Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
20:02:00 (671390): wrapper (7.7.26015): starting
20:02:00 (671390): wrapper: running run_atlas (--nthreads 4)
[2024-02-28 20:02:00] Arguments: --nthreads 4
[2024-02-28 20:02:00] Threads: 4
[2024-02-28 20:02:00] Checking for CVMFS
[2024-02-28 20:02:00] Probing /cvmfs/atlas.cern.ch... OK
[2024-02-28 20:02:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-02-28 20:02:00] Running cvmfs_config stat atlas.cern.ch
[2024-02-28 20:02:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-02-28 20:02:00] 2.9.2.0 649396 11 39936 129947 0 75 2367260 4194304 0 130560 0 60894 99.974 1147 318 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2024-02-28 20:02:00] CVMFS is ok
[2024-02-28 20:02:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-02-28 20:02:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-02-28 20:02:00] Small home clusters do not require a local http proxy but it is suggested if
[2024-02-28 20:02:00] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-02-28 20:02:00] Further information can be found at the LHC@home message board.
[2024-02-28 20:02:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-02-28 20:02:00] Checking for apptainer binary...
[2024-02-28 20:02:00] apptainer is not installed, using version from CVMFS
[2024-02-28 20:02:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-02-28 20:02:01] WC5950
[2024-02-28 20:02:01] apptainer works
[2024-02-28 20:02:01] Set ATHENA_PROC_NUMBER=4
[2024-02-28 20:02:01] Set ATHENA_CORE_NUMBER=4
[2024-02-28 20:02:01] Starting ATLAS job with PandaID=6130392309
[2024-02-28 20:02:01] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-02-28 20:12:33]  *** The last 200 lines of the pilot log: ***
[2024-02-28 20:12:33]  allow_lan=True
[2024-02-28 20:12:33]  allow_wan=False
[2024-02-28 20:12:33]  checkinputsize=True
[2024-02-28 20:12:33]  checksum={'adler32': '49cd5e9e'}
[2024-02-28 20:12:33]  dataset=hc_test.gangarbt.hc20286937.tid1231.BOINC-TEST.158
[2024-02-28 20:12:33]  ddm_activity=['write_lan', 'write_wan']
[2024-02-28 20:12:33]  ddmendpoint=NDGF-T1_DATADISK
[2024-02-28 20:12:33]  direct_access_lan=False
[2024-02-28 20:12:33]  direct_access_wan=False
[2024-02-28 20:12:33]  domain=
[2024-02-28 20:12:33]  filesize=153816
[2024-02-28 20:12:33]  filetype=log
[2024-02-28 20:12:33]  guid=be29f96d-f7b7-46b7-8bff-8beaef38497c
[2024-02-28 20:12:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2024-02-28 20:12:33]  is_tar=False
[2024-02-28 20:12:33]  lfn=f18e63d5-fdfa-4cd0-b6c7-c9392faab7c4_73186.1.job.log.tgz
[2024-02-28 20:12:33]  mtime=0
[2024-02-28 20:12:33]  protocol_id=None
[2024-02-28 20:12:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2024-02-28 20:12:33]  replicas=None
[2024-02-28 20:12:33]  scope=hc_test
[2024-02-28 20:12:33]  status=None
[2024-02-28 20:12:33]  status_code=0
[2024-02-28 20:12:33]  storage_token=
[2024-02-28 20:12:33]  surl=/var/lib/boinc-client/slots/5/PanDA_Pilot-6130392309/f18e63d5-fdfa-4cd0-b6c7-c9392faab7c4_73186.1.job.log.tgz
[2024-02-28 20:12:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/17/3b/f18e63d5-fdfa-4cd0-b6c7-c9392faab7c4_73186.1.job.log.tgz
[2024-02-28 20:12:33]  workdir=None
[2024-02-28 20:12:33] ]
[2024-02-28 20:12:33] 2024-02-29 01:12:01,280 | INFO     | transferring file f18e63d5-fdfa-4cd0-b6c7-c9392faab7c4_73186.1.job.log.tgz from /var/lib/boinc-client/slots/5/PanDA_Pilot-6130392309/f18e63d5-fdfa-4cd0-b6c7-c9392f
[2024-02-28 20:12:33] 2024-02-29 01:12:01,280 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/5/PanDA_Pilot-6130392309/f18e63d5-fdfa-4cd0-b6c7-c9392faab7c4_73186.1.job.log.tgz /var/lib/boinc-cli
[2024-02-28 20:12:33] 2024-02-29 01:12:01,292 | INFO     | adding to output.list: f18e63d5-fdfa-4cd0-b6c7-c9392faab7c4_73186.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/17/3b/f18e63d5-fdfa-
[2024-02-28 20:12:33] 2024-02-29 01:12:01,292 | INFO     | summary of transferred files:
[2024-02-28 20:12:33] 2024-02-29 01:12:01,293 | INFO     |  -- lfn=f18e63d5-fdfa-4cd0-b6c7-c9392faab7c4_73186.1.job.log.tgz, status_code=0, status=transferred
[2024-02-28 20:12:33] 2024-02-29 01:12:01,293 | INFO     | stage-out finished correctly
[2024-02-28 20:12:33] 2024-02-29 01:12:02,996 | INFO     | monitor loop #52: job 0:6130392309 is in state 'finished'
[2024-02-28 20:12:33] 2024-02-29 01:12:02,996 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-28 20:12:33] 2024-02-29 01:12:03,822 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-02-28 20:12:33] 2024-02-29 01:12:03,863 | INFO     | job 6130392309 has state=finished
[2024-02-28 20:12:33] 2024-02-29 01:12:03,863 | INFO     | preparing for final server update for job 6130392309 in state='finished'
[2024-02-28 20:12:33] 2024-02-29 01:12:03,863 | INFO     | this job has now completed (state=finished)
[2024-02-28 20:12:33] 2024-02-29 01:12:03,863 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-02-28 20:12:33] 2024-02-29 01:12:03,863 | INFO     | job 6130392309 has finished - writing final server update
[2024-02-28 20:12:33] 2024-02-29 01:12:03,863 | INFO     | total number of processed events: 2 (read)
[2024-02-28 20:12:33] 2024-02-29 01:12:03,881 | INFO     | executing command: lscpu
[2024-02-28 20:12:33] 2024-02-29 01:12:03,919 | INFO     | found 16 cores (16 cores per socket, 1 sockets)
[2024-02-28 20:12:33] 2024-02-29 01:12:03,919 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-02-28 20:12:33] 2024-02-29 01:12:03,962 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-02-28 20:12:33] 2024-02-29 01:12:05,499 | INFO     | monitor loop #53: job 0:6130392309 is in state 'finished'
[2024-02-28 20:12:33] 2024-02-29 01:12:05,499 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-28 20:12:33] 2024-02-29 01:12:08,001 | INFO     | monitor loop #54: job 0:6130392309 is in state 'finished'
[2024-02-28 20:12:33] 2024-02-29 01:12:08,001 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-28 20:12:33] 2024-02-29 01:12:10,505 | INFO     | monitor loop #55: job 0:6130392309 is in state 'finished'
[2024-02-28 20:12:33] 2024-02-29 01:12:10,505 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-28 20:12:33] 2024-02-29 01:12:11,058 | INFO     | CPU arch script returned: x86-64-v3
[2024-02-28 20:12:33] 2024-02-29 01:12:11,059 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6130392309/memory_monitor_summary.json (trf name=prmon)
[2024-02-28 20:12:33] 2024-02-29 01:12:11,059 | INFO     | extracted standard info from prmon json
[2024-02-28 20:12:33] 2024-02-29 01:12:11,059 | INFO     | extracted standard memory fields from prmon json
[2024-02-28 20:12:33] 2024-02-29 01:12:11,060 | WARNING  | wrong length of table data, x=[1709168859.0, 1709168920.0, 1709168981.0], y=[1029279.0, 1145775.0, 1642510.0] (must be same and length>=4)
[2024-02-28 20:12:33] 2024-02-29 01:12:11,060 | INFO     | ..............................
[2024-02-28 20:12:33] 2024-02-29 01:12:11,060 | INFO     | . Timing measurements:
[2024-02-28 20:12:33] 2024-02-29 01:12:11,061 | INFO     | . get job = 0 s
[2024-02-28 20:12:33] 2024-02-29 01:12:11,061 | INFO     | . initial setup = 6 s
[2024-02-28 20:12:33] 2024-02-29 01:12:11,061 | INFO     | . payload setup = 4 s
[2024-02-28 20:12:33] 2024-02-29 01:12:11,061 | INFO     | . stage-in = 0 s
[2024-02-28 20:12:33] 2024-02-29 01:12:11,061 | INFO     | . payload execution = 567 s
[2024-02-28 20:12:33] 2024-02-29 01:12:11,061 | INFO     | . stage-out = 0 s
[2024-02-28 20:12:33] 2024-02-29 01:12:11,061 | INFO     | . log creation = 0 s
[2024-02-28 20:12:33] 2024-02-29 01:12:11,061 | INFO     | ..............................
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | 
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | job summary report
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | --------------------------------------------------
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | PanDA job id: 6130392309
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | task id: NULL
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | errors: (none)
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | status: LOG_TRANSFER = DONE 
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | pilot state: finished 
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | transexitcode: 0
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | exeerrorcode: 0
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | exeerrordiag: 
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | exitcode: 0
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | exitmsg: OK
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | cpuconsumptiontime: 226 s
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | nevents: 2
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | neventsw: 0
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | pid: 682390
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | pgrp: 682390
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | corecount: 4
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | event service: False
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | sizes: {0: 2382345, 2: 2382551, 10: 2382579, 575: 2403384, 576: 2412448, 578: 2412504, 586: 2412854}
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | --------------------------------------------------
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | 
[2024-02-28 20:12:33] 2024-02-29 01:12:11,519 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2024-02-28 20:12:33] 2024-02-29 01:12:11,533 | INFO     | queue jobs had 0 job(s) [purged]
[2024-02-28 20:12:33] 2024-02-29 01:12:11,533 | INFO     | queue payloads had 0 job(s) [purged]
[2024-02-28 20:12:33] 2024-02-29 01:12:11,533 | INFO     | queue data_in had 0 job(s) [purged]
[2024-02-28 20:12:33] 2024-02-29 01:12:11,533 | INFO     | queue data_out had 0 job(s) [purged]
[2024-02-28 20:12:33] 2024-02-29 01:12:11,533 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-02-28 20:12:33] 2024-02-29 01:12:11,533 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-02-28 20:12:33] 2024-02-29 01:12:11,533 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-02-28 20:12:33] 2024-02-29 01:12:11,533 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-02-28 20:12:33] 2024-02-29 01:12:11,533 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-02-28 20:12:33] 2024-02-29 01:12:11,533 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-02-28 20:12:33] 2024-02-29 01:12:11,533 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-02-28 20:12:33] 2024-02-29 01:12:11,533 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-02-28 20:12:33] 2024-02-29 01:12:11,533 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-02-28 20:12:33] 2024-02-29 01:12:11,533 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-02-28 20:12:33] 2024-02-29 01:12:11,533 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-02-28 20:12:33] 2024-02-29 01:12:11,533 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-02-28 20:12:33] 2024-02-29 01:12:11,533 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-02-28 20:12:33] 2024-02-29 01:12:11,533 | INFO     | queue completed_jobids has 1 job(s)
[2024-02-28 20:12:33] 2024-02-29 01:12:11,533 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-02-28 20:12:33] 2024-02-29 01:12:11,533 | INFO     | queue messages had 0 job(s) [purged]
[2024-02-28 20:12:33] 2024-02-29 01:12:11,533 | INFO     | job 6130392309 has completed (purged errors)
[2024-02-28 20:12:33] 2024-02-29 01:12:11,534 | INFO     | overall cleanup function is called
[2024-02-28 20:12:33] 2024-02-29 01:12:12,536 | INFO     | --- collectZombieJob: --- 10, [682390]
[2024-02-28 20:12:33] 2024-02-29 01:12:12,536 | INFO     | zombie collector waiting for pid 682390
[2024-02-28 20:12:33] 2024-02-29 01:12:12,536 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-02-28 20:12:33] 2024-02-29 01:12:13,541 | INFO     | collected zombie processes
[2024-02-28 20:12:33] 2024-02-29 01:12:13,541 | INFO     | will now attempt to kill all subprocesses of pid=682390
[2024-02-28 20:12:33] 2024-02-29 01:12:13,576 | INFO     | process IDs to be killed: [682390] (in reverse order)
[2024-02-28 20:12:33] 2024-02-29 01:12:13,610 | WARNING  | found no corresponding commands to process id(s)
[2024-02-28 20:12:33] 2024-02-29 01:12:13,611 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-02-28 20:12:33] 2024-02-29 01:12:13,613 | INFO     | did not find any defunct processes belonging to 682390
[2024-02-28 20:12:33] 2024-02-29 01:12:13,615 | INFO     | did not find any defunct processes belonging to 682390
[2024-02-28 20:12:33] 2024-02-29 01:12:13,615 | INFO     | ready for new job
[2024-02-28 20:12:33] 2024-02-29 01:12:13,615 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-02-28 20:12:33] 2024-02-29 01:12:13,616 | INFO     | **************************************
[2024-02-28 20:12:33] 2024-02-29 01:12:13,616 | INFO     | ***  PanDA Pilot version 3.7.1.50  ***
[2024-02-28 20:12:33] 2024-02-29 01:12:13,616 | INFO     | **************************************
[2024-02-28 20:12:33] 2024-02-29 01:12:13,616 | INFO     | 
[2024-02-28 20:12:33] 2024-02-29 01:12:13,637 | INFO     | architecture information:
[2024-02-28 20:12:33] 2024-02-29 01:12:13,637 | INFO     | executing command: cat /etc/os-release
[2024-02-28 20:12:33] 2024-02-29 01:12:13,647 | INFO     | cat /etc/os-release:
[2024-02-28 20:12:33] NAME="CentOS Linux"
[2024-02-28 20:12:33] VERSION="7 (Core)"
[2024-02-28 20:12:33] ID="centos"
[2024-02-28 20:12:33] ID_LIKE="rhel fedora"
[2024-02-28 20:12:33] VERSION_ID="7"
[2024-02-28 20:12:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-02-28 20:12:33] ANSI_COLOR="0;31"
[2024-02-28 20:12:33] CPE_NAME="cpe:/o:centos:centos:7"
[2024-02-28 20:12:33] HOME_URL="https://www.centos.org/"
[2024-02-28 20:12:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-02-28 20:12:33] 
[2024-02-28 20:12:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-02-28 20:12:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-02-28 20:12:33] REDHAT_SUPPORT_PRODUCT="centos"
[2024-02-28 20:12:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-02-28 20:12:33] 
[2024-02-28 20:12:33] 2024-02-29 01:12:13,647 | INFO     | **************************************
[2024-02-28 20:12:33] 2024-02-29 01:12:14,150 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2024-02-28 20:12:33] 2024-02-29 01:12:14,163 | INFO     | sufficient remaining disk space (377536643072 B)
[2024-02-28 20:12:33] 2024-02-29 01:12:14,163 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-02-28 20:12:33] 2024-02-29 01:12:14,163 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-02-28 20:12:33] 2024-02-29 01:12:14,163 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-02-28 20:12:33] 2024-02-29 01:12:14,164 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-02-28 20:12:33] 2024-02-29 01:12:14,164 | INFO     | found 0 job(s) in 20 queues
[2024-02-28 20:12:33] 2024-02-29 01:12:14,164 | INFO     | aborting loop
[2024-02-28 20:12:33] 2024-02-29 01:12:14,164 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-02-28 20:12:33] 2024-02-29 01:12:14,164 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-02-28 20:12:33] 2024-02-29 01:12:14,356 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-02-28 20:12:33] 2024-02-29 01:12:14,358 | INFO     | all data control threads have been joined
[2024-02-28 20:12:33] 2024-02-29 01:12:14,372 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-02-28 20:12:33] 2024-02-29 01:12:15,060 | INFO     | all payload control threads have been joined
[2024-02-28 20:12:33] 2024-02-29 01:12:15,168 | INFO     | [job] retrieve thread has finished
[2024-02-28 20:12:33] 2024-02-29 01:12:15,169 | INFO     | [job] job monitor thread has finished
[2024-02-28 20:12:33] 2024-02-29 01:12:15,259 | INFO     | [data] copytool_in thread has finished
[2024-02-28 20:12:33] 2024-02-29 01:12:15,364 | INFO     | [data] control thread has finished
[2024-02-28 20:12:33] 2024-02-29 01:12:15,448 | INFO     | [payload] execute_payloads thread has finished
[2024-02-28 20:12:33] 2024-02-29 01:12:15,520 | INFO     | all job control threads have been joined
[2024-02-28 20:12:33] 2024-02-29 01:12:15,627 | INFO     | [job] validate thread has finished
[2024-02-28 20:12:33] 2024-02-29 01:12:15,703 | INFO     | [job] create_data_payload thread has finished
[2024-02-28 20:12:33] 2024-02-29 01:12:15,804 | INFO     | [payload] validate_pre thread has finished
[2024-02-28 20:12:33] 2024-02-29 01:12:16,064 | INFO     | [payload] control thread has finished
[2024-02-28 20:12:33] 2024-02-29 01:12:16,130 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-02-28 20:12:33] 2024-02-29 01:12:16,361 | INFO     | [data] copytool_out thread has finished
[2024-02-28 20:12:33] 2024-02-29 01:12:16,405 | INFO     | [payload] validate_post thread has finished
[2024-02-28 20:12:33] 2024-02-29 01:12:16,525 | INFO     | [job] control thread has finished
[2024-02-28 20:12:33] 2024-02-29 01:12:16,704 | INFO     | [payload] failed_post thread has finished
[2024-02-28 20:12:33] 2024-02-29 01:12:17,135 | INFO     | [job] queue monitor thread has finished
[2024-02-28 20:12:33] 2024-02-29 01:12:18,376 | INFO     | [data] queue_monitor thread has finished
[2024-02-28 20:12:33] 2024-02-29 01:12:25,151 | INFO     | job.realtimelogging is not enabled
[2024-02-28 20:12:33] 2024-02-29 01:12:26,156 | INFO     | [payload] run_realtimelog thread has finished
[2024-02-28 20:12:33] 2024-02-29 01:12:27,920 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140113587377984)>', '<ExcThread(monitor, started 140113023588096)>']
[2024-02-28 20:12:33] 2024-02-29 01:12:28,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-02-28 20:12:33] 2024-02-29 01:12:28,227 | INFO     | [monitor] control thread has ended
[2024-02-28 20:12:33] 2024-02-29 01:12:32,944 | INFO     | all workflow threads have been joined
[2024-02-28 20:12:33] 2024-02-29 01:12:32,944 | INFO     | end of generic workflow (traces error code: 0)
[2024-02-28 20:12:33] 2024-02-29 01:12:32,944 | INFO     | traces error code: 0
[2024-02-28 20:12:33] 2024-02-29 01:12:32,944 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-02-28 20:12:33] 2024-02-29 01:12:32,979 [wrapper] ==== pilot stdout END ====
[2024-02-28 20:12:33] 2024-02-29 01:12:32,982 [wrapper] ==== wrapper stdout RESUME ====
[2024-02-28 20:12:33] 2024-02-29 01:12:32,986 [wrapper] pilotpid: 675151
[2024-02-28 20:12:33] 2024-02-29 01:12:32,989 [wrapper] Pilot exit status: 0
[2024-02-28 20:12:33] 2024-02-29 01:12:32,996 [wrapper] pandaids: 6130392309
[2024-02-28 20:12:33] 2024-02-29 01:12:33,018 [wrapper] cleanup: SIGTERM to supervisor_pilot  675156 675152
[2024-02-28 20:12:33] 2024-02-29 01:12:33,021 [wrapper] Test setup, not cleaning
[2024-02-28 20:12:33] 2024-02-29 01:12:33,023 [wrapper] ==== wrapper stdout END ====
[2024-02-28 20:12:33] 2024-02-29 01:12:33,025 [wrapper] ==== wrapper stderr END ====
[2024-02-28 20:12:33] 2024-02-29 01:12:33,029 [wrapper] apfmon messages muted
[2024-02-28 20:12:33]  *** Error codes and diagnostics ***
[2024-02-28 20:12:33]     "exeErrorCode": 0,
[2024-02-28 20:12:33]     "exeErrorDiag": "",
[2024-02-28 20:12:33]     "pilotErrorCode": 0,
[2024-02-28 20:12:33]     "pilotErrorDiag": "",
[2024-02-28 20:12:33]  *** Listing of results directory ***
[2024-02-28 20:12:33] total 43056
[2024-02-28 20:12:33] -rwx------ 1 boinc boinc    32496 Feb 28 18:55 runpilot2-wrapper.sh
[2024-02-28 20:12:33] -rw-r--r-- 1 boinc boinc     4388 Feb 28 18:55 queuedata.json
[2024-02-28 20:12:33] -rw-r--r-- 1 boinc boinc   460308 Feb 28 18:55 pilot3.tar.gz
[2024-02-28 20:12:33] -rw-r--r-- 1 boinc boinc      107 Feb 28 20:02 wrapper_26015_x86_64-pc-linux-gnu
[2024-02-28 20:12:33] -rwxr-xr-x 1 boinc boinc     7986 Feb 28 20:02 run_atlas
[2024-02-28 20:12:33] -rw-r--r-- 1 boinc boinc      112 Feb 28 20:02 job.xml
[2024-02-28 20:12:33] -rw-r--r-- 2 boinc boinc    17618 Feb 28 20:02 start_atlas.sh
[2024-02-28 20:12:33] drwxrwx--x 2 boinc boinc     4096 Feb 28 20:02 shared
[2024-02-28 20:12:33] -rw-r--r-- 2 boinc boinc   472021 Feb 28 20:02 input.tar.gz
[2024-02-28 20:12:33] -rw-r--r-- 1 boinc boinc     9363 Feb 28 20:02 init_data.xml
[2024-02-28 20:12:33] -rw-r--r-- 2 boinc boinc 36949600 Feb 28 20:02 EVNT.04972714._000039.pool.root.1
[2024-02-28 20:12:33] -rw-r--r-- 1 boinc boinc        0 Feb 28 20:02 boinc_lockfile
[2024-02-28 20:12:33] -rw-r--r-- 1 boinc boinc     2754 Feb 28 20:02 pandaJob.out
[2024-02-28 20:12:33] -rw------- 1 boinc boinc      424 Feb 28 20:02 setup.sh.local
[2024-02-28 20:12:33] -rw------- 1 boinc boinc   968809 Feb 28 20:02 agis_schedconf.cvmfs.json
[2024-02-28 20:12:33] -rw------- 1 boinc boinc        0 Feb 28 20:02 agis_ddmendpoints.agis.ALL.json
[2024-02-28 20:12:33] -rw------- 1 boinc boinc  1318137 Feb 28 20:02 cric_ddmendpoints.json
[2024-02-28 20:12:33] drwx------ 4 boinc boinc     4096 Feb 28 20:02 pilot3
[2024-02-28 20:12:33] -rw------- 1 boinc boinc  1577688 Feb 28 20:11 output.1.f18e63d5-fdfa-4cd0-b6c7-c9392faab7c4_73186.pool.root
[2024-02-28 20:12:33] -rw-r--r-- 1 boinc boinc      532 Feb 28 20:11 boinc_task_state.xml
[2024-02-28 20:12:33] -rw------- 1 boinc boinc     1002 Feb 28 20:11 memory_monitor_summary.json
[2024-02-28 20:12:33] -rw------- 1 boinc boinc   153816 Feb 28 20:12 f18e63d5-fdfa-4cd0-b6c7-c9392faab7c4_73186.1.job.log.tgz
[2024-02-28 20:12:33] -rw------- 1 boinc boinc       95 Feb 28 20:12 pilot_heartbeat.json
[2024-02-28 20:12:33] -rw------- 1 boinc boinc     7320 Feb 28 20:12 heartbeat.json
[2024-02-28 20:12:33] -rw-r--r-- 1 boinc boinc       24 Feb 28 20:12 wrapper_checkpoint.txt
[2024-02-28 20:12:33] -rw-r--r-- 1 boinc boinc     8192 Feb 28 20:12 boinc_mmap_file
[2024-02-28 20:12:33] -rw------- 1 boinc boinc     4418 Feb 28 20:12 pilotlog.txt
[2024-02-28 20:12:33] -rw------- 1 boinc boinc   109417 Feb 28 20:12 f18e63d5-fdfa-4cd0-b6c7-c9392faab7c4_73186.1.job.log
[2024-02-28 20:12:33] -rw------- 1 boinc boinc      464 Feb 28 20:12 output.list
[2024-02-28 20:12:33] -rw-r--r-- 1 boinc boinc      748 Feb 28 20:12 runtime_log
[2024-02-28 20:12:33] -rw------- 1 boinc boinc  1863680 Feb 28 20:12 result.tar.gz
[2024-02-28 20:12:33] -rw-r--r-- 1 boinc boinc    12080 Feb 28 20:12 runtime_log.err
[2024-02-28 20:12:33] -rw------- 1 boinc boinc      623 Feb 28 20:12 1uqNDm5wiz4n7Olcko1bjSoqABFKDmABFKDmyeZQDm8FLKDmK0XQWo.diag
[2024-02-28 20:12:33] -rw-r--r-- 1 boinc boinc    21236 Feb 28 20:12 stderr.txt
[2024-02-28 20:12:33] HITS file was successfully produced:
[2024-02-28 20:12:33] -rw------- 1 boinc boinc 1577688 Feb 28 20:11 shared/HITS.pool.root.1
[2024-02-28 20:12:33]  *** Contents of shared directory: ***
[2024-02-28 20:12:33] total 39932
[2024-02-28 20:12:33] -rw-r--r-- 2 boinc boinc    17618 Feb 28 20:02 start_atlas.sh
[2024-02-28 20:12:33] -rw-r--r-- 2 boinc boinc   472021 Feb 28 20:02 input.tar.gz
[2024-02-28 20:12:33] -rw-r--r-- 2 boinc boinc 36949600 Feb 28 20:02 ATLAS.root_0
[2024-02-28 20:12:33] -rw------- 1 boinc boinc  1577688 Feb 28 20:11 HITS.pool.root.1
[2024-02-28 20:12:33] -rw------- 1 boinc boinc  1863680 Feb 28 20:12 result.tar.gz
20:12:34 (671390): run_atlas exited; CPU time 224.867785
20:12:34 (671390): called boinc_finish(0)

</stderr_txt>
]]>

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