:27] 2024-02-26 18:33:08,953 | INFO     | will not send any job update
[2024-02-26 13:33:27] 2024-02-26 18:33:08,965 | INFO     | adding to output.list: d1b0089a-8a4f-4de4-84e9-d88dc6e63d56_22339.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/05/56/d1b0089a-8a4f-
[2024-02-26 13:33:27] 2024-02-26 18:33:08,965 | INFO     | summary of transferred files:
[2024-02-26 13:33:27] 2024-02-26 18:33:08,965 | INFO     |  -- lfn=d1b0089a-8a4f-4de4-84e9-d88dc6e63d56_22339.1.job.log.tgz, status_code=0, status=transferred
[2024-02-26 13:33:27] 2024-02-26 18:33:08,965 | INFO     | stage-out finished correctly
[2024-02-26 13:33:27] 2024-02-26 18:33:10,439 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-02-26 13:33:27] 2024-02-26 18:33:11,456 | INFO     | monitor loop #61: job 0:6127271171 is in state 'finished'
[2024-02-26 13:33:27] 2024-02-26 18:33:11,456 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-26 13:33:27] 2024-02-26 18:33:12,072 | INFO     | job 6127271171 has state=finished
[2024-02-26 13:33:27] 2024-02-26 18:33:12,072 | INFO     | preparing for final server update for job 6127271171 in state='finished'
[2024-02-26 13:33:27] 2024-02-26 18:33:12,073 | INFO     | this job has now completed (state=finished)
[2024-02-26 13:33:27] 2024-02-26 18:33:12,073 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-02-26 13:33:27] 2024-02-26 18:33:12,073 | INFO     | job 6127271171 has finished - writing final server update
[2024-02-26 13:33:27] 2024-02-26 18:33:12,073 | INFO     | total number of processed events: 2 (read)
[2024-02-26 13:33:27] 2024-02-26 18:33:12,093 | INFO     | executing command: lscpu
[2024-02-26 13:33:27] 2024-02-26 18:33:12,126 | INFO     | found 16 cores (16 cores per socket, 1 sockets)
[2024-02-26 13:33:27] 2024-02-26 18:33:12,126 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-02-26 13:33:27] 2024-02-26 18:33:12,168 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-02-26 13:33:27] 2024-02-26 18:33:13,959 | INFO     | monitor loop #62: job 0:6127271171 is in state 'finished'
[2024-02-26 13:33:27] 2024-02-26 18:33:13,959 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-26 13:33:27] 2024-02-26 18:33:14,412 | INFO     | CPU arch script returned: x86-64-v3
[2024-02-26 13:33:27] 2024-02-26 18:33:14,412 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6127271171/memory_monitor_summary.json (trf name=prmon)
[2024-02-26 13:33:27] 2024-02-26 18:33:14,413 | INFO     | extracted standard info from prmon json
[2024-02-26 13:33:27] 2024-02-26 18:33:14,413 | INFO     | extracted standard memory fields from prmon json
[2024-02-26 13:33:27] 2024-02-26 18:33:14,413 | WARNING  | wrong length of table data, x=[1708972003.0, 1708972064.0, 1708972125.0, 1708972186.0, 1708972247.0], y=[962721.0, 1076118.0, 1570086.0, 1502594.0, 1512673.0] (mus
[2024-02-26 13:33:27] 2024-02-26 18:33:14,414 | INFO     | ..............................
[2024-02-26 13:33:27] 2024-02-26 18:33:14,414 | INFO     | . Timing measurements:
[2024-02-26 13:33:27] 2024-02-26 18:33:14,414 | INFO     | . get job = 0 s
[2024-02-26 13:33:27] 2024-02-26 18:33:14,414 | INFO     | . initial setup = 2 s
[2024-02-26 13:33:27] 2024-02-26 18:33:14,414 | INFO     | . payload setup = 4 s
[2024-02-26 13:33:27] 2024-02-26 18:33:14,414 | INFO     | . stage-in = 0 s
[2024-02-26 13:33:27] 2024-02-26 18:33:14,414 | INFO     | . payload execution = 689 s
[2024-02-26 13:33:27] 2024-02-26 18:33:14,414 | INFO     | . stage-out = 0 s
[2024-02-26 13:33:27] 2024-02-26 18:33:14,414 | INFO     | . log creation = 0 s
[2024-02-26 13:33:27] 2024-02-26 18:33:14,414 | INFO     | ..............................
[2024-02-26 13:33:27] 2024-02-26 18:33:14,472 | INFO     | 
[2024-02-26 13:33:27] 2024-02-26 18:33:14,472 | INFO     | job summary report
[2024-02-26 13:33:27] 2024-02-26 18:33:14,472 | INFO     | --------------------------------------------------
[2024-02-26 13:33:27] 2024-02-26 18:33:14,472 | INFO     | PanDA job id: 6127271171
[2024-02-26 13:33:27] 2024-02-26 18:33:14,472 | INFO     | task id: NULL
[2024-02-26 13:33:27] 2024-02-26 18:33:14,472 | INFO     | errors: (none)
[2024-02-26 13:33:27] 2024-02-26 18:33:14,472 | INFO     | status: LOG_TRANSFER = DONE 
[2024-02-26 13:33:27] 2024-02-26 18:33:14,472 | INFO     | pilot state: finished 
[2024-02-26 13:33:27] 2024-02-26 18:33:14,473 | INFO     | transexitcode: 0
[2024-02-26 13:33:27] 2024-02-26 18:33:14,473 | INFO     | exeerrorcode: 0
[2024-02-26 13:33:27] 2024-02-26 18:33:14,473 | INFO     | exeerrordiag: 
[2024-02-26 13:33:27] 2024-02-26 18:33:14,473 | INFO     | exitcode: 0
[2024-02-26 13:33:27] 2024-02-26 18:33:14,473 | INFO     | exitmsg: OK
[2024-02-26 13:33:27] 2024-02-26 18:33:14,473 | INFO     | cpuconsumptiontime: 354 s
[2024-02-26 13:33:27] 2024-02-26 18:33:14,473 | INFO     | nevents: 2
[2024-02-26 13:33:27] 2024-02-26 18:33:14,473 | INFO     | neventsw: 0
[2024-02-26 13:33:27] 2024-02-26 18:33:14,473 | INFO     | pid: 4029927
[2024-02-26 13:33:27] 2024-02-26 18:33:14,473 | INFO     | pgrp: 4029927
[2024-02-26 13:33:27] 2024-02-26 18:33:14,473 | INFO     | corecount: 4
[2024-02-26 13:33:27] 2024-02-26 18:33:14,473 | INFO     | event service: False
[2024-02-26 13:33:27] 2024-02-26 18:33:14,473 | INFO     | sizes: {0: 2385923, 2: 2386129, 10: 2386157, 697: 2405855, 699: 2414919, 700: 2414975, 704: 2415325}
[2024-02-26 13:33:27] 2024-02-26 18:33:14,473 | INFO     | --------------------------------------------------
[2024-02-26 13:33:27] 2024-02-26 18:33:14,473 | INFO     | 
[2024-02-26 13:33:27] 2024-02-26 18:33:14,473 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2024-02-26 13:33:27] 2024-02-26 18:33:14,483 | INFO     | queue jobs had 0 job(s) [purged]
[2024-02-26 13:33:27] 2024-02-26 18:33:14,484 | INFO     | queue payloads had 0 job(s) [purged]
[2024-02-26 13:33:27] 2024-02-26 18:33:14,484 | INFO     | queue data_in had 0 job(s) [purged]
[2024-02-26 13:33:27] 2024-02-26 18:33:14,484 | INFO     | queue data_out had 0 job(s) [purged]
[2024-02-26 13:33:27] 2024-02-26 18:33:14,484 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-02-26 13:33:27] 2024-02-26 18:33:14,484 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-02-26 13:33:27] 2024-02-26 18:33:14,484 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-02-26 13:33:27] 2024-02-26 18:33:14,484 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-02-26 13:33:27] 2024-02-26 18:33:14,484 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-02-26 13:33:27] 2024-02-26 18:33:14,484 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-02-26 13:33:27] 2024-02-26 18:33:14,484 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-02-26 13:33:27] 2024-02-26 18:33:14,484 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-02-26 13:33:27] 2024-02-26 