Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
19:07:35 (4116550): wrapper (7.7.26015): starting
19:07:35 (4116550): wrapper: running run_atlas (--nthreads 4)
[2024-02-26 19:07:35] Arguments: --nthreads 4
[2024-02-26 19:07:35] Threads: 4
[2024-02-26 19:07:35] Checking for CVMFS
[2024-02-26 19:07:37] Probing /cvmfs/atlas.cern.ch... OK
[2024-02-26 19:07:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-02-26 19:07:39] Running cvmfs_config stat atlas.cern.ch
[2024-02-26 19:07:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-02-26 19:07:39] 2.9.2.0 4116756 0 24424 129871 3 1 3687229 4194305 0 130560 0 0 0.000 963 3309 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2024-02-26 19:07:39] CVMFS is ok
[2024-02-26 19:07:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-02-26 19:07:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-02-26 19:07:39] Small home clusters do not require a local http proxy but it is suggested if
[2024-02-26 19:07:39] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-02-26 19:07:39] Further information can be found at the LHC@home message board.
[2024-02-26 19:07:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-02-26 19:07:39] Checking for apptainer binary...
[2024-02-26 19:07:39] apptainer is not installed, using version from CVMFS
[2024-02-26 19:07:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-02-26 19:07:39] WC5950
[2024-02-26 19:07:39] apptainer works
[2024-02-26 19:07:39] Set ATHENA_PROC_NUMBER=4
[2024-02-26 19:07:39] Set ATHENA_CORE_NUMBER=4
[2024-02-26 19:07:39] Starting ATLAS job with PandaID=6127566225
[2024-02-26 19:07:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-02-26 19:20:26]  *** The last 200 lines of the pilot log: ***
[2024-02-26 19:20:26] 2024-02-27 00:19:54,610 | INFO     | trying to use copytool=mv for activity=['pl', 'pw', 'w', 'default']
[2024-02-26 19:20:26] 2024-02-27 00:19:54,679 | INFO     | Resolved protocol to be used for transfer: '{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}': l
[2024-02-26 19:20:26] 2024-02-27 00:19:54,679 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2024-02-26 19:20:26]  activity=['pl', 'pw', 'w', 'default']
[2024-02-26 19:20:26]  allow_lan=True
[2024-02-26 19:20:26]  allow_wan=False
[2024-02-26 19:20:26]  checkinputsize=True
[2024-02-26 19:20:26]  checksum={'adler32': 'c099cb01'}
[2024-02-26 19:20:26]  dataset=hc_test.gangarbt.hc20286841.tid1184.BOINC-TEST.23
[2024-02-26 19:20:26]  ddm_activity=['write_lan', 'write_wan']
[2024-02-26 19:20:26]  ddmendpoint=NDGF-T1_DATADISK
[2024-02-26 19:20:26]  direct_access_lan=False
[2024-02-26 19:20:26]  direct_access_wan=False
[2024-02-26 19:20:26]  domain=
[2024-02-26 19:20:26]  filesize=153705
[2024-02-26 19:20:26]  filetype=log
[2024-02-26 19:20:26]  guid=b25c3329-9663-46a7-9cf3-0dd0e01ce1b7
[2024-02-26 19:20:26]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-02-26 19:20:26]  is_tar=False
[2024-02-26 19:20:26]  lfn=10740d48-4583-4910-972b-25c08b894b90_60830.1.job.log.tgz
[2024-02-26 19:20:26]  mtime=0
[2024-02-26 19:20:26]  protocol_id=None
[2024-02-26 19:20:26]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-02-26 19:20:26]  replicas=None
[2024-02-26 19:20:26]  scope=hc_test
[2024-02-26 19:20:26]  status=None
[2024-02-26 19:20:26]  status_code=0
[2024-02-26 19:20:26]  storage_token=
[2024-02-26 19:20:26]  surl=/var/lib/boinc-client/slots/11/PanDA_Pilot-6127566225/10740d48-4583-4910-972b-25c08b894b90_60830.1.job.log.tgz
[2024-02-26 19:20:26]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/ba/4a/10740d48-4583-4910-972b-25c08b894b90_60830.1.job.log.tgz
[2024-02-26 19:20:26]  workdir=None
[2024-02-26 19:20:26] ]
[2024-02-26 19:20:26] 2024-02-27 00:19:54,707 | INFO     | transferring file 10740d48-4583-4910-972b-25c08b894b90_60830.1.job.log.tgz from /var/lib/boinc-client/slots/11/PanDA_Pilot-6127566225/10740d48-4583-4910-972b-25c08
[2024-02-26 19:20:26] 2024-02-27 00:19:54,707 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/11/PanDA_Pilot-6127566225/10740d48-4583-4910-972b-25c08b894b90_60830.1.job.log.tgz /var/lib/boinc-cl
[2024-02-26 19:20:26] 2024-02-27 00:19:54,720 | INFO     | adding to output.list: 10740d48-4583-4910-972b-25c08b894b90_60830.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/ba/4a/10740d48-4583-
[2024-02-26 19:20:26] 2024-02-27 00:19:54,720 | INFO     | summary of transferred files:
[2024-02-26 19:20:26] 2024-02-27 00:19:54,720 | INFO     |  -- lfn=10740d48-4583-4910-972b-25c08b894b90_60830.1.job.log.tgz, status_code=0, status=transferred
[2024-02-26 19:20:26] 2024-02-27 00:19:54,720 | INFO     | stage-out finished correctly
[2024-02-26 19:20:26] 2024-02-27 00:19:55,000 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-02-26 19:20:26] 2024-02-27 00:19:55,609 | INFO     | 725s have passed since pilot start
[2024-02-26 19:20:26] 2024-02-27 00:19:55,892 | INFO     | job 6127566225 has state=finished
[2024-02-26 19:20:26] 2024-02-27 00:19:55,892 | INFO     | preparing for final server update for job 6127566225 in state='finished'
[2024-02-26 19:20:26] 2024-02-27 00:19:55,893 | INFO     | executing command: curl --connect-timeout 20 --max-time 120 -H "Content-Type: application/json" -X POST --upload-file /var/lib/boinc-client/slots/11/PanDA_Pilot-61
[2024-02-26 19:20:26] 2024-02-27 00:19:57,893 | INFO     | this job has now completed (state=finished)
[2024-02-26 19:20:26] 2024-02-27 00:19:57,894 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-02-26 19:20:26] 2024-02-27 00:19:57,894 | INFO     | job 6127566225 has finished - writing final server update
[2024-02-26 19:20:26] 2024-02-27 00:19:57,894 | INFO     | total number of processed events: 2 (read)
[2024-02-26 19:20:26] 2024-02-27 00:19:57,914 | INFO     | executing command: lscpu
[2024-02-26 19:20:26] 2024-02-27 00:19:57,951 | INFO     | found 16 cores (16 cores per socket, 1 sockets)
[2024-02-26 19:20:26] 2024-02-27 00:19:57,951 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-02-26 19:20:26] 2024-02-27 00:19:57,973 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-02-26 19:20:26] 2024-02-27 00:20:04,833 | INFO     | CPU arch script returned: x86-64-v3
[2024-02-26 19:20:26] 2024-02-27 00:20:04,834 | INFO     | using path: /var/lib/boinc-client/slots/11/PanDA_Pilot-6127566225/memory_monitor_summary.json (trf name=prmon)
[2024-02-26 19:20:26] 2024-02-27 00:20:04,837 | INFO     | extracted standard info from prmon json
[2024-02-26 19:20:26] 2024-02-27 00:20:04,837 | INFO     | extracted standard memory fields from prmon json
[2024-02-26 19:20:26] 2024-02-27 00:20:04,838 | WARNING  | wrong length of table data, x=[1708992800.0, 1708992861.0, 1708992922.0, 1708992983.0, 1708993044.0], y=[1024335.0, 1057611.0, 1244808.0, 1568768.0, 1586442.0] (mu
[2024-02-26 19:20:26] 2024-02-27 00:20:04,839 | INFO     | ..............................
[2024-02-26 19:20:26] 2024-02-27 00:20:04,839 | INFO     | . Timing measurements:
[2024-02-26 19:20:26] 2024-02-27 00:20:04,839 | INFO     | . get job = 0 s
[2024-02-26 19:20:26] 2024-02-27 00:20:04,839 | INFO     | . initial setup = 2 s
[2024-02-26 19:20:26] 2024-02-27 00:20:04,839 | INFO     | . payload setup = 5 s
[2024-02-26 19:20:26] 2024-02-27 00:20:04,839 | INFO     | . stage-in = 0 s
[2024-02-26 19:20:26] 2024-02-27 00:20:04,839 | INFO     | . payload execution = 699 s
[2024-02-26 19:20:26] 2024-02-27 00:20:04,839 | INFO     | . stage-out = 0 s
[2024-02-26 19:20:26] 2024-02-27 00:20:04,839 | INFO     | . log creation = 0 s
[2024-02-26 19:20:26] 2024-02-27 00:20:04,839 | INFO     | ..............................
[2024-02-26 19:20:26] 2024-02-27 00:20:04,896 | INFO     | 
[2024-02-26 19:20:26] 2024-02-27 00:20:04,896 | WARNING  | process 4128731 is no longer using CPU - aborting
[2024-02-26 19:20:26] 2024-02-27 00:20:04,896 | INFO     | job summary report
[2024-02-26 19:20:26] 2024-02-27 00:20:04,896 | INFO     | aborting job monitoring since job object (job id=6127566225) has expired
[2024-02-26 19:20:26] 2024-02-27 00:20:04,896 | INFO     | --------------------------------------------------
[2024-02-26 19:20:26] 2024-02-27 00:20:04,896 | INFO     | PanDA job id: 6127566225
[2024-02-26 19:20:26] 2024-02-27 00:20:04,896 | INFO     | task id: NULL
[2024-02-26 19:20:26] 2024-02-27 00:20:04,896 | INFO     | errors: (none)
[2024-02-26 19:20:26] 2024-02-27 00:20:04,896 | INFO     | status: LOG_TRANSFER = DONE 
[2024-02-26 19:20:26] 2024-02-27 00:20:04,897 | INFO     | pilot state: finished 
[2024-02-26 19:20:26] 2024-02-27 00:20:04,897 | INFO     | transexitcode: 0
[2024-02-26 19:20:26] 2024-02-27 00:20:04,897 | INFO     | exeerrorcode: 0
[2024-02-26 19:20:26] 2024-02-27 00:20:04,897 | INFO     | exeerrordiag: 
[2024-02-26 19:20:26] 2024-02-27 00:20:04,897 | INFO     | exitcode: 0
[2024-02-26 19:20:26] 2024-02-27 00:20:04,897 | INFO     | exitmsg: OK
[2024-02-26 19:20:26] 2024-02-27 00:20:04,897 | INFO     | cpuconsumptiontime: 334 s
[2024-02-26 19:20:26] 2024-02-27 00:20:04,897 | INFO     | nevents: 2
[2024-02-26 19:20:26] 2024-02-27 00:20:04,897 | INFO     | neventsw: 0
[2024-02-26 19:20:26] 2024-02-27 00:20:04,897 | INFO     | pid: 4128731
[2024-02-26 19:20:26] 2024-02-27 00:20:04,897 | INFO     | pgrp: 4128731
[2024-02-26 19:20:26] 2024-02-27 00:20:04,897 | INFO     | corecount: 4
[2024-02-26 19:20:26] 2024-02-27 00:20:04,897 | INFO     | event service: False
[2024-02-26 19:20:26] 2024-02-27 00:20:04,897 | INFO     | sizes: {0: 2385810, 1: 2385952, 3: 2386158, 11: 2386186, 708: 2414951, 709: 2414951, 718: 2415301}
[2024-02-26 19:20:26] 2024-02-27 00:20:04,897 | INFO     | --------------------------------------------------
[2024-02-26 19:20:26] 2024-02-27 00:20:04,897 | INFO     | 
[2024-02-26 19:20:26] 2024-02-27 00:20:04,897 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/11
[2024-02-26 19:20:26] 2024-02-27 00:20:04,912 | INFO     | queue jobs had 0 job(s) [purged]
[2024-02-26 19:20:26] 2024-02-27 00:20:04,912 | INFO     | queue payloads had 0 job(s) [purged]
[2024-02-26 19:20:26] 2024-02-27 00:20:04,912 | INFO     | queue data_in had 0 job(s) [purged]
[2024-02-26 19:20:26] 2024-02-27 00:20:04,912 | INFO     | queue data_out had 0 job(s) [purged]
[2024-02-26 19:20:26] 2024-02-27 00:20:04,913 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-02-26 19:20:26] 2024-02-27 00:20:04,913 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-02-26 19:20:26] 2024-02-27 00:20:04,913 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-02-26 19:20:26] 2024-02-27 00:20:04,913 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-02-26 19:20:26] 2024-02-27 00:20:04,913 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-02-26 19:20:26] 2024-02-27 00:20:04,913 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-02-26 19:20:26] 2024-02-27 00:20:04,913 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-02-26 19:20:26] 2024-02-27 00:20:04,913 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-02-26 19:20:26] 2024-02-27 00:20:04,913 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-02-26 19:20:26] 2024-02-27 00:20:04,913 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-02-26 19:20:26] 2024-02-27 00:20:04,913 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-02-26 19:20:26] 2024-02-27 00:20:04,913 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-02-26 19:20:26] 2024-02-27 00:20:04,913 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-02-26 19:20:26] 2024-02-27 00:20:04,913 | INFO     | queue completed_jobids has 1 job(s)
[2024-02-26 19:20:26] 2024-02-27 00:20:04,913 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-02-26 19:20:26] 2024-02-27 00:20:04,914 | INFO     | queue messages had 0 job(s) [purged]
[2024-02-26 19:20:26] 2024-02-27 00:20:04,914 | INFO     | job 6127566225 has completed (purged errors)
[2024-02-26 19:20:26] 2024-02-27 00:20:04,914 | INFO     | overall cleanup function is called
[2024-02-26 19:20:26] 2024-02-27 00:20:05,920 | INFO     | --- collectZombieJob: --- 10, [4128731]
[2024-02-26 19:20:26] 2024-02-27 00:20:05,920 | INFO     | zombie collector waiting for pid 4128731
[2024-02-26 19:20:26] 2024-02-27 00:20:05,920 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-02-26 19:20:26] 2024-02-27 00:20:06,924 | INFO     | collected zombie processes
[2024-02-26 19:20:26] 2024-02-27 00:20:06,924 | INFO     | will now attempt to kill all subprocesses of pid=4128731
[2024-02-26 19:20:26] 2024-02-27 00:20:06,966 | INFO     | process IDs to be killed: [4128731] (in reverse order)
[2024-02-26 19:20:26] 2024-02-27 00:20:06,994 | WARNING  | found no corresponding commands to process id(s)
[2024-02-26 19:20:26] 2024-02-27 00:20:06,994 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-02-26 19:20:26] 2024-02-27 00:20:06,996 | INFO     | did not find any defunct processes belonging to 4128731
[2024-02-26 19:20:26] 2024-02-27 00:20:06,998 | INFO     | did not find any defunct processes belonging to 4128731
[2024-02-26 19:20:26] 2024-02-27 00:20:06,998 | INFO     | ready for new job
[2024-02-26 19:20:26] 2024-02-27 00:20:06,998 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-02-26 19:20:26] 2024-02-27 00:20:06,998 | INFO     | **************************************
[2024-02-26 19:20:26] 2024-02-27 00:20:06,998 | INFO     | ***  PanDA Pilot version 3.7.1.50  ***
[2024-02-26 19:20:26] 2024-02-27 00:20:06,998 | INFO     | **************************************
[2024-02-26 19:20:26] 2024-02-27 00:20:06,998 | INFO     | 
[2024-02-26 19:20:26] 2024-02-27 00:20:07,021 | INFO     | architecture information:
[2024-02-26 19:20:26] 2024-02-27 00:20:07,021 | INFO     | executing command: cat /etc/os-release
[2024-02-26 19:20:26] 2024-02-27 00:20:07,031 | INFO     | cat /etc/os-release:
[2024-02-26 19:20:26] NAME="CentOS Linux"
[2024-02-26 19:20:26] VERSION="7 (Core)"
[2024-02-26 19:20:26] ID="centos"
[2024-02-26 19:20:26] ID_LIKE="rhel fedora"
[2024-02-26 19:20:26] VERSION_ID="7"
[2024-02-26 19:20:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-02-26 19:20:26] ANSI_COLOR="0;31"
[2024-02-26 19:20:26] CPE_NAME="cpe:/o:centos:centos:7"
[2024-02-26 19:20:26] HOME_URL="https://www.centos.org/"
[2024-02-26 19:20:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-02-26 19:20:26] 
[2024-02-26 19:20:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-02-26 19:20:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-02-26 19:20:26] REDHAT_SUPPORT_PRODUCT="centos"
[2024-02-26 19:20:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-02-26 19:20:26] 
[2024-02-26 19:20:26] 2024-02-27 00:20:07,032 | INFO     | **************************************
[2024-02-26 19:20:26] 2024-02-27 00:20:07,532 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/11
[2024-02-26 19:20:26] 2024-02-27 00:20:07,545 | INFO     | sufficient remaining disk space (374314369024 B)
[2024-02-26 19:20:26] 2024-02-27 00:20:07,545 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-02-26 19:20:26] 2024-02-27 00:20:07,545 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-02-26 19:20:26] 2024-02-27 00:20:07,546 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-02-26 19:20:26] 2024-02-27 00:20:07,546 | INFO     | found 0 job(s) in 20 queues
[2024-02-26 19:20:26] 2024-02-27 00:20:07,546 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-02-26 19:20:26] 2024-02-27 00:20:07,546 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-02-26 19:20:26] 2024-02-27 00:20:07,788 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-02-26 19:20:26] 2024-02-27 00:20:08,144 | INFO     | all payload control threads have been joined
[2024-02-26 19:20:26] 2024-02-27 00:20:08,404 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-02-26 19:20:26] 2024-02-27 00:20:08,404 | INFO     | aborting loop
[2024-02-26 19:20:26] 2024-02-27 00:20:08,548 | INFO     | [job] retrieve thread has finished
[2024-02-26 19:20:26] 2024-02-27 00:20:08,557 | INFO     | all data control threads have been joined
[2024-02-26 19:20:26] 2024-02-27 00:20:08,587 | INFO     | [job] create_data_payload thread has finished
[2024-02-26 19:20:26] 2024-02-27 00:20:08,720 | INFO     | [payload] validate_pre thread has finished
[2024-02-26 19:20:26] 2024-02-27 00:20:08,745 | INFO     | [payload] failed_post thread has finished
[2024-02-26 19:20:26] 2024-02-27 00:20:08,908 | INFO     | [payload] execute_payloads thread has finished
[2024-02-26 19:20:26] 2024-02-27 00:20:09,148 | INFO     | [payload] control thread has finished
[2024-02-26 19:20:26] 2024-02-27 00:20:09,231 | INFO     | all job control threads have been joined
[2024-02-26 19:20:26] 2024-02-27 00:20:09,408 | INFO     | [job] job monitor thread has finished
[2024-02-26 19:20:26] 2024-02-27 00:20:09,562 | INFO     | [data] control thread has finished
[2024-02-26 19:20:26] 2024-02-27 00:20:09,793 | INFO     | [data] copytool_out thread has finished
[2024-02-26 19:20:26] 2024-02-27 00:20:09,874 | INFO     | [payload] validate_post thread has finished
[2024-02-26 19:20:26] 2024-02-27 00:20:09,904 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-02-26 19:20:26] 2024-02-27 00:20:09,910 | INFO     | [job] validate thread has finished
[2024-02-26 19:20:26] 2024-02-27 00:20:09,960 | INFO     | [data] copytool_in thread has finished
[2024-02-26 19:20:26] 2024-02-27 00:20:10,063 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-02-26 19:20:26] 2024-02-27 00:20:10,236 | INFO     | [job] control thread has finished
[2024-02-26 19:20:26] 2024-02-27 00:20:10,908 | INFO     | [job] queue monitor thread has finished
[2024-02-26 19:20:26] 2024-02-27 00:20:14,068 | INFO     | [data] queue_monitor thread has finished
[2024-02-26 19:20:26] 2024-02-27 00:20:18,539 | INFO     | job.realtimelogging is not enabled
[2024-02-26 19:20:26] 2024-02-27 00:20:19,544 | INFO     | [payload] run_realtimelog thread has finished
[2024-02-26 19:20:26] 2024-02-27 00:20:21,088 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140579372435264)>', '<ExcThread(monitor, started 140578943645440)>']
[2024-02-26 19:20:26] 2024-02-27 00:20:21,601 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-02-26 19:20:26] 2024-02-27 00:20:21,601 | INFO     | [monitor] control thread has ended
[2024-02-26 19:20:26] 2024-02-27 00:20:26,113 | INFO     | all workflow threads have been joined
[2024-02-26 19:20:26] 2024-02-27 00:20:26,113 | INFO     | end of generic workflow (traces error code: 0)
[2024-02-26 19:20:26] 2024-02-27 00:20:26,113 | INFO     | traces error code: 0
[2024-02-26 19:20:26] 2024-02-27 00:20:26,114 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-02-26 19:20:26] 2024-02-27 00:20:26,154 [wrapper] ==== pilot stdout END ====
[2024-02-26 19:20:26] 2024-02-27 00:20:26,157 [wrapper] ==== wrapper stdout RESUME ====
[2024-02-26 19:20:26] 2024-02-27 00:20:26,159 [wrapper] pilotpid: 4120945
[2024-02-26 19:20:26] 2024-02-27 00:20:26,162 [wrapper] Pilot exit status: 0
[2024-02-26 19:20:26] 2024-02-27 00:20:26,169 [wrapper] pandaids: 6127566225
[2024-02-26 19:20:26] 2024-02-27 00:20:26,186 [wrapper] cleanup: SIGTERM to supervisor_pilot 4120950 4120946
[2024-02-26 19:20:26] 2024-02-27 00:20:26,188 [wrapper] Test setup, not cleaning
[2024-02-26 19:20:26] 2024-02-27 00:20:26,191 [wrapper] ==== wrapper stdout END ====
[2024-02-26 19:20:26] 2024-02-27 00:20:26,194 [wrapper] ==== wrapper stderr END ====
[2024-02-26 19:20:26] 2024-02-27 00:20:26,199 [wrapper] apfmon messages muted
[2024-02-26 19:20:26]  *** Error codes and diagnostics ***
[2024-02-26 19:20:26]     "exeErrorCode": 0,
[2024-02-26 19:20:26]     "exeErrorDiag": "",
[2024-02-26 19:20:26]     "pilotErrorCode": 0,
[2024-02-26 19:20:26]     "pilotErrorDiag": "",
[2024-02-26 19:20:26]  *** Listing of results directory ***
[2024-02-26 19:20:26] total 44812
[2024-02-26 19:20:26] -rw-r--r-- 1 boinc boinc   460308 Feb 26 18:24 pilot3.tar.gz
[2024-02-26 19:20:26] -rwx------ 1 boinc boinc    32500 Feb 26 18:29 runpilot2-wrapper.sh
[2024-02-26 19:20:26] -rw-r--r-- 1 boinc boinc     4388 Feb 26 18:29 queuedata.json
[2024-02-26 19:20:26] -rw-r--r-- 1 boinc boinc      107 Feb 26 19:07 wrapper_26015_x86_64-pc-linux-gnu
[2024-02-26 19:20:26] -rwxr-xr-x 1 boinc boinc     7986 Feb 26 19:07 run_atlas
[2024-02-26 19:20:26] -rw-r--r-- 1 boinc boinc      112 Feb 26 19:07 job.xml
[2024-02-26 19:20:26] -rw-r--r-- 2 boinc boinc    17618 Feb 26 19:07 start_atlas.sh
[2024-02-26 19:20:26] drwxrwx--x 2 boinc boinc     4096 Feb 26 19:07 shared
[2024-02-26 19:20:26] -rw-r--r-- 2 boinc boinc   472026 Feb 26 19:07 input.tar.gz
[2024-02-26 19:20:26] -rw-r--r-- 1 boinc boinc     9364 Feb 26 19:07 init_data.xml
[2024-02-26 19:20:26] -rw-r--r-- 2 boinc boinc 38288972 Feb 26 19:07 EVNT.04972714._000032.pool.root.1
[2024-02-26 19:20:26] -rw-r--r-- 1 boinc boinc        0 Feb 26 19:07 boinc_lockfile
[2024-02-26 19:20:26] -rw-r--r-- 1 boinc boinc     2752 Feb 26 19:07 pandaJob.out
[2024-02-26 19:20:26] -rw------- 1 boinc boinc      424 Feb 26 19:07 setup.sh.local
[2024-02-26 19:20:26] -rw------- 1 boinc boinc   969743 Feb 26 19:07 agis_schedconf.cvmfs.json
[2024-02-26 19:20:26] -rw------- 1 boinc boinc        0 Feb 26 19:07 agis_ddmendpoints.agis.ALL.json
[2024-02-26 19:20:26] -rw------- 1 boinc boinc  1320368 Feb 26 19:07 cric_ddmendpoints.json
[2024-02-26 19:20:26] drwx------ 4 boinc boinc     4096 Feb 26 19:07 pilot3
[2024-02-26 19:20:26] -rw-r--r-- 1 boinc boinc      532 Feb 26 19:19 boinc_task_state.xml
[2024-02-26 19:20:26] -rw------- 1 boinc boinc  1793905 Feb 26 19:19 output.1.10740d48-4583-4910-972b-25c08b894b90_60830.pool.root
[2024-02-26 19:20:26] -rw------- 1 boinc boinc     1003 Feb 26 19:19 memory_monitor_summary.json
[2024-02-26 19:20:26] -rw------- 1 boinc boinc       95 Feb 26 19:19 pilot_heartbeat.json
[2024-02-26 19:20:26] -rw------- 1 boinc boinc   153705 Feb 26 19:19 10740d48-4583-4910-972b-25c08b894b90_60830.1.job.log.tgz
[2024-02-26 19:20:26] -rw------- 1 boinc boinc     6561 Feb 26 19:20 heartbeat.json
[2024-02-26 19:20:26] -rw-r--r-- 1 boinc boinc     8192 Feb 26 19:20 boinc_mmap_file
[2024-02-26 19:20:26] -rw-r--r-- 1 boinc boinc       24 Feb 26 19:20 wrapper_checkpoint.txt
[2024-02-26 19:20:26] -rw------- 1 boinc boinc     4419 Feb 26 19:20 pilotlog.txt
[2024-02-26 19:20:26] -rw------- 1 boinc boinc   121937 Feb 26 19:20 10740d48-4583-4910-972b-25c08b894b90_60830.1.job.log
[2024-02-26 19:20:26] -rw------- 1 boinc boinc      464 Feb 26 19:20 output.list
[2024-02-26 19:20:26] -rw-r--r-- 1 boinc boinc      748 Feb 26 19:20 runtime_log
[2024-02-26 19:20:26] -rw------- 1 boinc boinc  2088960 Feb 26 19:20 result.tar.gz
[2024-02-26 19:20:26] -rw-r--r-- 1 boinc boinc    12098 Feb 26 19:20 runtime_log.err
[2024-02-26 19:20:26] -rw------- 1 boinc boinc      623 Feb 26 19:20 kLAMDmZazy4n7Olcko1bjSoqABFKDmABFKDmyeZQDmBDLKDmL6A4sn.diag
[2024-02-26 19:20:26] -rw-r--r-- 1 boinc boinc    21324 Feb 26 19:20 stderr.txt
[2024-02-26 19:20:26] HITS file was successfully produced:
[2024-02-26 19:20:26] -rw------- 1 boinc boinc 1793905 Feb 26 19:19 shared/HITS.pool.root.1
[2024-02-26 19:20:26]  *** Contents of shared directory: ***
[2024-02-26 19:20:26] total 41672
[2024-02-26 19:20:26] -rw-r--r-- 2 boinc boinc    17618 Feb 26 19:07 start_atlas.sh
[2024-02-26 19:20:26] -rw-r--r-- 2 boinc boinc   472026 Feb 26 19:07 input.tar.gz
[2024-02-26 19:20:26] -rw-r--r-- 2 boinc boinc 38288972 Feb 26 19:07 ATLAS.root_0
[2024-02-26 19:20:26] -rw------- 1 boinc boinc  1793905 Feb 26 19:19 HITS.pool.root.1
[2024-02-26 19:20:26] -rw------- 1 boinc boinc  2088960 Feb 26 19:20 result.tar.gz
19:20:27 (4116550): run_atlas exited; CPU time 333.228141
19:20:27 (4116550): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN