Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:39:35 (22054): wrapper (7.7.26015): starting
11:39:35 (22054): wrapper: running run_atlas (--nthreads 8)
[2025-06-30 11:39:35] Arguments: --nthreads 8
[2025-06-30 11:39:35] Threads: 8
[2025-06-30 11:39:35] Checking for CVMFS
[2025-06-30 11:39:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-30 11:39:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-30 11:39:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-30 11:39:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-30 11:39:37] 2.12.6.0 26100 184544 71256 147753 1 1 2909931 4096000 0 130560 0 146763551 99.831 39560152 934 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-06-30 11:39:37] CVMFS is ok
[2025-06-30 11:39:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-30 11:39:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-30 11:39:37] Small home clusters do not require a local http proxy but it is suggested if
[2025-06-30 11:39:37] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-06-30 11:39:37] Further information can be found at the LHC@home message board.
[2025-06-30 11:39:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-30 11:39:37] Checking for apptainer binary...
[2025-06-30 11:39:37] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-06-30 11:39:37] apptainer is not installed, using version from CVMFS
[2025-06-30 11:39:37] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-30 11:39:46] knuth.rechenkraft.net
[2025-06-30 11:39:46] apptainer works
[2025-06-30 11:39:47] Set ATHENA_PROC_NUMBER=8
[2025-06-30 11:39:47] Set ATHENA_CORE_NUMBER=8
[2025-06-30 11:39:47] Starting ATLAS job with PandaID=6713804967
[2025-06-30 11:39:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-30 11:45:15]  *** The last 200 lines of the pilot log: ***
[2025-06-30 11:45:15] 2025-06-30 09:45:01,339 | WARNING  | found no stored workdir sizes
[2025-06-30 11:45:15] 2025-06-30 09:45:01,339 | INFO     | will not add max space = 0 B to job metrics
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | could have reported an average CPU frequency of 3565 MHz (4 samples)
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | ..............................
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . Timing measurements:
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . get job = 0 s
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . initial setup = 14 s
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . payload setup = 18 s
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . stage-in = 0 s
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . payload execution = 1 s
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . stage-out = 0 s
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . log creation = 0 s
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | ..............................
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/7/PanDA_Pilot-6713804967/pilotlog.txt
[2025-06-30 11:45:15] 2025-06-30 09:45:01,346 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-30 11:45:15] - Log from pilotlog.txt -
[2025-06-30 11:45:15] 2025-06-30 09:45:00,486 | INFO     | PID=27424 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC-TEST -i ALRB
[2025-06-30 11:45:15] 2025-06-30 09:45:01,337 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-30 11:45:15] 2025-06-30 09:45:01,338 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3566.0927499999993
[2025-06-30 11:45:15] 2025-06-30 09:45:01,339 | WARNING  | file does not exist either: /var/lib/boinc/slots/7/PanDA_Pilot-6713804967/memory_monitor_output.txt
[2025-06-30 11:45:15] 2025-06-30 09:45:01,339 | INFO     | memory summary dictionary not yet available
[2025-06-30 11:45:15] 2025-06-30 09:45:01,339 | WARNING  | found no stored workdir sizes
[2025-06-30 11:45:15] 2025-06-30 09:45:01,339 | INFO     | will not add max space = 0 B to job metrics
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | could have reported an average CPU frequency of 3565 MHz (4 samples)
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | ..............................
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . Timing measurements:
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . get job = 0 s
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . initial setup = 14 s
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . payload setup = 18 s
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . stage-in = 0 s
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . payload execution = 1 s
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . stage-out = 0 s
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . log creation = 0 s
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | ..............................