18:33:14,484 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-02-26 13:33:27] 2024-02-26 18:33:14,484 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-02-26 13:33:27] 2024-02-26 18:33:14,484 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-02-26 13:33:27] 2024-02-26 18:33:14,484 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-02-26 13:33:27] 2024-02-26 18:33:14,484 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-02-26 13:33:27] 2024-02-26 18:33:14,484 | INFO     | queue completed_jobids has 1 job(s)
[2024-02-26 13:33:27] 2024-02-26 18:33:14,484 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-02-26 13:33:27] 2024-02-26 18:33:14,484 | INFO     | queue messages had 0 job(s) [purged]
[2024-02-26 13:33:27] 2024-02-26 18:33:14,484 | INFO     | job 6127271171 has completed (purged errors)
[2024-02-26 13:33:27] 2024-02-26 18:33:14,484 | INFO     | overall cleanup function is called
[2024-02-26 13:33:27] 2024-02-26 18:33:15,491 | INFO     | --- collectZombieJob: --- 10, [4029927]
[2024-02-26 13:33:27] 2024-02-26 18:33:15,491 | INFO     | zombie collector waiting for pid 4029927
[2024-02-26 13:33:27] 2024-02-26 18:33:15,491 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-02-26 13:33:27] 2024-02-26 18:33:16,496 | INFO     | collected zombie processes
[2024-02-26 13:33:27] 2024-02-26 18:33:16,496 | INFO     | will now attempt to kill all subprocesses of pid=4029927
[2024-02-26 13:33:27] 2024-02-26 18:33:16,551 | INFO     | process IDs to be killed: [4029927] (in reverse order)
[2024-02-26 13:33:27] 2024-02-26 18:33:16,592 | WARNING  | found no corresponding commands to process id(s)
[2024-02-26 13:33:27] 2024-02-26 18:33:16,592 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-02-26 13:33:27] 2024-02-26 18:33:16,595 | INFO     | did not find any defunct processes belonging to 4029927
[2024-02-26 13:33:27] 2024-02-26 18:33:16,598 | INFO     | did not find any defunct processes belonging to 4029927
[2024-02-26 13:33:27] 2024-02-26 18:33:16,598 | INFO     | ready for new job
[2024-02-26 13:33:27] 2024-02-26 18:33:16,598 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-02-26 13:33:27] 2024-02-26 18:33:16,598 | INFO     | **************************************
[2024-02-26 13:33:27] 2024-02-26 18:33:16,599 | INFO     | ***  PanDA Pilot version 3.7.1.50  ***
[2024-02-26 13:33:27] 2024-02-26 18:33:16,599 | INFO     | **************************************
[2024-02-26 13:33:27] 2024-02-26 18:33:16,599 | INFO     | 
[2024-02-26 13:33:27] 2024-02-26 18:33:16,617 | INFO     | architecture information:
[2024-02-26 13:33:27] 2024-02-26 18:33:16,617 | INFO     | executing command: cat /etc/os-release
[2024-02-26 13:33:27] 2024-02-26 18:33:16,627 | INFO     | cat /etc/os-release:
[2024-02-26 13:33:27] NAME="CentOS Linux"
[2024-02-26 13:33:27] VERSION="7 (Core)"
[2024-02-26 13:33:27] ID="centos"
[2024-02-26 13:33:27] ID_LIKE="rhel fedora"
[2024-02-26 13:33:27] VERSION_ID="7"
[2024-02-26 13:33:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-02-26 13:33:27] ANSI_COLOR="0;31"
[2024-02-26 13:33:27] CPE_NAME="cpe:/o:centos:centos:7"
[2024-02-26 13:33:27] HOME_URL="https://www.centos.org/"
[2024-02-26 13:33:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-02-26 13:33:27] 
[2024-02-26 13:33:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-02-26 13:33:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-02-26 13:33:27] REDHAT_SUPPORT_PRODUCT="centos"
[2024-02-26 13:33:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-02-26 13:33:27] 
[2024-02-26 13:33:27] 2024-02-26 18:33:16,627 | INFO     | **************************************
[2024-02-26 13:33:27] 2024-02-26 18:33:17,130 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2024-02-26 13:33:27] 2024-02-26 18:33:17,141 | INFO     | sufficient remaining disk space (376706170880 B)
[2024-02-26 13:33:27] 2024-02-26 18:33:17,142 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-02-26 13:33:27] 2024-02-26 18:33:17,142 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-02-26 13:33:27] 2024-02-26 18:33:17,142 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-02-26 13:33:27] 2024-02-26 18:33:17,142 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-02-26 13:33:27] 2024-02-26 18:33:17,142 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-02-26 13:33:27] 2024-02-26 18:33:17,142 | INFO     | found 0 job(s) in 20 queues
[2024-02-26 13:33:27] 2024-02-26 18:33:17,142 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-02-26 13:33:27] 2024-02-26 18:33:17,142 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-02-26 13:33:27] 2024-02-26 18:33:17,467 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-02-26 13:33:27] 2024-02-26 18:33:17,467 | INFO     | aborting loop
[2024-02-26 13:33:27] 2024-02-26 18:33:17,475 | INFO     | all data control threads have been joined
[2024-02-26 13:33:27] 2024-02-26 18:33:17,511 | INFO     | all payload control threads have been joined
[2024-02-26 13:33:27] 2024-02-26 18:33:18,144 | INFO     | [job] retrieve thread has finished
[2024-02-26 13:33:27] 2024-02-26 18:33:18,258 | INFO     | all job control threads have been joined
[2024-02-26 13:33:27] 2024-02-26 18:33:18,472 | INFO     | [job] job monitor thread has finished
[2024-02-26 13:33:27] 2024-02-26 18:33:18,480 | INFO     | [data] control thread has finished
[2024-02-26 13:33:27] 2024-02-26 18:33:18,516 | INFO     | [payload] control thread has finished
[2024-02-26 13:33:27] 2024-02-26 18:33:18,752 | INFO     | [payload] failed_post thread has finished
[2024-02-26 13:33:27] 2024-02-26 18:33:18,768 | INFO     | [payload] run_realtimelog thread has finished
[2024-02-26 13:33:27] 2024-02-26 18:33:18,789 | INFO     | [data] copytool_in thread has finished
[2024-02-26 13:33:27] 2024-02-26 18:33:19,001 | INFO     | [payload] execute_payloads thread has finished
[2024-02-26 13:33:27] 2024-02-26 18:33:19,147 | INFO     | [data] copytool_out thread has finished
[2024-02-26 13:33:27] 2024-02-26 18:33:19,260 | INFO     | [job] control thread has finished
[2024-02-26 13:33:27] 2024-02-26 18:33:19,307 | INFO     | [job] validate thread has finished
[2024-02-26 13:33:27] 2024-02-26 18:33:19,408 | INFO     | [job] create_data_payload thread has finished
[2024-02-26 13:33:27] 2024-02-26 18:33:19,472 | INFO     | [payload] validate_pre thread has finished
[2024-02-26 13:33:27] 2024-02-26 18:33:19,480 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-02-26 13:33:27] 2024-02-26 18:33:19,741 | INFO     | [payload] validate_post thread has finished
[2024-02-26 13:33:27] 2024-02-26 18:33:20,484 | INFO     | [job] queue monitor thread has finished
[2024-02-26 13:33:27] 2024-02-26 18:33:21,144 | INFO     | [data] queue_monitor thread has finished
[2024-02-26 13:33:27] 2024-02-26 18:33:22,545 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140173224859456)>', '<ExcThread(monitor, started 140172800800512)>']
[2024-02-26 13:33:27] 2024-02-26 18:33:23,168 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-02-26 13:33:27] 2024-02-26 18:33:23,168 | INFO     | [monitor] control thread has ended
[2024-02-26 13:33:27] 2024-02-26 18:33:27,555 | INFO     | all workflow threads have been joined
[2024-02-26 13:33:27] 2024-02-26 18:33:27,555 | INFO     | end of generic workflow (traces error code: 0)
[2024-02-26 13:33:27] 2024-02-26 18:33:27,556 | INFO     | traces error code: 0
[2024-02-26 13:33:27] 2024-02-26 18:33:27,556 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-02-26 13:33:27] 2024-02-26 18:33:27,596 [wrapper] ==== pilot stdout END ====
[2024-02-26 13:33:27] 2024-02-26 18:33:27,599 [wrapper] ==== wrapper stdout RESUME ====
[2024-02-26 13:33:27] 2024-02-26 18:33:27,601 [wrapper] pilotpid: 4022687
[2024-02-26 13:33:27] 2024-02-26 18:33:27,603 [wrapper] Pilot exit status: 0
[2024-02-26 13:33:27] 2024-02-26 18:33:27,610 [wrapper] pandaids: 6127271171
[2024-02-26 13:33:27] 2024-02-26 18:33:27,628 [wrapper] cleanup: SIGTERM to supervisor_pilot 4022692 4022688
[2024-02-26 13:33:27] 2024-02-26 18:33:27,631 [wrapper] Test setup, not cleaning
[2024-02-26 13:33:27] 2024-02-26 18:33:27,633 [wrapper] ==== wrapper stdout END ====
[2024-02-26 13:33:27] 2024-02-26 18:33:27,636 [wrapper] ==== wrapper stderr END ====
[2024-02-26 13:33:27] 2024-02-26 18:33:27,640 [wrapper] apfmon messages muted
[2024-02-26 13:33:27]  *** Error codes and diagnostics ***
[2024-02-26 13:33:27]     "exeErrorCode": 0,
[2024-02-26 13:33:27]     "exeErrorDiag": "",
[2024-02-26 13:33:27]     "pilotErrorCode": 0,
[2024-02-26 13:33:27]     "pilotErrorDiag": "",
[2024-02-26 13:33:27]  *** Listing of results directory ***
[2024-02-26 13:33:27] total 44676
[2024-02-26 13:33:27] -rw-r--r-- 1 boinc boinc   460308 Feb 26 12:36 pilot3.tar.gz
[2024-02-26 13:33:27] -rwx------ 1 boinc boinc    32500 Feb 26 13:08 runpilot2-wrapper.sh
[2024-02-26 13:33:27] -rw-r--r-- 1 boinc boinc     4388 Feb 26 13:08 queuedata.json
[2024-02-26 13:33:27] -rw-r--r-- 1 boinc boinc      107 Feb 26 13:21 wrapper_26015_x86_64-pc-linux-gnu
[2024-02-26 13:33:27] -rwxr-xr-x 1 boinc boinc     7986 Feb 26 13:21 run_atlas
[2024-02-26 13:33:27] -rw-r--r-- 1 boinc boinc      112 Feb 26 13:21 job.xml
[2024-02-26 13:33:27] -rw-r--r-- 2 boinc boinc 37658468 Feb 26 13:21 EVNT.04972714._000029.pool.root.1
[2024-02-26 13:33:27] -rw-r--r-- 2 boinc boinc    17618 Feb 26 13:21 start_atlas.sh
[2024-02-26 13:33:27] drwxrwx--x 2 boinc boinc     4096 Feb 26 13:21 shared
[2024-02-26 13:33:27] -rw-r--r-- 2 boinc boinc   472034 Feb 26 13:21 input.tar.gz
[2024-02-26 13:33:27] -rw-r--r-- 1 boinc boinc     9363 Feb 26 13:21 init_data.xml
[2024-02-26 13:33:27] -rw-r--r-- 1 boinc boinc        0 Feb 26 13:21 boinc_lockfile
[2024-02-26 13:33:27] -rw-r--r-- 1 boinc boinc     2752 Feb 26 13:21 pandaJob.out
[2024-02-26 13:33:27] -rw------- 1 boinc boinc      424 Feb 26 13:21 setup.sh.local
[2024-02-26 13:33:27] -rw------- 1 boinc boinc   970089 Feb 26 13:21 agis_schedconf.cvmfs.json
[2024-02-26 13:33:27] -rw------- 1 boinc boinc        0 Feb 26 13:21 agis_ddmendpoints.agis.ALL.json
[2024-02-26 13:33:27] -rw------- 1 boinc boinc  1320368 Feb 26 13:21 cric_ddmendpoints.json
[2024-02-26 13:33:27] drwx------ 4 boinc boinc     4096 Feb 26 13:21 pilot3
[2024-02-26 13:33:27] -rw------- 1 boinc boinc  2043637 Feb 26 13:32 output.1.d1b0089a-8a4f-4de4-84e9-d88dc6e63d56_22339.pool.root
[2024-02-26 13:33:27] -rw-r--r-- 1 boinc boinc      532 Feb 26 13:33 boinc_task_state.xml
[2024-02-26 13:33:27] -rw------- 1 boinc boinc      999 Feb 26 13:33 memory_monitor_summary.json
[2024-02-26 13:33:27] -rw------- 1 boinc boinc   153518 Feb 26 13:33 d1b0089a-8a4f-4de4-84e9-d88dc6e63d56_22339.1.job.log.tgz
[2024-02-26 13:33:27] -rw------- 1 boinc boinc     6560 Feb 26 13:33 heartbeat.json
[2024-02-26 13:33:27] -rw------- 1 boinc boinc       95 Feb 26 13:33 pilot_heartbeat.json
[2024-02-26 13:33:27] -rw-r--r-- 1 boinc boinc       24 Feb 26 13:33 wrapper_checkpoint.txt
[2024-02-26 13:33:27] -rw-r--r-- 1 boinc boinc     8192 Feb 26 13:33 boinc_mmap_file
[2024-02-26 13:33:27] -rw------- 1 boinc boinc     4346 Feb 26 13:33 pilotlog.txt
[2024-02-26 13:33:27] -rw------- 1 boinc boinc   121036 Feb 26 13:33 d1b0089a-8a4f-4de4-84e9-d88dc6e63d56_22339.1.job.log
[2024-02-26 13:33:27] -rw------- 1 boinc boinc      464 Feb 26 13:33 output.list
[2024-02-26 13:33:27] -rw-r--r-- 1 boinc boinc      748 Feb 26 13:33 runtime_log
[2024-02-26 13:33:27] -rw------- 1 boinc boinc  2334720 Feb 26 13:33 result.tar.gz
[2024-02-26 13:33:27] -rw------- 1 boinc boinc      623 Feb 26 13:33 sbANDmPauy4n7Olcko1bjSoqABFKDmABFKDmyeZQDmgCLKDmQx52Bn.diag
[2024-02-26 13:33:27] -rw-r--r-- 1 boinc boinc    12080 Feb 26 13:33 runtime_log.err
[2024-02-26 13:33:27] -rw-r--r-- 1 boinc boinc    21259 Feb 26 13:33 stderr.txt
[2024-02-26 13:33:27] HITS file was successfully produced:
[2024-02-26 13:33:27] -rw------- 1 boinc boinc 2043637 Feb 26 13:32 shared/HITS.pool.root.1
[2024-02-26 13:33:27]  *** Contents of shared directory: ***
[2024-02-26 13:33:27] total 41536
[2024-02-26 13:33:27] -rw-r--r-- 2 boinc boinc 37658468 Feb 26 13:21 ATLAS.root_0
[2024-02-26 13:33:27] -rw-r--r-- 2 boinc boinc    17618 Feb 26 13:21 start_atlas.sh
[2024-02-26 13:33:27] -rw-r--r-- 2 boinc boinc   472034 Feb 26 13:21 input.tar.gz
[2024-02-26 13:33:27] -rw------- 1 boinc boinc  2043637 Feb 26 13:32 HITS.pool.root.1
[2024-02-26 13:33:27] -rw------- 1 boinc boinc  2334720 Feb 26 13:33 result.tar.gz
13:33:29 (4018920): run_atlas exited; CPU time 352.162473
13:33:29 (4018920): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN