Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
12:34:12 (286157): wrapper (7.7.26015): starting
12:34:12 (286157): wrapper: running run_atlas (--nthreads 4)
[2024-02-27 12:34:12] Arguments: --nthreads 4
[2024-02-27 12:34:12] Threads: 4
[2024-02-27 12:34:12] Checking for CVMFS
[2024-02-27 12:34:12] Probing /cvmfs/atlas.cern.ch... OK
[2024-02-27 12:34:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-02-27 12:34:12] Running cvmfs_config stat atlas.cern.ch
[2024-02-27 12:34:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-02-27 12:34:12] 2.9.2.0 267521 1 43312 129889 2 74 3965696 4194305 576 130560 0 50354 100.000 0 0 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2024-02-27 12:34:12] CVMFS is ok
[2024-02-27 12:34:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-02-27 12:34:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-02-27 12:34:12] Small home clusters do not require a local http proxy but it is suggested if
[2024-02-27 12:34:12] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-02-27 12:34:12] Further information can be found at the LHC@home message board.
[2024-02-27 12:34:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-02-27 12:34:12] Checking for apptainer binary...
[2024-02-27 12:34:12] apptainer is not installed, using version from CVMFS
[2024-02-27 12:34:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-02-27 12:34:12] WC5950
[2024-02-27 12:34:12] apptainer works
[2024-02-27 12:34:12] Set ATHENA_PROC_NUMBER=4
[2024-02-27 12:34:12] Set ATHENA_CORE_NUMBER=4
[2024-02-27 12:34:12] Starting ATLAS job with PandaID=6128604632
[2024-02-27 12:34:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-02-27 12:46:28]  *** The last 200 lines of the pilot log: ***
[2024-02-27 12:46:28] 2024-02-27 17:46:01,760 | INFO     | ready to transfer (stage-out) files: [ accessmode=
[2024-02-27 12:46:28]  activity=['pl', 'pw', 'w', 'default']
[2024-02-27 12:46:28]  allow_lan=True
[2024-02-27 12:46:28]  allow_wan=False
[2024-02-27 12:46:28]  checkinputsize=True
[2024-02-27 12:46:28]  checksum={'adler32': 'b7915b1d'}
[2024-02-27 12:46:28]  dataset=hc_test.gangarbt.hc20286841.tid1184.BOINC-TEST.23
[2024-02-27 12:46:28]  ddm_activity=['write_lan', 'write_wan']
[2024-02-27 12:46:28]  ddmendpoint=NDGF-T1_DATADISK
[2024-02-27 12:46:28]  direct_access_lan=False
[2024-02-27 12:46:28]  direct_access_wan=False
[2024-02-27 12:46:28]  domain=
[2024-02-27 12:46:28]  filesize=153826
[2024-02-27 12:46:28]  filetype=log
[2024-02-27 12:46:28]  guid=b4d20e4c-7e29-4234-ae7b-5616195a2229
[2024-02-27 12:46:28]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-02-27 12:46:28]  is_tar=False
[2024-02-27 12:46:28]  lfn=7f87a427-7e13-42dd-82aa-8a4f2b1a05ca_17237.1.job.log.tgz
[2024-02-27 12:46:28]  mtime=0
[2024-02-27 12:46:28]  protocol_id=None
[2024-02-27 12:46:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-02-27 12:46:28]  replicas=None
[2024-02-27 12:46:28]  scope=hc_test
[2024-02-27 12:46:28]  status=None
[2024-02-27 12:46:28]  status_code=0
[2024-02-27 12:46:28]  storage_token=
[2024-02-27 12:46:28]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6128604632/7f87a427-7e13-42dd-82aa-8a4f2b1a05ca_17237.1.job.log.tgz
[2024-02-27 12:46:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/9e/a0/7f87a427-7e13-42dd-82aa-8a4f2b1a05ca_17237.1.job.log.tgz
[2024-02-27 12:46:28]  workdir=None
[2024-02-27 12:46:28] ]
[2024-02-27 12:46:28] 2024-02-27 17:46:01,777 | INFO     | transferring file 7f87a427-7e13-42dd-82aa-8a4f2b1a05ca_17237.1.job.log.tgz from /var/lib/boinc-client/slots/0/PanDA_Pilot-6128604632/7f87a427-7e13-42dd-82aa-8a4f2b
[2024-02-27 12:46:28] 2024-02-27 17:46:01,777 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6128604632/7f87a427-7e13-42dd-82aa-8a4f2b1a05ca_17237.1.job.log.tgz /var/lib/boinc-cli
[2024-02-27 12:46:28] 2024-02-27 17:46:01,789 | INFO     | adding to output.list: 7f87a427-7e13-42dd-82aa-8a4f2b1a05ca_17237.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/9e/a0/7f87a427-7e13-
[2024-02-27 12:46:28] 2024-02-27 17:46:01,790 | INFO     | summary of transferred files:
[2024-02-27 12:46:28] 2024-02-27 17:46:01,790 | INFO     |  -- lfn=7f87a427-7e13-42dd-82aa-8a4f2b1a05ca_17237.1.job.log.tgz, status_code=0, status=transferred
[2024-02-27 12:46:28] 2024-02-27 17:46:01,790 | INFO     | stage-out finished correctly
[2024-02-27 12:46:28] 2024-02-27 17:46:03,723 | INFO     | monitor loop #61: job 0:6128604632 is in state 'finished'
[2024-02-27 12:46:28] 2024-02-27 17:46:03,723 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-27 12:46:28] 2024-02-27 17:46:03,734 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-02-27 12:46:28] 2024-02-27 17:46:06,224 | INFO     | monitor loop #62: job 0:6128604632 is in state 'finished'
[2024-02-27 12:46:28] 2024-02-27 17:46:06,224 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-27 12:46:28] 2024-02-27 17:46:06,504 | INFO     | job 6128604632 has state=finished
[2024-02-27 12:46:28] 2024-02-27 17:46:06,504 | INFO     | preparing for final server update for job 6128604632 in state='finished'
[2024-02-27 12:46:28] 2024-02-27 17:46:06,504 | INFO     | this job has now completed (state=finished)
[2024-02-27 12:46:28] 2024-02-27 17:46:06,504 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-02-27 12:46:28] 2024-02-27 17:46:06,504 | INFO     | job 6128604632 has finished - writing final server update
[2024-02-27 12:46:28] 2024-02-27 17:46:06,505 | INFO     | total number of processed events: 2 (read)
[2024-02-27 12:46:28] 2024-02-27 17:46:06,525 | INFO     | executing command: lscpu
[2024-02-27 12:46:28] 2024-02-27 17:46:06,557 | INFO     | found 16 cores (16 cores per socket, 1 sockets)
[2024-02-27 12:46:28] 2024-02-27 17:46:06,558 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-02-27 12:46:28] 2024-02-27 17:46:06,597 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-02-27 12:46:28] 2024-02-27 17:46:08,727 | INFO     | monitor loop #63: job 0:6128604632 is in state 'finished'
[2024-02-27 12:46:28] 2024-02-27 17:46:08,727 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-27 12:46:28] 2024-02-27 17:46:08,859 | INFO     | CPU arch script returned: x86-64-v3
[2024-02-27 12:46:28] 2024-02-27 17:46:08,859 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6128604632/memory_monitor_summary.json (trf name=prmon)
[2024-02-27 12:46:28] 2024-02-27 17:46:08,859 | INFO     | extracted standard info from prmon json
[2024-02-27 12:46:28] 2024-02-27 17:46:08,859 | INFO     | extracted standard memory fields from prmon json
[2024-02-27 12:46:28] 2024-02-27 17:46:08,860 | WARNING  | wrong length of table data, x=[1709055586.0, 1709055647.0, 1709055708.0, 1709055769.0, 1709055830.0], y=[869441.0, 959846.0, 1092194.0, 1603773.0, 1659748.0] (must
[2024-02-27 12:46:28] 2024-02-27 17:46:08,860 | INFO     | ..............................
[2024-02-27 12:46:28] 2024-02-27 17:46:08,860 | INFO     | . Timing measurements:
[2024-02-27 12:46:28] 2024-02-27 17:46:08,860 | INFO     | . get job = 0 s
[2024-02-27 12:46:28] 2024-02-27 17:46:08,860 | INFO     | . initial setup = 1 s
[2024-02-27 12:46:28] 2024-02-27 17:46:08,860 | INFO     | . payload setup = 4 s
[2024-02-27 12:46:28] 2024-02-27 17:46:08,860 | INFO     | . stage-in = 0 s
[2024-02-27 12:46:28] 2024-02-27 17:46:08,860 | INFO     | . payload execution = 681 s
[2024-02-27 12:46:28] 2024-02-27 17:46:08,860 | INFO     | . stage-out = 0 s
[2024-02-27 12:46:28] 2024-02-27 17:46:08,860 | INFO     | . log creation = 0 s
[2024-02-27 12:46:28] 2024-02-27 17:46:08,860 | INFO     | ..............................
[2024-02-27 12:46:28] 2024-02-27 17:46:08,896 | INFO     | 
[2024-02-27 12:46:28] 2024-02-27 17:46:08,896 | INFO     | job summary report
[2024-02-27 12:46:28] 2024-02-27 17:46:08,896 | INFO     | --------------------------------------------------
[2024-02-27 12:46:28] 2024-02-27 17:46:08,896 | INFO     | PanDA job id: 6128604632
[2024-02-27 12:46:28] 2024-02-27 17:46:08,896 | INFO     | task id: NULL
[2024-02-27 12:46:28] 2024-02-27 17:46:08,896 | INFO     | errors: (none)
[2024-02-27 12:46:28] 2024-02-27 17:46:08,897 | INFO     | status: LOG_TRANSFER = DONE 
[2024-02-27 12:46:28] 2024-02-27 17:46:08,897 | INFO     | pilot state: finished 
[2024-02-27 12:46:28] 2024-02-27 17:46:08,897 | INFO     | transexitcode: 0
[2024-02-27 12:46:28] 2024-02-27 17:46:08,897 | INFO     | exeerrorcode: 0
[2024-02-27 12:46:28] 2024-02-27 17:46:08,897 | INFO     | exeerrordiag: 
[2024-02-27 12:46:28] 2024-02-27 17:46:08,897 | INFO     | exitcode: 0
[2024-02-27 12:46:28] 2024-02-27 17:46:08,897 | INFO     | exitmsg: OK
[2024-02-27 12:46:28] 2024-02-27 17:46:08,897 | INFO     | cpuconsumptiontime: 297 s
[2024-02-27 12:46:28] 2024-02-27 17:46:08,897 | INFO     | nevents: 2
[2024-02-27 12:46:28] 2024-02-27 17:46:08,897 | INFO     | neventsw: 0
[2024-02-27 12:46:28] 2024-02-27 17:46:08,897 | INFO     | pid: 297163
[2024-02-27 12:46:28] 2024-02-27 17:46:08,897 | INFO     | pgrp: 297163
[2024-02-27 12:46:28] 2024-02-27 17:46:08,897 | INFO     | corecount: 4
[2024-02-27 12:46:28] 2024-02-27 17:46:08,897 | INFO     | event service: False
[2024-02-27 12:46:28] 2024-02-27 17:46:08,897 | INFO     | sizes: {0: 2385923, 3: 2386129, 11: 2386157, 689: 2415058, 691: 2415058, 696: 2415280}
[2024-02-27 12:46:28] 2024-02-27 17:46:08,897 | INFO     | --------------------------------------------------
[2024-02-27 12:46:28] 2024-02-27 17:46:08,897 | INFO     | 
[2024-02-27 12:46:28] 2024-02-27 17:46:08,897 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2024-02-27 12:46:28] 2024-02-27 17:46:08,910 | INFO     | queue jobs had 0 job(s) [purged]
[2024-02-27 12:46:28] 2024-02-27 17:46:08,910 | INFO     | queue payloads had 0 job(s) [purged]
[2024-02-27 12:46:28] 2024-02-27 17:46:08,910 | INFO     | queue data_in had 0 job(s) [purged]
[2024-02-27 12:46:28] 2024-02-27 17:46:08,910 | INFO     | queue data_out had 0 job(s) [purged]
[2024-02-27 12:46:28] 2024-02-27 17:46:08,910 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-02-27 12:46:28] 2024-02-27 17:46:08,910 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-02-27 12:46:28] 2024-02-27 17:46:08,910 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-02-27 12:46:28] 2024-02-27 17:46:08,910 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-02-27 12:46:28] 2024-02-27 17:46:08,910 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-02-27 12:46:28] 2024-02-27 17:46:08,910 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-02-27 12:46:28] 2024-02-27 17:46:08,910 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-02-27 12:46:28] 2024-02-27 17:46:08,910 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-02-27 12:46:28] 2024-02-27 17:46:08,910 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-02-27 12:46:28] 2024-02-27 17:46:08,910 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-02-27 12:46:28] 2024-02-27 17:46:08,910 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-02-27 12:46:28] 2024-02-27 17:46:08,910 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-02-27 12:46:28] 2024-02-27 17:46:08,910 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-02-27 12:46:28] 2024-02-27 17:46:08,910 | INFO     | queue completed_jobids has 1 job(s)
[2024-02-27 12:46:28] 2024-02-27 17:46:08,910 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-02-27 12:46:28] 2024-02-27 17:46:08,910 | INFO     | queue messages had 0 job(s) [purged]
[2024-02-27 12:46:28] 2024-02-27 17:46:08,911 | INFO     | job 6128604632 has completed (purged errors)
[2024-02-27 12:46:28] 2024-02-27 17:46:08,911 | INFO     | overall cleanup function is called
[2024-02-27 12:46:28] 2024-02-27 17:46:09,916 | INFO     | --- collectZombieJob: --- 10, [297163]
[2024-02-27 12:46:28] 2024-02-27 17:46:09,916 | INFO     | zombie collector waiting for pid 297163
[2024-02-27 12:46:28] 2024-02-27 17:46:09,916 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-02-27 12:46:28] 2024-02-27 17:46:10,921 | INFO     | collected zombie processes
[2024-02-27 12:46:28] 2024-02-27 17:46:10,921 | INFO     | will now attempt to kill all subprocesses of pid=297163
[2024-02-27 12:46:28] 2024-02-27 17:46:10,960 | INFO     | process IDs to be killed: [297163] (in reverse order)
[2024-02-27 12:46:28] 2024-02-27 17:46:10,986 | WARNING  | found no corresponding commands to process id(s)
[2024-02-27 12:46:28] 2024-02-27 17:46:10,986 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-02-27 12:46:28] 2024-02-27 17:46:10,988 | INFO     | did not find any defunct processes belonging to 297163
[2024-02-27 12:46:28] 2024-02-27 17:46:10,989 | INFO     | did not find any defunct processes belonging to 297163
[2024-02-27 12:46:28] 2024-02-27 17:46:10,989 | INFO     | ready for new job
[2024-02-27 12:46:28] 2024-02-27 17:46:10,989 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-02-27 12:46:28] 2024-02-27 17:46:10,990 | INFO     | **************************************
[2024-02-27 12:46:28] 2024-02-27 17:46:10,990 | INFO     | ***  PanDA Pilot version 3.7.1.50  ***
[2024-02-27 12:46:28] 2024-02-27 17:46:10,990 | INFO     | **************************************
[2024-02-27 12:46:28] 2024-02-27 17:46:10,990 | INFO     | 
[2024-02-27 12:46:28] 2024-02-27 17:46:11,009 | INFO     | architecture information:
[2024-02-27 12:46:28] 2024-02-27 17:46:11,009 | INFO     | executing command: cat /etc/os-release
[2024-02-27 12:46:28] 2024-02-27 17:46:11,017 | INFO     | cat /etc/os-release:
[2024-02-27 12:46:28] NAME="CentOS Linux"
[2024-02-27 12:46:28] VERSION="7 (Core)"
[2024-02-27 12:46:28] ID="centos"
[2024-02-27 12:46:28] ID_LIKE="rhel fedora"
[2024-02-27 12:46:28] VERSION_ID="7"
[2024-02-27 12:46:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-02-27 12:46:28] ANSI_COLOR="0;31"
[2024-02-27 12:46:28] CPE_NAME="cpe:/o:centos:centos:7"
[2024-02-27 12:46:28] HOME_URL="https://www.centos.org/"
[2024-02-27 12:46:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-02-27 12:46:28] 
[2024-02-27 12:46:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-02-27 12:46:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-02-27 12:46:28] REDHAT_SUPPORT_PRODUCT="centos"
[2024-02-27 12:46:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-02-27 12:46:28] 
[2024-02-27 12:46:28] 2024-02-27 17:46:11,017 | INFO     | **************************************
[2024-02-27 12:46:28] 2024-02-27 17:46:11,520 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2024-02-27 12:46:28] 2024-02-27 17:46:11,530 | INFO     | sufficient remaining disk space (374257745920 B)
[2024-02-27 12:46:28] 2024-02-27 17:46:11,531 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-02-27 12:46:28] 2024-02-27 17:46:11,531 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-02-27 12:46:28] 2024-02-27 17:46:11,531 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-02-27 12:46:28] 2024-02-27 17:46:11,531 | INFO     | found 0 job(s) in 20 queues
[2024-02-27 12:46:28] 2024-02-27 17:46:11,531 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-02-27 12:46:28] 2024-02-27 17:46:11,531 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-02-27 12:46:28] 2024-02-27 17:46:12,006 | INFO     | all job control threads have been joined
[2024-02-27 12:46:28] 2024-02-27 17:46:12,084 | INFO     | all data control threads have been joined
[2024-02-27 12:46:28] 2024-02-27 17:46:12,234 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-02-27 12:46:28] 2024-02-27 17:46:12,234 | INFO     | aborting loop
[2024-02-27 12:46:28] 2024-02-27 17:46:12,278 | INFO     | all payload control threads have been joined
[2024-02-27 12:46:28] 2024-02-27 17:46:12,338 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-02-27 12:46:28] 2024-02-27 17:46:12,536 | INFO     | [job] retrieve thread has finished
[2024-02-27 12:46:28] 2024-02-27 17:46:12,612 | INFO     | [job] validate thread has finished
[2024-02-27 12:46:28] 2024-02-27 17:46:12,684 | INFO     | [job] create_data_payload thread has finished
[2024-02-27 12:46:28] 2024-02-27 17:46:12,754 | INFO     | [payload] validate_pre thread has finished
[2024-02-27 12:46:28] 2024-02-27 17:46:13,010 | INFO     | [payload] execute_payloads thread has finished
[2024-02-27 12:46:28] 2024-02-27 17:46:13,012 | INFO     | [job] control thread has finished
[2024-02-27 12:46:28] 2024-02-27 17:46:13,032 | INFO     | [payload] failed_post thread has finished
[2024-02-27 12:46:28] 2024-02-27 17:46:13,088 | INFO     | [data] control thread has finished
[2024-02-27 12:46:28] 2024-02-27 17:46:13,239 | INFO     | [job] job monitor thread has finished
[2024-02-27 12:46:28] 2024-02-27 17:46:13,283 | INFO     | [payload] control thread has finished
[2024-02-27 12:46:28] 2024-02-27 17:46:13,764 | INFO     | [payload] validate_post thread has finished
[2024-02-27 12:46:28] 2024-02-27 17:46:13,800 | INFO     | [data] copytool_in thread has finished
[2024-02-27 12:46:28] 2024-02-27 17:46:13,904 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-02-27 12:46:28] 2024-02-27 17:46:14,276 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-02-27 12:46:28] 2024-02-27 17:46:14,343 | INFO     | [data] copytool_out thread has finished
[2024-02-27 12:46:28] 2024-02-27 17:46:14,909 | INFO     | [job] queue monitor thread has finished
[2024-02-27 12:46:28] 2024-02-27 17:46:18,280 | INFO     | [data] queue_monitor thread has finished
[2024-02-27 12:46:28] 2024-02-27 17:46:21,968 | INFO     | job.realtimelogging is not enabled
[2024-02-27 12:46:28] 2024-02-27 17:46:22,972 | INFO     | [payload] run_realtimelog thread has finished
[2024-02-27 12:46:28] 2024-02-27 17:46:23,828 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140464356886336)>', '<ExcThread(monitor, started 140463793227520)>']
[2024-02-27 12:46:28] 2024-02-27 17:46:24,589 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-02-27 12:46:28] 2024-02-27 17:46:24,589 | INFO     | [monitor] control thread has ended
[2024-02-27 12:46:28] 2024-02-27 17:46:28,852 | INFO     | all workflow threads have been joined
[2024-02-27 12:46:28] 2024-02-27 17:46:28,852 | INFO     | end of generic workflow (traces error code: 0)
[2024-02-27 12:46:28] 2024-02-27 17:46:28,852 | INFO     | traces error code: 0
[2024-02-27 12:46:28] 2024-02-27 17:46:28,852 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-02-27 12:46:28] 2024-02-27 17:46:28,883 [wrapper] ==== pilot stdout END ====
[2024-02-27 12:46:28] 2024-02-27 17:46:28,885 [wrapper] ==== wrapper stdout RESUME ====
[2024-02-27 12:46:28] 2024-02-27 17:46:28,889 [wrapper] pilotpid: 289916
[2024-02-27 12:46:28] 2024-02-27 17:46:28,891 [wrapper] Pilot exit status: 0
[2024-02-27 12:46:28] 2024-02-27 17:46:28,898 [wrapper] pandaids: 6128604632
[2024-02-27 12:46:28] 2024-02-27 17:46:28,921 [wrapper] cleanup: SIGTERM to supervisor_pilot  289921 289917
[2024-02-27 12:46:28] 2024-02-27 17:46:28,923 [wrapper] Test setup, not cleaning
[2024-02-27 12:46:28] 2024-02-27 17:46:28,926 [wrapper] ==== wrapper stdout END ====
[2024-02-27 12:46:28] 2024-02-27 17:46:28,928 [wrapper] ==== wrapper stderr END ====
[2024-02-27 12:46:28] 2024-02-27 17:46:28,932 [wrapper] apfmon messages muted
[2024-02-27 12:46:28]  *** Error codes and diagnostics ***
[2024-02-27 12:46:28]     "exeErrorCode": 0,
[2024-02-27 12:46:28]     "exeErrorDiag": "",
[2024-02-27 12:46:28]     "pilotErrorCode": 0,
[2024-02-27 12:46:28]     "pilotErrorDiag": "",
[2024-02-27 12:46:28]  *** Listing of results directory ***
[2024-02-27 12:46:28] total 44492
[2024-02-27 12:46:28] -rw-r--r-- 1 boinc boinc   460308 Feb 27 10:55 pilot3.tar.gz
[2024-02-27 12:46:28] -rwx------ 1 boinc boinc    32522 Feb 27 11:11 runpilot2-wrapper.sh
[2024-02-27 12:46:28] -rw-r--r-- 1 boinc boinc     4388 Feb 27 11:11 queuedata.json
[2024-02-27 12:46:28] -rw-r--r-- 1 boinc boinc      107 Feb 27 12:34 wrapper_26015_x86_64-pc-linux-gnu
[2024-02-27 12:46:28] -rwxr-xr-x 1 boinc boinc     7986 Feb 27 12:34 run_atlas
[2024-02-27 12:46:28] -rw-r--r-- 1 boinc boinc      112 Feb 27 12:34 job.xml
[2024-02-27 12:46:28] -rw-r--r-- 2 boinc boinc    17618 Feb 27 12:34 start_atlas.sh
[2024-02-27 12:46:28] drwxrwx--x 2 boinc boinc     4096 Feb 27 12:34 shared
[2024-02-27 12:46:28] -rw-r--r-- 2 boinc boinc   472049 Feb 27 12:34 input.tar.gz
[2024-02-27 12:46:28] -rw-r--r-- 1 boinc boinc     9363 Feb 27 12:34 init_data.xml
[2024-02-27 12:46:28] -rw-r--r-- 2 boinc boinc 37965264 Feb 27 12:34 EVNT.04972714._000027.pool.root.1
[2024-02-27 12:46:28] -rw-r--r-- 1 boinc boinc        0 Feb 27 12:34 boinc_lockfile
[2024-02-27 12:46:28] -rw-r--r-- 1 boinc boinc     2752 Feb 27 12:34 pandaJob.out
[2024-02-27 12:46:28] -rw------- 1 boinc boinc      424 Feb 27 12:34 setup.sh.local
[2024-02-27 12:46:28] -rw------- 1 boinc boinc   969729 Feb 27 12:34 agis_schedconf.cvmfs.json
[2024-02-27 12:46:28] -rw------- 1 boinc boinc        0 Feb 27 12:34 agis_ddmendpoints.agis.ALL.json
[2024-02-27 12:46:28] -rw------- 1 boinc boinc  1320368 Feb 27 12:34 cric_ddmendpoints.json
[2024-02-27 12:46:28] drwx------ 4 boinc boinc     4096 Feb 27 12:34 pilot3
[2024-02-27 12:46:28] -rw------- 1 boinc boinc       95 Feb 27 12:45 pilot_heartbeat.json
[2024-02-27 12:46:28] -rw------- 1 boinc boinc  1794002 Feb 27 12:45 output.1.7f87a427-7e13-42dd-82aa-8a4f2b1a05ca_17237.pool.root
[2024-02-27 12:46:28] -rw-r--r-- 1 boinc boinc      532 Feb 27 12:45 boinc_task_state.xml
[2024-02-27 12:46:28] -rw------- 1 boinc boinc      999 Feb 27 12:45 memory_monitor_summary.json
[2024-02-27 12:46:28] -rw------- 1 boinc boinc   153826 Feb 27 12:46 7f87a427-7e13-42dd-82aa-8a4f2b1a05ca_17237.1.job.log.tgz
[2024-02-27 12:46:28] -rw------- 1 boinc boinc     6605 Feb 27 12:46 heartbeat.json
[2024-02-27 12:46:28] -rw-r--r-- 1 boinc boinc     8192 Feb 27 12:46 boinc_mmap_file
[2024-02-27 12:46:28] -rw-r--r-- 1 boinc boinc       24 Feb 27 12:46 wrapper_checkpoint.txt
[2024-02-27 12:46:28] -rw------- 1 boinc boinc     4418 Feb 27 12:46 pilotlog.txt
[2024-02-27 12:46:28] -rw------- 1 boinc boinc   120601 Feb 27 12:46 7f87a427-7e13-42dd-82aa-8a4f2b1a05ca_17237.1.job.log
[2024-02-27 12:46:28] -rw------- 1 boinc boinc      464 Feb 27 12:46 output.list
[2024-02-27 12:46:28] -rw-r--r-- 1 boinc boinc      748 Feb 27 12:46 runtime_log
[2024-02-27 12:46:28] -rw------- 1 boinc boinc  2088960 Feb 27 12:46 result.tar.gz
[2024-02-27 12:46:28] -rw------- 1 boinc boinc      623 Feb 27 12:46 VbAMDmWEFz4n7Olcko1bjSoqABFKDmABFKDmyeZQDmqELKDmpqqN6n.diag
[2024-02-27 12:46:28] -rw-r--r-- 1 boinc boinc    12080 Feb 27 12:46 runtime_log.err
[2024-02-27 12:46:28] -rw-r--r-- 1 boinc boinc    21158 Feb 27 12:46 stderr.txt
[2024-02-27 12:46:28] HITS file was successfully produced:
[2024-02-27 12:46:28] -rw------- 1 boinc boinc 1794002 Feb 27 12:45 shared/HITS.pool.root.1
[2024-02-27 12:46:28]  *** Contents of shared directory: ***
[2024-02-27 12:46:28] total 41352
[2024-02-27 12:46:28] -rw-r--r-- 2 boinc boinc    17618 Feb 27 12:34 start_atlas.sh
[2024-02-27 12:46:28] -rw-r--r-- 2 boinc boinc   472049 Feb 27 12:34 input.tar.gz
[2024-02-27 12:46:28] -rw-r--r-- 2 boinc boinc 37965264 Feb 27 12:34 ATLAS.root_0
[2024-02-27 12:46:28] -rw------- 1 boinc boinc  1794002 Feb 27 12:45 HITS.pool.root.1
[2024-02-27 12:46:28] -rw------- 1 boinc boinc  2088960 Feb 27 12:46 result.tar.gz
12:46:30 (286157): run_atlas exited; CPU time 295.058198
12:46:30 (286157): called boinc_finish(0)

</stderr_txt>
]]>

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