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/7/PanDA_Pilot-6713804967/pilotlog.txt
[2025-06-30 11:45:15] 2025-06-30 09:45:01,346 | WARNING  | 
[2025-06-30 11:45:15] [begin log extracts]
[2025-06-30 11:45:15] - Log from pilotlog.txt -
[2025-06-30 11:45:15] 2025-06-30 09:45:00,486 | INFO     | PID=27424 has CPU usage=0.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC-TEST -i ALRB
[2025-06-30 11:45:15] 2025-06-30 09:45:01,337 | INFO     | CPU arch script returned: x86-64-v2
[2025-06-30 11:45:15] 2025-06-30 09:45:01,338 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3566.0927499999993
[2025-06-30 11:45:15] 2025-06-30 09:45:01,339 | WARNING  | file does not exist either: /var/lib/boinc/slots/7/PanDA_Pilot-6713804967/memory_monitor_output.txt
[2025-06-30 11:45:15] 2025-06-30 09:45:01,339 | INFO     | memory summary dictionary not yet available
[2025-06-30 11:45:15] 2025-06-30 09:45:01,339 | WARNING  | found no stored workdir sizes
[2025-06-30 11:45:15] 2025-06-30 09:45:01,339 | INFO     | will not add max space = 0 B to job metrics
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | could have reported an average CPU frequency of 3565 MHz (4 samples)
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | ..............................
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . Timing measurements:
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . get job = 0 s
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . initial setup = 14 s
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . payload setup = 18 s
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . stage-in = 0 s
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . payload execution = 1 s
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . stage-out = 0 s
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | . log creation = 0 s
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | ..............................
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-30 11:45:15] 2025-06-30 09:45:01,340 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/7/PanDA_Pilot-6713804967/pilotlog.txt
[2025-06-30 11:45:15] [end log extracts]
[2025-06-30 11:45:15] 2025-06-30 09:45:01,346 | WARNING  | pilotErrorCodes = [1305, 1187] (will report primary/first error code)
[2025-06-30 11:45:15] 2025-06-30 09:45:01,347 | WARNING  | pilotErrorDiags = ['Failed to execute payload:/bin/bash: Gen_tf.py: command not found', 'Payload metadata does not exist'] (will report primary/first error diag)
[2025-06-30 11:45:15] 2025-06-30 09:45:01,663 | INFO     | 
[2025-06-30 11:45:15] 2025-06-30 09:45:01,663 | INFO     | job summary report
[2025-06-30 11:45:15] 2025-06-30 09:45:01,663 | INFO     | --------------------------------------------------
[2025-06-30 11:45:15] 2025-06-30 09:45:01,663 | INFO     | PanDA job id: 6713804967
[2025-06-30 11:45:15] 2025-06-30 09:45:01,663 | INFO     | task id: NULL
[2025-06-30 11:45:15] 2025-06-30 09:45:01,663 | INFO     | error 1/2: 1305: Failed to execute payload:/bin/bash: Gen_tf.py: command not found
[2025-06-30 11:45:15] 
[2025-06-30 11:45:15] 2025-06-30 09:45:01,663 | INFO     | error 2/2: 1187: Payload metadata does not exist
[2025-06-30 11:45:15] 2025-06-30 09:45:01,663 | INFO     | pilot error code: 1187
[2025-06-30 11:45:15] 2025-06-30 09:45:01,663 | INFO     | pilot error diag: metadata does not exist: /var/lib/boinc/slots/7/PanDA_Pilot-6713804967/metadata.xml
[2025-06-30 11:45:15] 2025-06-30 09:45:01,663 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-30 11:45:15] 2025-06-30 09:45:01,663 | INFO     | pilot state: failed 
[2025-06-30 11:45:15] 2025-06-30 09:45:01,664 | INFO     | transexitcode: 127
[2025-06-30 11:45:15] 2025-06-30 09:45:01,664 | INFO     | exeerrorcode: 0
[2025-06-30 11:45:15] 2025-06-30 09:45:01,664 | INFO     | exeerrordiag: 
[2025-06-30 11:45:15] 2025-06-30 09:45:01,664 | INFO     | exitcode: 0
[2025-06-30 11:45:15] 2025-06-30 09:45:01,664 | INFO     | exitmsg: 
[2025-06-30 11:45:15] 2025-06-30 09:45:01,664 | INFO     | cpuconsumptiontime: 5 s
[2025-06-30 11:45:15] 2025-06-30 09:45:01,664 | INFO     | nevents: 0
[2025-06-30 11:45:15] 2025-06-30 09:45:01,664 | INFO     | neventsw: 0
[2025-06-30 11:45:15] 2025-06-30 09:45:01,664 | INFO     | pid: 725
[2025-06-30 11:45:15] 2025-06-30 09:45:01,664 | INFO     | pgrp: 725
[2025-06-30 11:45:15] 2025-06-30 09:45:01,664 | INFO     | corecount: 8
[2025-06-30 11:45:15] 2025-06-30 09:45:01,664 | INFO     | event service: False
[2025-06-30 11:45:15] 2025-06-30 09:45:01,664 | INFO     | sizes: {0: 2364556, 1: 2365412, 4: 2365674, 12: 2365702, 85: 2370048, 86: 2374382, 88: 2374538, 208: 2374534}
[2025-06-30 11:45:15] 2025-06-30 09:45:01,664 | INFO     | --------------------------------------------------
[2025-06-30 11:45:15] 2025-06-30 09:45:01,664 | INFO     | 
[2025-06-30 11:45:15] 2025-06-30 09:45:01,665 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-30 11:45:15] 2025-06-30 09:45:01,673 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-30 11:45:15] 2025-06-30 09:45:01,673 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-30 11:45:15] 2025-06-30 09:45:01,673 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-30 11:45:15] 2025-06-30 09:45:01,674 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-30 11:45:15] 2025-06-30 09:45:01,674 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-30 11:45:15] 2025-06-30 09:45:01,674 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-30 11:45:15] 2025-06-30 09:45:01,674 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-30 11:45:15] 2025-06-30 09:45:01,674 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-30 11:45:15] 2025-06-30 09:45:01,674 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-30 11:45:15] 2025-06-30 09:45:01,674 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-30 11:45:15] 2025-06-30 09:45:01,674 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-30 11:45:15] 2025-06-30 09:45:01,674 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-30 11:45:15] 2025-06-30 09:45:01,674 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-30 11:45:15] 2025-06-30 09:45:01,674 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-30 11:45:15] 2025-06-30 09:45:01,674 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-30 11:45:15] 2025-06-30 09:45:01,674 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-30 11:45:15] 2025-06-30 09:45:01,674 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-30 11:45:15] 2025-06-30 09:45:01,675 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-30 11:45:15] 2025-06-30 09:45:01,675 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-30 11:45:15] 2025-06-30 09:45:01,675 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-30 11:45:15] 2025-06-30 09:45:01,675 | INFO     | job 6713804967 has completed (purged errors)
[2025-06-30 11:45:15] 2025-06-30 09:45:01,675 | INFO     | overall cleanup function is called
[2025-06-30 11:45:15] 2025-06-30 09:45:02,678 | INFO     | --- collectZombieJob: --- 10, [725]
[2025-06-30 11:45:15] 2025-06-30 09:45:02,678 | INFO     | zombie collector waiting for pid 725
[2025-06-30 11:45:15] 2025-06-30 09:45:02,678 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-30 11:45:15] 2025-06-30 09:45:02,678 | INFO     | collected zombie processes
[2025-06-30 11:45:15] 2025-06-30 09:45:02,679 | INFO     | will attempt to kill all subprocesses of pid=725
[2025-06-30 11:45:15] 2025-06-30 09:45:02,724 | INFO     | process IDs to be killed: [725] (in reverse order)
[2025-06-30 11:45:15] 2025-06-30 09:45:02,746 | WARNING  | found no corresponding commands to process id(s)
[2025-06-30 11:45:15] 2025-06-30 09:45:02,746 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-30 11:45:15] 2025-06-30 09:45:02,748 | INFO     | did not find any defunct processes belonging to 725
[2025-06-30 11:45:15] 2025-06-30 09:45:02,749 | INFO     | did not find any defunct processes belonging to 725
[2025-06-30 11:45:15] 2025-06-30 09:45:02,749 | INFO     | ready for new job
[2025-06-30 11:45:15] 2025-06-30 09:45:02,749 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-30 11:45:15] 2025-06-30 09:45:02,750 | INFO     | ***************************************
[2025-06-30 11:45:15] 2025-06-30 09:45:02,750 | INFO     | ***  PanDA Pilot version 3.10.4.12  ***
[2025-06-30 11:45:15] 2025-06-30 09:45:02,750 | INFO     | ***************************************
[2025-06-30 11:45:15] 2025-06-30 09:45:02,750 | INFO     | 
[2025-06-30 11:45:15] 2025-06-30 09:45:02,750 | INFO     | architecture information:
[2025-06-30 11:45:15] 2025-06-30 09:45:02,751 | INFO     | executing command: cat /etc/os-release
[2025-06-30 11:45:15] 2025-06-30 09:45:02,756 | INFO     | cat /etc/os-release:
[2025-06-30 11:45:15] NAME="CentOS Linux"
[2025-06-30 11:45:15] VERSION="7 (Core)"
[2025-06-30 11:45:15] ID="centos"
[2025-06-30 11:45:15] ID_LIKE="rhel fedora"
[2025-06-30 11:45:15] VERSION_ID="7"
[2025-06-30 11:45:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-30 11:45:15] ANSI_COLOR="0;31"
[2025-06-30 11:45:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-30 11:45:15] HOME_URL="https://www.centos.org/"
[2025-06-30 11:45:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-30 11:45:15] 
[2025-06-30 11:45:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-30 11:45:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-30 11:45:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-30 11:45:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-30 11:45:15] 
[2025-06-30 11:45:15] 2025-06-30 09:45:02,756 | INFO     | ***************************************
[2025-06-30 11:45:15] 2025-06-30 09:45:03,258 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-30 11:45:15] 2025-06-30 09:45:03,266 | INFO     | sufficient remaining disk space (512937164800 B)
[2025-06-30 11:45:15] 2025-06-30 09:45:03,266 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-30 11:45:15] 2025-06-30 09:45:03,266 | INFO     | current server update state: UPDATING_FINAL
[2025-06-30 11:45:15] 2025-06-30 09:45:03,266 | INFO     | update_server=False
[2025-06-30 11:45:15] 2025-06-30 09:45:03,266 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-30 11:45:15] 2025-06-30 09:45:03,267 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-30 11:45:15] 2025-06-30 09:45:03,267 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-30 11:45:15] 2025-06-30 09:45:03,267 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-30 11:45:15] 2025-06-30 09:45:03,267 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-30 11:45:15] 2025-06-30 09:45:03,267 | INFO     | found 0 job(s) in 20 queues
[2025-06-30 11:45:15] 2025-06-30 09:45:03,267 | INFO     | aborting loop
[2025-06-30 11:45:15] 2025-06-30 09:45:03,267 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-30 11:45:15] 2025-06-30 09:45:03,268 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-30 11:45:15] 2025-06-30 09:45:03,977 | INFO     | all job control threads have been joined
[2025-06-30 11:45:15] 2025-06-30 09:45:04,271 | INFO     | [job] retrieve thread has finished
[2025-06-30 11:45:15] 2025-06-30 09:45:04,272 | INFO     | [job] queue monitor thread has finished
[2025-06-30 11:45:15] 2025-06-30 09:45:04,272 | INFO     | [job] job monitor thread has finished
[2025-06-30 11:45:15] 2025-06-30 09:45:04,292 | INFO     | [payload] execute_payloads thread has finished
[2025-06-30 11:45:15] 2025-06-30 09:45:04,368 | INFO     | all data control threads have been joined
[2025-06-30 11:45:15] 2025-06-30 09:45:04,667 | INFO     | [payload] failed_post thread has finished
[2025-06-30 11:45:15] 2025-06-30 09:45:04,713 | INFO     | all payload control threads have been joined
[2025-06-30 11:45:15] 2025-06-30 09:45:04,743 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-30 11:45:15] 2025-06-30 09:45:04,769 | INFO     | [job] validate thread has finished
[2025-06-30 11:45:15] 2025-06-30 09:45:04,899 | INFO     | [job] create_data_payload thread has finished
[2025-06-30 11:45:15] 2025-06-30 09:45:04,982 | INFO     | [job] control thread has finished
[2025-06-30 11:45:15] 2025-06-30 09:45:04,990 | INFO     | [payload] validate_pre thread has finished
[2025-06-30 11:45:15] 2025-06-30 09:45:05,111 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-30 11:45:15] 2025-06-30 09:45:05,272 | INFO     | [data] copytool_out thread has finished
[2025-06-30 11:45:15] 2025-06-30 09:45:05,333 | INFO     | [data] copytool_in thread has finished
[2025-06-30 11:45:15] 2025-06-30 09:45:05,374 | INFO     | [data] control thread has finished
[2025-06-30 11:45:15] 2025-06-30 09:45:05,469 | INFO     | [payload] validate_post thread has finished
[2025-06-30 11:45:15] 2025-06-30 09:45:05,995 | INFO     | [payload] control thread has finished
[2025-06-30 11:45:15] 2025-06-30 09:45:08,994 | INFO     | [data] queue_monitor thread has finished
[2025-06-30 11:45:15] 2025-06-30 09:45:09,825 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139904579708736)>', '<ExcThread(monitor, started 139903903975168)>']
[2025-06-30 11:45:15] 2025-06-30 09:45:10,297 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-30 11:45:15] 2025-06-30 09:45:10,297 | INFO     | [monitor] control thread has ended
[2025-06-30 11:45:15] 2025-06-30 09:45:14,829 | INFO     | all workflow threads have been joined
[2025-06-30 11:45:15] 2025-06-30 09:45:14,829 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-30 11:45:15] 2025-06-30 09:45:14,829 | INFO     | traces error code: 0
[2025-06-30 11:45:15] 2025-06-30 09:45:14,829 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-30 11:45:15] 2025-06-30 09:45:14,900 [wrapper] ==== pilot stdout END ====
[2025-06-30 11:45:15] 2025-06-30 09:45:14,901 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-30 11:45:15] 2025-06-30 09:45:14,902 [wrapper] pilotpid: 27424
[2025-06-30 11:45:15] 2025-06-30 09:45:14,903 [wrapper] Pilot exit status: 0
[2025-06-30 11:45:15] 2025-06-30 09:45:15,169 [wrapper] pandaids: 6713804967
[2025-06-30 11:45:15] 2025-06-30 09:45:15,182 [wrapper] cleanup supervisor_pilot 27430 27425
[2025-06-30 11:45:15] 2025-06-30 09:45:15,183 [wrapper] Test setup, not cleaning
[2025-06-30 11:45:15] 2025-06-30 09:45:15,184 [wrapper] apfmon messages muted
[2025-06-30 11:45:15] 2025-06-30 09:45:15,185 [wrapper] ==== wrapper stdout END ====
[2025-06-30 11:45:15] 2025-06-30 09:45:15,187 [wrapper] ==== wrapper stderr END ====
[2025-06-30 11:45:15]  *** Error codes and diagnostics ***
[2025-06-30 11:45:15]     "exeErrorCode": 0,
[2025-06-30 11:45:15]     "exeErrorDiag": "",
[2025-06-30 11:45:15]     "pilotErrorCode": 1305,
[2025-06-30 11:45:15]     "pilotErrorDiag": "Failed to execute payload:/bin/bash: Gen_tf.py: command not found",
[2025-06-30 11:45:15]  *** Listing of results directory ***
[2025-06-30 11:45:15] total 46456
[2025-06-30 11:45:15] -rw-r--r-- 1 boinc boinc 21835578 Jun 23 20:11 TXT.43313123._000103.tar.gz.1
[2025-06-30 11:45:15] -rwx------ 1 boinc boinc    36243 Jun 30 10:55 runpilot2-wrapper.sh
[2025-06-30 11:45:15] -rw-r--r-- 1 boinc boinc     4402 Jun 30 10:55 queuedata.json
[2025-06-30 11:45:15] -rw-r--r-- 1 boinc boinc   530466 Jun 30 10:55 pilot3.tar.gz
[2025-06-30 11:45:15] -rw-r--r-- 1 boinc boinc      107 Jun 30 11:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-30 11:45:15] -rwxr-xr-x 1 boinc boinc     7986 Jun 30 11:39 run_atlas
[2025-06-30 11:45:15] -rw-r--r-- 1 boinc boinc      112 Jun 30 11:39 job.xml
[2025-06-30 11:45:15] -rw-r--r-- 2 boinc boinc 22268578 Jun 30 11:39 input.tar.gz
[2025-06-30 11:45:15] -rw-r--r-- 2 boinc boinc    17588 Jun 30 11:39 start_atlas.sh
[2025-06-30 11:45:15] drwxrwx--x 2 boinc boinc     4096 Jun 30 11:39 shared
[2025-06-30 11:45:15] -rw-r--r-- 1 boinc boinc     6245 Jun 30 11:39 init_data.xml
[2025-06-30 11:45:15] -rw-r--r-- 1 boinc boinc        0 Jun 30 11:39 boinc_lockfile
[2025-06-30 11:45:15] -rw-r--r-- 1 boinc boinc     2223 Jun 30 11:39 pandaJob.out
[2025-06-30 11:45:15] -rw------- 1 boinc boinc      424 Jun 30 11:39 setup.sh.local
[2025-06-30 11:45:15] -rw------- 1 boinc boinc   970700 Jun 30 11:41 agis_schedconf.cvmfs.json
[2025-06-30 11:45:15] -rw------- 1 boinc boinc  1574086 Jun 30 11:41 agis_ddmendpoints.agis.ALL.json
[2025-06-30 11:45:15] drwx------ 4 boinc boinc     4096 Jun 30 11:41 pilot3
[2025-06-30 11:45:15] -rw------- 1 boinc boinc     7839 Jun 30 11:42 ec47a6a3-b1e1-46bc-9881-f3a07e603cd6_96130.1.job.log.tgz
[2025-06-30 11:45:15] -rw------- 1 boinc boinc       95 Jun 30 11:44 pilot_heartbeat.json
[2025-06-30 11:45:15] -rw------- 1 boinc boinc     2277 Jun 30 11:45 heartbeat.json
[2025-06-30 11:45:15] -rw-r--r-- 1 boinc boinc     8192 Jun 30 11:45 boinc_mmap_file
[2025-06-30 11:45:15] -rw-r--r-- 1 boinc boinc       22 Jun 30 11:45 wrapper_checkpoint.txt
[2025-06-30 11:45:15] -rw-r--r-- 1 boinc boinc      528 Jun 30 11:45 boinc_task_state.xml
[2025-06-30 11:45:15] -rw------- 1 boinc boinc     4481 Jun 30 11:45 pilotlog.txt
[2025-06-30 11:45:15] -rw------- 1 boinc boinc    80044 Jun 30 11:45 ec47a6a3-b1e1-46bc-9881-f3a07e603cd6_96130.1.job.log
[2025-06-30 11:45:15] -rw------- 1 boinc boinc      227 Jun 30 11:45 output.list
[2025-06-30 11:45:15] -rw-r--r-- 1 boinc boinc      856 Jun 30 11:45 runtime_log
[2025-06-30 11:45:15] -rw------- 1 boinc boinc   102400 Jun 30 11:45 result.tar.gz
[2025-06-30 11:45:15] -rw-r--r-- 1 boinc boinc    11405 Jun 30 11:45 runtime_log.err
[2025-06-30 11:45:15] -rw------- 1 boinc boinc      634 Jun 30 11:45 cVKLDmlTPq7n7OlckoGmwREmGgkVDo1bjSoqwWGKDmdKFKDmJdENrm.diag
[2025-06-30 11:45:15] -rw-r--r-- 1 boinc boinc    21797 Jun 30 11:45 stderr.txt
[2025-06-30 11:45:15] No HITS result produced
[2025-06-30 11:45:15]  *** Contents of shared directory: ***
[2025-06-30 11:45:15] total 21868
[2025-06-30 11:45:15] -rw-r--r-- 2 boinc boinc 22268578 Jun 30 11:39 input.tar.gz
[2025-06-30 11:45:15] -rw-r--r-- 2 boinc boinc    17588 Jun 30 11:39 start_atlas.sh
[2025-06-30 11:45:15] -rw------- 1 boinc boinc   102400 Jun 30 11:45 result.tar.gz
11:45:16 (22054): run_atlas exited; CPU time 13.363595
11:45:16 (22054): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN